Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       <---------ZAT14                                                 --------->ARR11(3)     --------->ZAT14                                                 <---------GLK1(2) ---------YAB1                                                       <---------ARR11(3) -------ICU4                                                       ----------->ARR10 ------>YAB1                                                       --------->ICU4 ------ATHB12                                                    ---------->DOF2 ----->ICU4                                                    --------->At4g35610 --->YAB1           <---------YAB1      <XXXXXXXXXXXXXXXXXXXXMIR837-5P ---YAB1------>ZmHOX2a(2)              ------->TEIL      ---------->DOF2      <---------ARR11(3)  --- >YAB1 <---------At4g35610      <---------------------WRI1--------->DAG2<-----------GT1       -------   taatcagtgatctgtttttgttgtgaatgtgctcagcgatgaatcgaatgaaaaactgataaagcagcaaagattttcaatatgttttccaattcacaaa  3722300                                                              --------->ANAC58                                                              --------->ANAC46                          --------->At4g35610            --------->REM1(2)                          <---------At4g35610           --------->ALFIN1                  <---------ANAC46               --------->ANAC58                  <---------ANAC58               --------->ANAC58   --------->AHL20(2) --------->ALFIN1           --------->ANAC46                              <----- ------>ARR11(3)  <---------ANAC58       ----------------->AGL1                           --------->HSFB2a(2) --->DOF2       <---------YAB1         <---------WRKY18(1)    --------->ANAC58            <---------HSFB2a(2)   gacattgaaatatcgattttgagtgtgtagcagcaatagaatgaccgattcaagaaatgtgtagacgcattcagagctaattgggttttttgccagaaca  3722400                                                      <---------YAB1                                                     --------->AHL20(2)             --------->ZAT18                                               <-------TEIL--------->DAG2        --------->HSFB2a(1)      --------->ZAT6                         --------->TOE1(2)--------->ALFIN1   <---------HSFB2a(1)    <-----------GT1                        <---------------AtSPL8              ---------->DOF2     <- -----ID1   <---------ATHB12             ---------->DOF2  ---------->DOF2     <------ZmHOX2a(1) <----   acaaatttactctaatcagcgtttgggttctatgaacacaatacaaaggtacgatttttataaagtgtggattagacagaggaaagtccccaaataagtt  3722500                                                 --------->TOE1(2)                                                --------->YAB1                                 ------                                            <---------AHL20(2)          ---------->DOF2     ---------                                      --------->AHL20(2)         --------->WOX13(1)         ---------                                   --------->ARR11(3)     <---------ARR11(3)                --------- --------At4g35610   --------->ATHB12 <---------AHL20(2)  --------->GLK1(2)            <------ZmHOX2a(1) ---TEIL      <----------DOF2      <---------ARR11(3)     --------->ARR11(3)     ---------->DOF2   catcggatggaacatgcttttgttgatttggattgaagatttatatataaacatgagaaaaatctttcaatccaaaaagacagaaaagaggaacacgaac  3722600                                                                                             <-------                                                                                             --------    <---------GLK1(1)          <---------DOF5.7(2)                                           --------   --------->ARR11(3)  --------->ARR11(3)                                --------->ETT(1)    -------- ->TEIL      --------->HSFB2a(2)                                   <---------MYB46(3)   --------->DAG2 >ANAC46     <---------HSFB2a(2)                                   --------->MYB52(2)   <------------ >ANAC58<---------ANAC58       --------->MYB52(1)           <---------LBD16    >>>>>>>>>TBF1--------- >ANAC58<---------ANAC58 ------>ZmHOX2a(2)       ---------->DOF2*TSS<-------GAMYB      ---------->DOF2   cttgagatttcggtgcgagaaggctgatctagtaaacggagtcggaagagagaaagactgtttctgggtttgttgtcggaagaagaaggaaaagtacgca  3722700                                                           --------->TOE1(2)                                                           ------->PIF5                                                           ------->MYC4                                            --------->TOE2(2)                                  <-------MYC3             <-------MYC4                                  -------->ABF1            <-------MYC3                                  ------->MYC4             ------->PIF4                                  ------->MYC2             <-------PIF4            <---------ANAC46                                  <-------MYC2             ------->MYC3            <---------ANAC55(2)                                  <-------MYC4             <-------MYC2     <---------ANAC58                                 <---------O2  <---------ANAC46             <---------ANAC58                                 --------->O2 ------>MYB46(1)         ------>NtERF2<---------ANAC58                                 <--------ABF1--------->MYB52(1)     --------->ETT(2)  <---------------AtSPL3         <---------ANAC55(2)       ------->MYC2     <---------ANAC46  <---------------AtSPL8         --------->TGA1a           <-------PIF5<------NtERF2--------->LBD16 ==========================================bZIP_DOF      <---------TOE1(2)  <---------ANAC55(2) ---------->DOF2                 =================bZIP_DOF--------->TGA1a   <---------ANAC55(1) --ANAC55(2)                     --------->ANAC55(2)     ------------>OsbHLH66     <---------ANAC58 ->ANAC46                   ----------->HVH21 <---------LBD16     <-----------RAV1(1) ->ANAC58         <------------CBF------->MYC3------>MYB83<---------TGA1a<---------SPL7 ->ANAC58       <---------------AGL15  =============================bZIP_DOF--------->ANAC55(2)    <- ---AtSPL3      --------------->AGL15  <----------DOF2  <------------OsbHLH66      --------->ANAC55(2) >ZAT18      ------>ZmHOX2a(1)   <---------TGA1a   --------->GLK1(1) <---------ETT(2)         <------ZmHOX2a(1)   agtgaaagtacggtcctgcccattgaaggaatgacacgtgtctttacctacgggtatcgcacgtgcgaatgtcgccatacgtgttccgtagtagaaggat  3722800                                       <--------P                                       <---------WOX13(1)                                  <----------DOF2                           <------------------------ANAC81                          <-----------GT1            <---------TOE2(3)--------->ANAC46                       <---------AHL20(2)           <-----------GT1   --------->ANAC58     ----------->GT1 <---------YAB1  <---------MYB46(3)               --------->ANAC58 --------HSFB2a(2)  <---------AHL20(1)<-------GAMYB <-----------------AGL1   tttagaagagtcaatagaacattatttttttcttcactttggttgattttggtttaacattttggaaaactcactcaactccttgagtattgttttcgaa  3722900                                                                   <---------YAB1                                                                 ----------->GT1                                                             <---------AHL20(1)              --------->YAB1                                 --------->AHL20(1)             <-------TEIL                                    --------->AHL20(2)        <---------CCA1(2)                                    <---------AHL20(2)    <---------ANAC58                                        --------->AHL20(2)    <---------ANAC58                                        <---------AHL20(2)    <---------ANAC46                                    --------->AHL20(2)                   <------- <-----------GT1                                        <---------AHL20(2)        <---------GLK1(2)--   aattttccttgtatattcatagcattttgtttcatataaaacaattagttatagtcatataaataaattgttattaagcacttggaatcttggattaagt  3723000                                                                    --------->REM1(1)                                                           <---------ZAT14                                                           --------->ZAT14                                                        <---------ANAC58         ------>MYB46(1)            <-----------GT1                             <---------ANAC58         ------>MYB83    --------->ZAT18                                     <---------ANAC46       --------->AtMYB61    <---------ZAT18              --------->ANAC46 <---------TOE1(2) --------->MYB46(3) ---------->DOF2              --------->ZAT14     --------->LBD16 ----------->RAV1(1) --------AtSPL8          <---------YAB1   <---------CCA1(2)--------->ZAT18 <---------ETT(2) -------->DOF2    <---------ARR11(3)     ------->TEIL  <-----------------------TaNAC69(2)   acaaagagcacatttcacaagaccattctcattacactctatgcatctcttccaggtttcgtgctctgcaacaactctcgacctcccattgcatttcgaa  3723100                                                                            <---------At4g35610                     <---------ALFIN1        <---------At4g35610   <---------HSFC1(2)                  <---------HSFB2a(2)  ------>NtERF2               --------->HSFB2a(1)                  --------->HSFB2a(2)------>NtERF2            --------->HSFB2a(2)             <---------ANAC58        --------->LBD16          --------->HSFC1(1)             <---------ANAC58       --------->RAP2.6(2)       <---------HSFC1(1)       --------->ARR11(3)     --------->ZAT6 --------->At4g35610   <---------HSFB2a(1)       <---------ARR11(3)     <---------ALFIN1  --------->At4g35610--------->HSFC1(2)       --------->GLK1(2)   ----------->HVH21 <---------ZAT2   <---------HSFB2a(2)         <---------MYB52(1)   catatcaaaaatctttcgttctcgcacatctcacactgccgcgacttagctgatgaaaacacttctagaagcttcttgagcttctcgttttcgttaagag  3723200  Previous    Next  AGI:  At3g11770.1    Description:  nucleic acid binding. similar to nucleic acid binding [Arabidopsis thaliana] (TAIR:AT5G06450.1); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337) Range:  from: 3721330    to: 3722664    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g11773.1    Description:  electron carrier/ protein disulfide oxidoreductase. similar to glutaredoxin family protein [Arabidopsis thaliana] (TAIR:AT5G06470.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39923.1); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin fold (InterPro:IPR012335); contains InterPro domain Glutaredoxin; (InterPro:IPR002109) Range:  from: 3722995    to: 3723447    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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