Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        --------->HSFB2a(1)                                                                     <---------TOE1(2)                                                                     ------->TEIL                                                                     --------->SPL7                         --------->YAB1                             <---------CCA1(2)              --------->MYB52(1)                                 --------------->AtSPL3              ------->TEIL         --------->ANAC58              <---------------AtSPL3        <-------TEIL   --------->AHL20(2)                        --------------->AtSPL8     ------>MYB46(1)  <---------AHL20(2)                     --------->LBD16                    -----     ------>MYB83  <---------ARR14(2)      --------->LBD16 <---------LBD16                   <-------   <---------MYB59 --------->ARR14(2)  --------->MYB52(1) --------->MYB52(1)         <----------DOF2 -----------GT1<---------LBD16     --------->ANAC58      <-----------GT1             <---------DAG2 < -------MYB52(2) --------->LBD16 ---------->DOF2         --------->MYB52(1)      <------NtERF2-------   aataaccaaattcatgtaccggatttaaaataactaaaagcaaaccgcataattcgaaataaccggactcgtaccttcttggccgaactttttgagattc  3737900                                                                <-------MYC2                                                                ------->MYC2                                                                ------->PIF5                                                                ------->MYC3                                                                ------->MYC4                                                                <-------MYC4                                                                <-------PIF5                                                                <-------MYC3                                                               <--------ABF1                                                               --------->O2                                                               <---------O2                                                               <---------ANAC55(2)                                                               --------->TGA1a                                                               <---------TGA1a                                                               --------->ANAC55(2)                                                               <<<<<<<<<<HY5                                                               --------->bZIP60(2)                                <---------ARR14(2)             <<<<<<<<<<AtMYC2        --------->ALFIN1                               <------ZmHOX2a(1)               <<<<<<<<<<ABI5          <---------ZAT6                         <---------HSFB2a(2)                  ------>NtERF2            <-----------RAV1(1)               <---------MYB52(1)        <---------ANAC46    <---------ALFIN1     >>>>>>>>>>>>>>>>>LFY  ====================================HOX2a_HOX2a          ==============MYC_MYB  ----------->RAV1(1)  ------>ZmHOX2a(2)      --------->HSFB2a(2)               ------->GAMYB          ------->TEIL  =================================HOX2a_HOX2a            --------->ANAC46     --------->ANAC58 ---------------->WRI1   <-----------RAV1(2)     --------->GLK1(2)             --------->ANAC46 --GLK1(2)--------->DEAR3(1)<------ZmHOX2a(1)   <---------GLK1(2)              --------->ANAC58 ---------ARR11(3)<---------TOE2(3)      --------->ALFIN1 --------->ANAC58 --------->HSFB2a(2) -->GLK1(2)------>NtERF2 <---------LBD16 <---------REM1(1)--------->ANAC58 <---------HSFB2a(2)     <-   ttgatctcttcgacgacgttaagttttccaggaggaactcgaggtgtagagattctgacaacgccacgtgtctcgttctcgacgcaccagtgttggataa  3738000                                                           ----------->HVH21                                                         --------->bZIP60(1)                   <---------REM1(1)                     --------->O2                 <---------ANAC46                        <---------bZIP60(1)                 <---------ANAC58                        <---------TGA1a                 <------MYB46(1)                         --------->TGA1a                 <---------ANAC55(1)                     <---------O2                 <---------ANAC58                        ============================bZIP_DOF                <---------AtMYB61                        <---------bZIP60(2)                --------->MYB59                          <---------ANAC58                --------->MYB111(2)                      <---------ANAC58                --------->MYB111(1)                      <---------ANAC55(2)                --------->MYB52(2)                       <---------ANAC46                --------->MYB46(2)                    ----------->TGA1               <---------MYB55(1)                     ----------->HVH21             <-------GAMYB                          <---------ANAC58            <---------MYB46(3)                      <---------ANAC46          ------->MYC3     ------>ZmHOX2a(2)        <---------ANAC58                     <---------TOE1(3)          <-------MYC2    <------ZmHOX2a(2)      <---------ANAC58               --------->ANAC46          <-------MYC3   --------->ARR14(2)      <---------ANAC58             <---------ANAC58          ------->MYC2   <---------ARR14(2)   =====================MYC_MYB<----------DOF2<---------TOE2(3) <------NtERF2<---------MYB52(1)              <--------P --------->ANAC55(2)  <---------ANAC58    --- --------DEAR3(1)<------MYB83      --------->MYB52(1)<-----------HVH21   <---------DAG2 <-----------GT1   gacggcgaagcatgtggttaggtgtaagatcggagtctaagggaagaggttgcttcgtgacgggacaagaagggaccttttcgagccatttaacgatgtt  3738100                                    <---------AGP1                                    <---------ARR11(3)                            --------->GLK1(2)                                    --------->ARR11(3)                           <---------GLK1(2)                                    <---------ARR14(2)                          <------ZmHOX2a(1)                             ----------->HVH21                                  =====================                           <---------ANAC58                                     =================HOX2a_HOX2a                           <---------MYB46(3)   ------>ZmHOX2a(2)             --------->MYB59                           <---------ANAC58   --------->ARR11(3)            --------->ICU4                     --------->MYB52(1)       <---------ARR11(3)         --------->AHL20(2)                    <---------ARR14(2)    --------->YAB1               ----------->GT1                    --------->ARR14(2) <----------DOF2                --------->DAG2             ----              --------->bZIP60(1)   --------->ARR14(2)               ---------->DOF2             ====              <---------bZIP60(1)  <---------CCA1(2)              --------->At4g35610     ------>ZmHOX2a(2) -------->HVH21 ----------------->AGL1------>ZmHOX2a(2)           <---------At4g35610     ===========   ttgacggtcgtaagtgatgccagaaacggtcgtgactggatctttcatgatctctagtgagattgggcagataaagtaattaggaatctcgatctcttcc  3738200                       --------->TOE1(2)                         --------->HSFB2a(2)             <---------LBD16                                <---------YAB1        <---------------AGL15                             --------->YAB1        --------------->AGL15                <---------ARR11(3)  <---------HSFB2a(2)       ----------------->AGL1                --------->ARR11(3) ------>ZmHOX2a(2)       ----------------->AGL2        ------->TEIL         <---------ICU4       <-----------------AGL2    --------------->AtSPL8   -------->HAHB4       ----------------->AGL3    <---------------AtSPL8  <---------YAB1        --------->ICU4       ------>ZmHOX2a(2)    --------->ARR11(3)           --------->ICU4      ---------->DOF2       <-----------------AGL3    <---------------AtSPL3--------->YAB1  --------->YAB1 =============HOX2a_HOX2a <---------YAB1     --------->AHL20(1)*TSS --------->YAB1 -->ZmHOX2a(1)         --------->TOE2(2) ------->TEIL <---------AHL20(2)  --------->YAB1 =============HOX2a_HOX2a<---------TOE2(2)  <---------AHL20(2)--------->ARR11(3) ===HOX2a_HOX2a----------->GT1  <---------ANAC46 <-------TEIL <---------ARR11(3)       >>>>>>>>>TBF1   tcttcttgatccatttgtggaaaaacgtatgattttgtgtacgtatatatattcatataatgatgatctagaataatagtaaagatgaagaagaagagaa  3738300                                 --------->ANAC55(2)                           <---------ANAC46                          <------NtERF2                         ------>NtERF2                        <---------ARR14(2)                        --------->ARR14(2)                       --------->ATERF1(1)                       <------NtERF2                       <---------ZAT2                       <---------At4g35610                       --------->RAP2.3(1)                       --------->At4g35610                       <---------ABI4(2)                      <---------ORA47(2)                      <<<<<<<<<AtERF-2                      <---------DEAR3(2)                      <<<<<<<<<AtERF-4                      <<<<<<<<<AtERF-1                      <---------RAP2.3(1)                      ------>NtERF2<---------AHL20(2)                      <<<<<<<<<AtERF-5                      <<<<<<<<<AtERF-7                      <<<<<<<<<AtERF-3                      <---------ATERF1(1)                      <---------RRTF1(1)                      <---------ERF1--------->ATHB12                     <---------DREB2C(2)                     <---------RRTF1(2)                     <---------RRTF1(3)                     <---------RAP2.3(3)                     <---------RAP2.3(2)                     <---------ANAC58                     <---------ANAC46 <---------WOX13(1)                     <---------ANAC58<------------CBF                     <---------RAP2.6(2)   <---------ANAC46  <---------DEAR3(1)  <---------AtMYB61  <---------ATERF1(2)                                                          ---  --------->ALFIN1  --------->RAP2.6(3)                                                     <-------- <-------MYC3--------->ANAC58<---------MYB52(1)              <---------MYB52(2)  ---------->DOF2 ---- ------->MYC3--------->ANAC58--------->DOF5.7(2) <----------DOF2                 ====================   acatgtggtggaagtaagaaatggcggctccgtttacttaattggtcttcgcttttgaattccactaacatatgttttttagacaaagaaatattcacta  