Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                      --------->RAP2.6(3)                   --------->MYB52(1)                   <---------DOF5.7(2)                 --------->DOF5.7(2)                <----------DOF2               ------>ZmHOX2a(2)              <------ZmHOX2a(2)              <---------RVE1(1)             <---------ARR11(3)             --------->ARR11(3)                                                       <------ZmHOX2a(2)             <---------ARR14(3)                                                      <---------ARR14(2)             --------->ARR14(3)                                                      --------->ARR14(2)             --------->ARR14(2)                                                  <---------At4g35610            <---------GLK1(1)                                                 --------->WRKY38(1)           ----------->ARR10                                                 <---------MYB52(1)         --------->LBD16                                                    <-------GAMYB       <---------LBD16   <----------DOF2                                   <---------ANAC46        <- --->ORA47(1)<---------ARR14(2)                         ----------->HVH21  <---------ANAC58     <---- -->DEAR3(1)--------->GLK1(1)                      <---------ZAT2          <---------ANAC58    <-----   ccattttagaccggagatctttaacggctttagcattgtgaagcgtcttgctctgctcgtgacatgaagagagtgtttcgttgagccgatctagctcctt  3730700                                                                                                    <                                                                                                    -                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                              -------                                                                                              -------                                                                                              -------                                                                                              -------                                                                                              <------NtERF2                                                                                             <-------                                                                                             --------                                                                                             ------>NtERF2                                                                                            ---------                                                                                            <--------                                                              <---------LBD16              --------->ATERF1(1)                                                             ------>ZmHOX2a(2)             <------NtERF2                                                         <---------MYB46(3)  ----------->RAV1(2)<----                                                       <---------MYB52(1)    --------->At4g35610-----                                                   --------->MYB52(1)        <---------At4g35610-----                                                  --------->AtMYB61     --------->ANAC58  <---------ATERF1(1)                                                  <---------ALFIN1      --------->ANAC58  ------>NtERF2                                               --------->ANAC58      <---------GLK1(2)   <---------ETT(2)                                               --------->ANAC58 <---------LBD16          --------->DEAR3(1)      <----------DOF2          <---------ARR11(3) --------->DEAR3(1) <---------ARR14(2)<-----------HVH21 --------At4g35610   --------->ARR11(3)        --------->ANAC46 --------->LBD16   --------->GLK1(1)-- -----MYB52(1)       <---------ARR11(3)     <-------TEIL<--------P--------->LBD16 <---------GLK1(1)-- -----DOF2      <-------TEIL   --------->ARR11(3)--------->MYB46(3)  --------->ARR14(2)<---------ATERF1(1)   tagctcttctttcacagattcaacatcttcgaagaacttgtcgaggttcacaccaccggttgatcccgcgggattcgccatctgaactccgtcgccaccg  3730800    --------->O2    <---------O2  <---------DOF5.7(2) ------NtERF2 -------->ATERF1(1) ------->ANAC58 ------->ANAC58 --------ATERF1(1) ------>RAP2.3(3) ------>ATERF1(2) ------>DEAR3(1) ------>RAP2.3(2) -------ATERF1(2) ------>DREB2C(2) ------>RRTF1(2) ------>RAP2.6(2) ----->ERF1 ----->ATERF1(1) ----->RAP2.3(1) ------LBD16 --->DREB2C(2)                    --------->LBD16 --->DEAR3(1)                   --------->At4g35610 ->GAMYB                        ------>NtERF2 ----ALFIN1                     <---------LBD16 -->ATERF1(1)                --------->At4g35610 -->DEAR4(2)                 <---------At4g35610 -->DEAR3(2)         --------->HSFB2a(1) -->MYB46(3)         <---------HSFB2a(1) --ATERF1(1)         <---------MYB46(3) ->ABI4(1)           <------MYB46(1) >DEAR3(1)           <------MYB83<---------ANAC46 -ALFIN1   <------NtERF2    --------->ANAC46      <---------ZAT2 -----ATERF1(1)      --------->HSFC1(2)           <---------At4g35610 ->NtERF2<---------DEAR3(1)<---------LBD16        --------->ZAT2                       ----------->GT1 ---->ABI4(1)        <---------HSFC1(2)           --------->At4g35610   <---------AHL20(2) ------->LBD16      <---------AtMYB61         <---------KAN4(2)         --------->AHL20(2)  --------- ---->NtERF2  --------->ALFIN1  <---------At4g35610            <---------ATHB12----------->GT1   ccggcaacgtctcggcgaggggatggttctccgctgcggaagcgagagaatgagctggaaaacaaatcgttcatttaaaattcgaaaaatagagaaatct  3730900                      ------->TEIL                                                 <-------GAMYB              ------>ZmHOX2a(2)                                                   ----------->GT1             <------ZmHOX2a(2)                                          <-------TEIL            --------->ARR14(2)                                  <---------SPL7   <---------DEAR3(1)      --------->GLK1(1)     ------->GAMYB                     <---------------AtSPL3         --------      <---------GLK1(1)  --------->MYB52(1)  ----------->GT1  --------------->AtSPL3  <---------AHL20(2) >GLK1(1)   <---------ARR14(2)        ---------->DOF2         <---------------AtSPL8 <----------DOF2   agagagagatttcagatcggaatgaatcaacgggaagacttaaagaatggaaaaatgagaagaagtcgtacagattcaagtaggcggttttattgaaaag  3731000                                                                      --------->At4g35610                                                                   --------->HSFB2a(1)                                                                   <---------HSFC1(2)                                                                   <---------HSFB2a(1)                                                                   --------->HSFC1(2)                                                                   <---------At4g35610                                                            <---------ANAC46                                                          <---------WRKY18(1)                                                       <---------ANAC58                   --------->LBD16                                                       <---------ANAC58                  <---------ANAC46               <---------TOE2(3)        --------->ANAC58 --------->WRKY12               <---------LBD16 ---------->DOF2                        --------->ANAC58<---------WOX13(1)    ----------->GT1 -->DOF2<------ZmHOX2a(1) <------ZmHOX2a(1)           <---------MYB46(3)    ---------->DOF2<------NtERF2   tccaaaaggaggattatgaggtaagagaggaagaagtcaaacaagtaagtctctattggttgacttggaagcttctgagaaagtaacaatggcggagaag  3731100                                        <---------ANAC46         ------>ZmHOX2a(2)                                        <---------ANAC58        <------ZmHOX2a(2)                                        <---------ANAC58       <---------ARR11(3)                                       <-------TEIL            --------->ARR14(2)                                       --------->SPL7          --------->ARR11(3)                                   --------------->AtSPL3      <---------ARR14(2)                                <-----------HVH21       --------->At5g28300                       --------->ALFIN1------->TEIL   --------->ANAC46            <------------CBF           ---------->DOF2--------->ZAT18          <---------ARR14(2)          --------->AHL20(2) <------MYB46(1)      *TSS<---------ZAT18         <----------TaMYB80           <---------AHL20(2) ----------->GT1  <---------ARR14(2) <---------SPL7--------->ARR14(2)    --------->YAB1    ---------- <------MYB83     --------->ARR14(2)<---------ANAC55(2)----------->GT1 <---------ARR11(3)---------->DOF2   ggaaggtgaagttgaaagcgaaaccgtgtgcccttgtcccgtacgtgtaagtatatacggtaacagatcccaaaatcatatataaattggagaaagaaaa  3731200                                          <----------DOF2                                        <------NtERF2                                      <---------DEAR3(1)                                      --------->ETT(1)                                      <---------RAP2.6(2)                                     --------->RAP2.6(3)                             --------->AHL20(1)                             <---------AHL20(1)                             --------->AHL20(2)                                        --------->ANAC58                             <---------AHL20(2)                                        --------->ANAC46    --------->YAB1          --------->AHL20(2)               <---------YAB1 --------->TOE2(3)   <-------TEIL --------->ATHB12     ---------->ID1<----------DOF2     <------ZmHOX2a(1)            - ->GT1        <---------WOX13(1)   <-----------RAV1(1) <---------TOE2(3)  <-------TEIL --------->ANAC58   aaacattcgtaatttgaatgatttttaaaattttattttgtcggctttggatactttaagtttatcatccaaaggatacattagcccatacgaaacactt  3731300                                                                   <---------------AGL15                                                                   --------------->AGL15                                                                  --------->ANAC55(2)                                                                <-----------GT1                                                            --------->AHL20(2)                                                            <---------AHL20(2)                    ---                                <----------ID1             --------->AHL20(1)                    ----               --------->At4g35610                         <---------AHL20(1)                    <---   --------->AHL20(2)      <---------AHL20(2)              --------->AHL20(2)                ------>MYB46(1)   <---------AHL20(2)      --------->AHL20(2)             --------->AHL20(2)<---------GLK1(2)------>MYB83 -------->YAB1 <---------At4g35610          <-----------GT1<---------AHL20(2)              <---------MYB59   attgataaattgacttcagcagaaaacatttaaaaaaacaaaaatgttactgtatatcaaattaatttacataatttagaatcgtccatcgaaccaaatt  3731400                     <----------DOF2                    <---------ANAC58                    <---------ANAC58                                               ----------->GT1             --------->ARR14(2)                                                    --------->YAB1            ------>MYB46(1)                                                      <------------CBF            ------>MYB83      --------->DOF5.7(2)                            --------->ANAC58          <---------MYB111(1) <---------MYB52(1)                             --------->ANAC58          --------->AtMYB61  <-------GAMYB                                 ---------->DOF2      --------->ZAT18<---------DAG2      --------->ANAC58              <---------LBD16 ------->DOF2<---------ARR14(2)          --------->ANAC58             --------->MYB52(1) ----->AHL20(2) <---------ANAC58    <----------ID1             <----------DOF2------------>CBF   <--- ------AHL20(2) <---------ANAC58---------->DOF2          <---------ZAT18 --------->LBD16       <-----   taaagaagcccaccaaatccttgcttttctccgttaaagggccaagcctaaacccatagcccagtctttgagcaccggaaagcaattgtaatacttcgat  3731500                             ------->GAMYB                            <---------MYB111(1)                            <---------MYB111(2)                            <---------MYB55(2)                            --------->MYB46(3)                         ------>ZmHOX2a(1)                     <---------ARR11(3)                                                --------->AHL20(2)             --------->CCA1(2)                                                         <---------AHL20(2)            --------->ARR11(3)                           --------->ANAC58      -------->P ------MYB46(3)  --------->ANAC46                ---------->DOF2   ------------>CBF  ----------->TBP< -------CBF <---------ARR11(3)-------->P     <-------TEIL--------->ANAC58    --------->MYB46(3)  <---   tgttcgatttgtaagatatacaacatcctaacaaccatacaccgatatacataaagaacaagtcaaatgttcaatatgaacaaccatataaaaatagaat  3731600  Previous    Next  AGI:  At3g11820.1    Description:  SYP121 (syntaxin 121); SNAP receptor. Identical to Syntaxin-121 (SYP121) [Arabidopsis Thaliana] (GB:Q9ZSD4); similar to SYP122 (syntaxin 122), SNAP receptor [Arabidopsis thaliana] (TAIR:AT3G52400.1); similar to syntaxin-related protein Nt-syr1 [Nicotiana tabacum] (GB:AAD11808.1); contains InterPro domain Target SNARE coiled-coil region (InterPro:IPR000727); contains InterPro domain Syntaxin, N-terminal; (InterPro:IPR006011); contains InterPro domain Syntaxin/epimorphin, conserved site; (InterPro:IPR006012); contains InterPro domain t-SNARE; (InterPro:IPR010989) Range:  from: 3729311    to: 3731122    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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