Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      <---------ANAC58                            <-------TEIL                           --------->CCA1(2)                           --------->GLK1(2)                            --------->LBD16                          <---------ARR14(2)                           --------->RAP2.3(2)                      --------->LBD16                                  --------->RAP2.6(2)      --------->ARR14(2)  --------->ARR11(1)                        --------->ANAC46           ======      <---------GLK1(2)   --------->ARR14(2)                        --------->ANAC58           <-----      <---------ARR14(2) <---------GLK1(1)                          --------->ANAC58    --------->TOE1(2) ------->DOF2        --------->HSFB2a(2)                          ---------->DOF2  --------->ANAC58 >HSFC1(1)           <---------HSFB2a(2)                         <------ZmHOX2a(2) --------->ANAC58 >HSFB2a(2)         <---------LBD16 <---------ANAC58       --------->TOE1(2)<---------ARR14(2) ====== -HSFC1(1)       --------->ZAT14    <---------ANAC46     <---------KAN4(2)  --------->ARR14(2)<------ -HSFB2a(2)      <---------ZAT14   <-------TEIL  ---------->DOF2 ====================================   gaaagacggatgctcgaagtgttctggagattcgaaattcgtgtgcctcaacaaagaagaatgtgcgatcaagccgcaaaactgcaagaaccaaggagga  3727400                                  <---------LBD16                                  <---------ANAC58                                  <---------ANAC58                               <---------ARR14(2)      --------->ANAC46                               --------->ARR14(2)    --------->REM1(1)                             <----------DOF2         <---------ALFIN1                    ------>ZmHOX2a(2)                --------->ANAC46                   <------ZmHOX2a(2)                --------->ZAT14           <---------ANAC46 <---------ANAC58  --------->ANAC58           <---------ANAC58 <---------ANAC46  --------->ANAC58                                   ----    <XXXXXXXXXXXXXXXXXXXXMIR2111B*<---------ANAC46  <---------ZAT14                  --------->ARR14(2) ==========================HOX2a_HOX2a     <---------ARR14(2)                        --------->GLK1(2) -ZmHOX2a(1)      <---------ARR14(2)       --------->ARR14(2)      <---------ANAC58  <---------ARR14(2) =========================HOX2a_HOX2a   --------->ANAC58  -------------->OsCBT      <---------CCA1(2) ----ID1   <---------ANAC58 <---------ANAC58---------->DOF2        <---------ANAC58 <---------GLK1(1) =HOX2a_HOX2a     --------->ARR14(2)    --------->ANAC58--------->DEAR3(1)  <---------TOE2(3)--------   caagtagattgtagcttggggatccaattggcgttttcgggcacggataagcactacaccgcgttgaattcgtggtatgaggttgcaaatctgaagcagt  3727500                                          ------>MYB83                                          ------>MYB46(1)                                          -------->P                                        --------->AtMYB61                              <-------GAMYB                                       <---------MYB52(2)                             --------->ALFIN1                                       --------->MYB46(3)                <----------DOF2                                       <---------MYB55(2)            <----------DOF2  <-----------RAV1(1)                             <------ZmHOX2a(1)                 <---------At4g35610  <---------ANAC58   <----------DOF2       ---------->DOF2------->GAMYB          --------->At4g35610  <---------ANAC58 ----->ZAT14           >>>>>>>>>RAP2.2-------->P        --------->ARR11(3)          <---------ANAC46 ------->AtSPL3 --------->ANAC46   <---------MYB52(2)   <---------ARR11(3)      <----------DOF2   actcgctctatggcctctactccaatctaaaggactcactaaccaacccattcaagaacatcttctgatgactttctttctcctttgtgtgttgctactc  3727600                                                                               <---------ANAC58                                                            --------------->AGL15                                                            <---------------AGL15                                                         <-----------GT1       <---------ANAC46                                                     <---------YAB1            <---------ANAC58                          <----------DOF2         <---------YAB1         <---------AHL20(1)                     ----------->RAV1(2)       --------->LBD16 <---------ARR11(3)         <----------                     <---------At4g35610      <---------ANAC58 --------->AHL20(1)    <---------ANAC58                   <-----------GT1            <---------ANAC58 --------->ARR11(3)    <---------ANAC46               <---------AHL20(2)             <---------ANAC46 <---------AHL20(1)    <---------ANAC58             <---------YAB1                   <---------ANAC55(1)        --------->AHL20(1)       <--            <---------AHL20(1)                <---------ANAC55(2)        --------->AHL20(2)  <-------            <---------AHL20(2)<----------DOF2 --------->ANAC55(2)        <---------AHL20(2)  <-------   ttgtaattttgtattattttttcacctgctttctttgtattatttcttccgtatgatttttgctatatattgtattttattacttgggcgtttaactttt  3727700                 <---------ARR14(2)                               <----------DOF2      <---------AHL20(2)                                  <---------HSFB2a(1)     --------->AHL20(2)                             ---------->DOF2 -GT1<---------AHL20(2)                          --------->HSFB2a(2) -------AtLEC2   --------->ARR14(2) <---------ARR14(2)    --------->HSFB2a(1) ---DOF2         --------->ZAT14    --------->ARR14(2)----------->GT1  --------->ANAC46            << --DAG2      --------->YAB1 --------->CCA1(2)    <---------HSFB2a(2)  <---------TOE2(3)    --------->AHL20(2)   