3738400           ------->MYC4           ------->MYC2           <-------MYC4           <-------MYC2           <-------MYC3           ------->MYC3           -------->ABF1          --------->ANAC55(2)          --------->TGA1a                                                                           <          <--------ABF1                                                                          <---          --------->O2                                                                         ------          <---------O2                                        --------->AHL20(2)               ------          <---------ANAC55(2)                        <---------ARR14(2)                        <-----     ----------->HVH21                               --------->ARR14(2)                        <-----   <---------ICU4                                 --------->ANAC55(2)     <---------AHL20(2)  ------- ------>YAB1        <---------AHL20(2)   <-----------GT1      <---------AHL20(2)            <-------- ---GT1   <---------TGA1a     <---------ATHB12    <---------ANAC46 <-----------GT1  --------->ZAT18 < ------------------->TaNAC69(2)--------->AHL20(2) <---------ANAC55(2)    --------->AHL20(2)------>ZmHOX2a(1) ===================bZIP_DOF--------->WOX13(1) <---------REM1(2)   --------->YAB1   <---------ZAT18<-   tcaaaacatgacacgtgtctgtttatttgtcaatgaaatgaaatcactcttcacgtatactgaataaaataacaattttatgtaagtcccctcctaatta  3738500   <---------YAB1 <---------AHL20(2) <---------------AGL15 --------------->AGL15 ---------YAB1 ------YAB1                            <---------HSFB2a(2)                               --------->ARR11(3) --->AHL20(2)                          <---------HSFC1(1)                                <---------AHL20(1) --->ATHB51                            --------->HSFC1(1)                                --------->AHL20(1) ----ICU4                              --------->HSFB2a(2)                               <---------ARR11(3) ----AHL20(2)                      --------->GLK1(1)                           <<<<<<<<<MYB98 -->ICU4                          <---------ARR11(3)                         ----------->GT1 -ICU4                            --------->ARR11(3)                        --------->AHL20(1) -----------------AGL2           --------->HSFB2a(1)                      <---------ARR14(2) --------AHL20(2)     --------->AHL20(2)        <----------DOF2           --------->ARR14(2)        <   tttttatttttggtaatcgaaaaattcaatatcgaagatttctagaccatctttttttgaacaagagactagagcaaatatgttaaatctatatattgtt  3738600          --------->RAP2.6(2)        --------->ZAT2                                                                  <----------DOF2        <---------ZAT2                                                                ---------->ID1        --------->At4g35610                        --------->HSFB2a(2)               <-----------GT1        <---------At4g35610                     ------>ZmHOX2a(1)              <----------DOF2    --- -----------GT1      <----------DOF2          ------>ZmHOX2a(2)                <---------DAG2   <----   ttttactctcagcagcaactcggctttagaacatggtctgaattttgatccttccaaaatatgtccatggtcgattacaaacttttttttctttttgtta  3738700                                      <---------YAB1                                --------->CCA1(2)                                    --------->AHL20(2)                             --------->ARR11(3)                             --------->KAN4(2)                                     <---------AHL20(1)                            <---------HSFC1(2)                                     --------->AHL20(1)                            --------->HSFB2a(1)                                   --------->AHL20(2)                            --------->KAN4(1)                                 --------->MYB46(3)                            --------->HSFC1(2)                             <---------WRKY12                            <---------KAN4(1)                              <---------WRKY38(1)                            <---------HSFB2a(1)                           --------->WRKY18(1)                       --------->YAB1<---------AHL20(1)                <---------TOE2(3)                     --------->MYB52(1)                             <---------AHL20(2)          <----                  <---------At4g35610<---------AHL20(2)          ====================================       <---------At4g35610 <---------KAN4(2) --------->AtLEC2    --------------->AGL15          ----- ------>ZAT6      --------->At4g35610--------->AHL20(1)          <---------------AGL15      <------ZmHOX2a(1) -------GT1   <-----------HVH21     --------->YAB1      <----------DOF2<---------TOE1(3) <------ZmHOX2a(1)   actctattcaactcatggtcagcaaacagaacattctattatatttcatggaaaatttcttttgtttcattttaaggtcaacaaatatataggaggaatg  3738800  Previous    Next  AGI:  At3g11840.1    Description:  U-box domain-containing protein. similar to U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G35930.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO50156.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain U box; (InterPro:IPR003613) Range:  from: 3736406    to: 3738263    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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