Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   --------->ATHB12       <---------ARR14(2)                                        <---------ICU4       --------->ARR14(2)                                        --------->YAB1       <---------GLK1(2)                                        <---------YAB1   <---------LBD16                                           <-------TEIL --------->GLK1(2)                                         --------->TCP20 <---------ARR14(2)                                       <---------DEAR3(2)                 -------- --------->ARR14(2)                                   <---------ANAC58                       <------- -------->ARR14(2)                  <---------ARR11(3)<---------ANAC46                       <------- ---------ARR14(2)                  --------->ARR11(3)<---------ANAC58                       <------- ------>LBD16                    <---------WOX13(1)   <---------O2                           <------- -----LBD16                     <------------CBF     <---------TOE2(3)<---------ANAC55(2) --------->GLK1(1) ->GLK1(1)                   --------->ETT(1)       <---------DOF5.7(2)              <-------TEIL  -- -->DOF2                     <---------ANAC46  <-------TEIL<---------PCF2      --------->MYB52(1)  <- --GLK1(1)           --------->ANAC58         <---------MYB52(1)--------->ICU4 <-----------GT1    --- >ARR14(2)           --------->ANAC58 ------>ZmHOX2a(2) --------->ALFIN1 --------->AHL20(2)  --------   cggaatcgggattctcaaatcgcaagaaatgtcggattgatcttatccgttcattaacgtgggtccatgattacttaaaataaacggttcagatttcgta  3725700                                                    <------MYB46(1)                                                    <---------ANAC58                                                    <---------ANAC46                                                    <---------ANAC58                                                    <------MYB83                                                   --------->MYB46(2)                                                   --------->MYB111(1)                           <---                                                   --------->MYB111(2)                           ----                <-------GAMYB                      --------->MYB52(2)                            ----      <---------MYB52(1)                           --------->MYB59                              ----- ->ANAC55(2)   <---------MYB46(3)                  --------->MYB55(2)                     <---------TGA1a --ANAC58      ----------->GT1                     <---------AtMYB61                      --------->TGA1a --ANAC55(2)  --------->ALFIN1                    <---------MYB55(1)                      --------->O2 --ANAC46     <---------AtMYB61                  <---------MYB52(1)                       <---------O2 --ANAC58   --------->ALFIN1           <---------ZAT14                                   ------>MYB46(1) ------->AHL20(2)                      --------->ZAT14             <---------TOE1(3)     ------>MYB83 --------AHL20(2)                      <---------ZAT18--------->ALFIN1                  <---------ALFIN1 ------>ICU4<---------ANAC46 <------ZmHOX2a(1)  <-----------HVH21  <---------TOE2(3)   --------->MYB46(3) --->GT1<---------At5g28300<---------TOE2(2)--------->MYB52(1)    <-----------GT1   <-----------GT1   attaatctgttacggtgtggttaatgacataggattagcagtgaacaaactgttaggtgggatttgtttaacgatttcaattcaagttacccacttggca  3725800       <---------ICU4       --------->YAB1       --------->ATHB51          --------->ANAC46       -------->HAHB4            --------->ANAC58       <--------ATHB1           ---------->ID1      <---------YAB1          ----------->HVH21      <---------ATHB51     <---------ARR14(2)            --------->ATHB51      --------->ICU4       --------->ARR14(2)--------->YAB1    --------->YAB1       ----------->ARR10  <---------YAB1  --------->AHL20(2) --------->At4g35610  --------->YAB1 --------->ATHB12 --------->YAB1      <---------ZAT2      <---------YAB1 <---------YAB1 ---NtERF2           --------->ZAT2     <---------AHL20(2) ----->ANAC58        <---------At4g35610--------->AHL20(2)                                   -------- ----->ANAC58       ------>NtERF2--------->ANAC58  <---------At4g35610           --------->AHL20(2) ->NtERF2       <-----------GT1<-----------GT1   --------->ANAC46               --------->AHL20(2)   ccaaaataataattgtatttgccagctcagatttgacgctatttttataatacagcacataattgaacattgtttttggaaaataaaaaacaaatcccta  3725900                                                                                        >>>>>>>>>RAP2.2      <-----------ARR10                                                               --------->ARR11(3)      ------->TEIL                                                       <---------TOE1(3)      --------->GLK1(2)         <---------ATHB12                   <---------ATHB51   <---------ARR11(3)      <---------ARR11(1)   --------->ANAC46                 ---------->DOF2          --------->CCA1(1)      --------->ARR14(2)   --------->ANAC58             --------->GLK1(2)<---------TOE2(3)      <---------ARR14(2)   --------->ANAC55(1)          --------->ARR11(3)         --------->YAB1     <---------ARR14(1)    --------->ANAC58             <---------ARR11(3)         --------->AHL20(2) ->TOE2(3)             ----------->RAV1(1)        <---------YAB1   --------->ICU4 <---------ATHB12   attcaacgaatctacttctcttatccaacacgaaatcaagagttttaaaaatatgaaaaatctaaagaaattattcaggtttcaataatatctaaattag  3726000                           ---------->DOF2                       --------->AHL20(2)                                                     <------                       <---------AHL20(2)                                                    <-------                   <---------YAB1                                                            --------                   --------->AHL20(2)                                                       ---------                   <---------AHL20(2)                                                  <---------WOX13(1)               --------->AHL20(2)                                       <---------AHL20(2)<---------TOE2(3)             --------->AHL20(2)                         <-----------HVH21---------->DOF2 --------->YAB1             <---------AHL20(2)                  <------NtERF2      --------->AHL20(2) <---------YAB1           <---------AHL20(2)     <---------ARR14(2)   <---------bZIP60(1)          <---------AHL20(2)   tgcctctaagtatatttttatataattaaaaaagcatattttgttttgggccgcatgaagtcaggcccaaatatttaaaggcttatttgattaatgatat  3726100                                                                                                    >                                                                                                    <                                                                                                   --                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                               <-----                                                                                              <------                                                                                              <------                                                                                              <------                                                                                              <------                                                                                             <-------                                                                                             --------                                                                                            ------>NtERF2                                                                                            <--------                                                                                          <---------RAP2.3(2)                                                                                          <---------DEAR3(1)                                                                              =======================                                                                 --------->GLK1(2)        <---------RAP2.6(2)                                                       <---------At4g35610    <-------GAMYB <------NtERF2 ---YAB1                                               --------->At4g35610   <-----------RAV1(1)----- --ARR11(3)                                       ----------->HVH21 <------------------------ANAC81-- ->ARR11(3)   *TSS                           <----------DOF2    <---------GLK1(2)        <---------LBD16 >YAB1     ------>ZmHOX2a(1)               <---------At4g35610----------->ARR10        <---------REM1(2)   ttgaagacatgtccttgaatcggagttttcgaaaattttgaagggagcttttctgacagatggctagattctttcttctctgttgcctcttcgcggcggt  3726200        <---------ICU4       --------->ICU4       <---------YAB1    --------->TGA2(2)   <-----------TGA1  --------->TGA1a  --------->O2  <---------O2  <---------TGA1a  <---------TGA2(1)  --------->TGA2(1)  --------->ANAC55(2)  <---------bZIP60(1)     <------NtERF2  --------->bZIP60(1)    ----------->RAV1(1) <-----------STF1        ------>NtERF2 ----------->STF1       --------->DEAR3(1) >>>>>>>>>>AtbZIP1      ----------->HVH21 ---------TGA2(2)      <------NtERF2 --------->TGA1        --------->RAP2.3(1) ------At4g35610       --------->ATERF1(1) ----->At4g35610      ------>NtERF2 ------->bZIP910(2)   <---------DEAR4(2) ------ZAT2           <---------ATERF1(1) ----->ABI4(2)       --------->ATERF1(2) ----->ZAT2          <---------ATERF1(2) -NtERF2--------->ATHB12<---------ETT(2)                                ------>ZmHOX2a(2) ---DEAR4(2)         <---------DEAR3(1)                                 <---------DEAR3(1) ---DEAR3(2)        --------->ATERF1(1)                                <------ZmHOX2a(2) ---MYB46(3)        <---------ORA47(1)                                --------->ARR14(2) ---ORA47(2)       --------->ATERF1(1)                              <---------ANAC58 --DEAR3(1)  <---------LBD16   <---------ICU4            --------->GLK1(2) ->ALFIN1  --------->WRKY12    --------->YAB1           --------->ARR14(2) -ABI4(1)  ----------->HVH21--------->YAB1              <---------GLK1(2)        --------->ARR14(2) ===========MYC_MYB<---------ATERF1(1)                  <---------ARR14(2) <---------DEAR3(1)     <-- ---->ALFIN1--------->MYB52(1)--------->ICU4--------->ANAC46        <---------ANAC58              <-- --------->HVH21--------->ATERF1(1)      <---------REM1(2)     <-----------RAV1(1)     <----------DOF2   gctgacgtcatcattgacggaggccggcgacaataatcaagtctactcgccttgttcagattctactgttgcgatcggcgatggattcactttcggcatt  3726300                                                    --------->ZAT14                      <---------GLK1(2)             <---------ARR11(3)                     <---------ZAT18                      --------->ARR14(2)             --------->ARR11(3)                     <---------ZAT14                      <---------ARR14(2)             <---------GLK1(2)                  --------------->AtSPL3                 ------->GAMYB      ------>NtERF2                            --------->ZAT14            <---------CCA1(2)   <---------At4g35610                        <---------MYB52(1)  <---------ICU4      --------->ANAC46   --------->At4g35610                   <---------ARR14(2)       --------->YAB1   <---------WRKY12 - -------ANAC58                           --------->ARR14(2)      <------ZmHOX2a(2) <---------WRKY38(1) -------ANAC58--------->GLK1(2)     <------ZmHOX2a(2)     --------------------->WRI1--------->MYB52(1)   gccttcgctgcgaaagattctttcttcagtacaaatcgatccaaatccgttcagtactctccctgcgatcatcgccatctctcgctcaacggaaactctg  3726400                                              <---------ICU4                    --------->MYB52(2)               <---------MYB59         ------>ZmHOX2a(1)                      <---------MYB52(1)       --------->REM1(2)      ================HOX2a_HOX2a               ------>NtERF2    <---------ANAC46          <------ZmHOX2a(2)                     --------->ARR14(2)   <------NtERF2 ---------->DOF2 <---------ALFIN1                   <---------ARR14(2)  <---------CCA1(2) <---------DEAR3(1)          <---------ARR11(3)               ------>ZmHOX2a(1)<-------TEIL -------->ATERF1(1)          --------->ARR11(3)           --------->ARR14(2) <---------MYB52(1)   ---   aggtcgccgtgttcagacctaaagtcgatgagatcacactccttaccatcaatacctctagttcctccagtttccgcccggttcgttctcatctctggtt  3726500                                                                  <------ZmHOX2a(1)                                                                <---------TOE1(3)                                                                <---------TOE2(3)                         <---------TOE1(2)             <---------ZAT18                    --------->At4g35610            <---------TOE1(3)                        <------MYB46(1)                    --------->YAB1            <---------TOE2(3)                        <------MYB83 =======================HOX2a_HOX2a ------>ARR11(3)  <---------YAB1                    --------->MYB59               ------>ZmHOX2a(2)<-   tatcttggtgaattagggtttcgattgcaggtttttgatcagattagaatggattaggtcactcttaaggaaatttagtatagatcggaatcatatgccc  3726600  Previous    Next  AGI:  At3g11800.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G44150.1); similar to expp1 protein precursor [Solanum tuberosum] (GB:CAJ77501.1); contains domain PTHR21454 (PTHR21454); contains domain PTHR21454:SF1 (PTHR21454:SF1) Range:  from: 3726114    to: 3727735    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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