tcatgaattaaatagtcagaatactctcagatatatcatatactccctgttctaaaaagaaaattcttctttgacgaaacaaaaaaaaaaaaaaaaaatt  3727800                                                                 <---------LBD16                                                             ------->TEIL            --------->YAB1                          ------>NtERF2                     <---------GLK1(2)  --------->YAB1  *TSS                    <---------ATERF1(1)        ------>ZmHOX2a(1)    --------->TOE2(3)    ------ <<<<<<<TBF1<-----------GT1--------->ATERF1(1)    ------>ZmHOX2a(1)     --------->GLK1(2)     <------   cttcttctactaacttacgcttcaatggcgactccaactccatctctatctcctcctccattgaatctctggataatcttatcagaatcaaaacgaatca  3727900            <-----------TGA1            <-----------HVH21           --------->bZIP60(2)           --------->bZIP60(1)           <---------bZIP60(1)           --------->TGA1a           <---------TGA1a           --------->O2           <---------O2           --------->ANAC58           --------->ANAC58           --------->ANAC55(1)           --------->ANAC55(2)           --------->ANAC46     <---------ALFIN1  ------->GAMYB  ===================MYC_MYB  <---------ZAT18      --------->ZAT2        ------>ZmHOX2a(1)                 <---------ANAC58 --------->ANAC58    ------>ZmHOX2a(1)      <---------ALFIN1            <-----------GT1 --------->ANAC58   --------------------->WRI1                         <-----------GT1 --->YAB1  <---------ANAC55(2)            ------>ZmHOX2a(1)           --------->ZAT14               < ---ATHB12<-----------STF1       <---------MYB52(1)   <---------At4g35610      <---------ANAC58     <   tcaacgcacactcacgtcacttcctagctctctccgttctcttcctcctccctctctgcttctccatcacagtttacccttccgtcttccttctcatcac  3728000                                            ------>NtERF2                                            <------NtERF2                                            <---------ATERF1(1)                                           <---------ZAT18                                           <---------SPL7                                         --------->At4g35610                                         ------>NtERF2                                         <------NtERF2                                         --------->ATERF1(1)                                         <---------At4g35610                                        ------>NtERF2                                        <---------ATERF1(1)                                       <---------DEAR3(1)                                       --------->ANAC46                                      --------->At4g35610                                      <---------At4g35610                                      ------>NtERF2     --------->YAB1                   <---------LBD16           <---------ICU4                <------    <---------ATHB12                <---------LBD16--------->ANAC46                           <------  --------->WOX13(1)    --------->DEAR3(1)<---------ANAC46      --------->YAB1                <------ ------ZmHOX2a(2)    <---------ALFIN1 --------->LBD16          --------->ICU4          ------->GAMYB- ---------ATHB12  --------->ANAC46 ------>ZmHOX2a(1)         --------->YAB1         --------->MYB52(1)   cgatcaatcatccgcttctcacaacaccgtctctctcctccgcggcggactccacaacaacaacgatgatgacatcgataccaaaacaacggtcttactt  3728100         --------------------->WRI1    <-----------HVH21                                                                 <---------AGP1   ----------->GT1                                            <---------ANAC46      --------->ETT(2) ---ANAC46           <---------At5g28300                <----------DOF2         <---------TOE2(3) ---ANAC58          <-----------GT1                    <---------ANAC46   <---------GLK1(2) ---ANAC58  --------------------->WRI1            --------->WOX13(1)      <---------ARR14(2) ----------->MYB.PH3(1)--------->DEAR3(1)       <------ZmHOX2a(2)      <---------TOE2(3) ----------->GT1   gtaatcggttacatcgttgttatcaccgtcttcaatctcttagctattggatcaatcgcttatagtgtgtttcaaggattctatggtagacctgtgaaat  3728200                                                               <---------ARR11(1)                                                               <---------ARR14(2)                                                               --------->ARR14(2)                                                               ------->TEIL                                                               --------->GLK1(2)                  <---------ZAT2                              <---------CCA1(2)                  --------->ZAT2                   --------->WRKY12             <<<<<<<<<<GATA-1                      --------->WRKY38(1)                        -------       ----------->GT1                     --------->ANAC46   <---------ARR14(1)              <------     --------->ZAT14              <-----------GT1<----------DOF2  <---------YAB1             <-------     <---------ZAT14             <-----------GT1 --------------------->WRI1            <---------YAB1   tgaactctgcagtgaaatcgagcttcgcttcgtttttacctcttctcgctactttgacctcatcgaatcttatagttttagggggttttctgattccagg  3728300  Previous    Next  AGI:  At3g11800.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G44150.1); similar to expp1 protein precursor [Solanum tuberosum] (GB:CAJ77501.1); contains domain PTHR21454 (PTHR21454); contains domain PTHR21454:SF1 (PTHR21454:SF1) Range:  from: 3726114    to: 3727735    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g11810.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G03330.1); similar to hypothetical protein OsI_036713 [Oryza sativa (indica cultivar-group)] (GB:EAY82754.1) Range:  from: 3727802    to: 3729037    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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