Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               <---------ZAT18             --------->ZAT14             <---------ZAT14           --------->ANAC46                                                                       ---  <---------AHL20(1)                                                                           ------  <---------ARR11(3)                                         ---------->DOF2           --------->ANAC58  --------->AHL20(1)                                        <---------AHL20(2)         --------->ANAC58 -->ZmHOX2a(2)<---------ALFIN1                              --------->AHL20(2)<---------ATHB12 ------ -DOF2   --------->ZAT6                          ---------->DOF2 ----------->GT1  --------->MYB46(3)   ccaatatatcaacactacactctgtgaaaacataaaaaaaaaacattgtagcaaaggcaaaattaaagagtatatagcaaatcaacaacaagaaaaacct  3708200                                                               --------->ARR11(3)                                                               <---------ARR11(3)                                                    <------ZmHOX2a(1)                                                   <---------At4g35610                                                   --------->At4g35610                                                 <---------LBD16                                                 <-----------RAV1(2)                                              --------->At4g35610                                              <---------At4g35610 ------>ATHB12                           --------->YAB1 --------->ANAC58                       ------ --->TOE2(3)                      <---------At4g35610   --------->ANAC58           --------->ZAT14 --->TOE1(3)       <---------TOE2(3)   <---------YAB1   <----------ID1             <---------ZAT14   tcattgagttgttttctgactagggttttaagagtttgctcattaatgagctcaggagacgacaaggtctcattaagtctctctctgtactcagaaacat  3708300                                                               ---------->DOF2                                    <----------DOF2          <---------ATHB12                           <---------At4g35610          ------>ZmHOX2a(1)                           --------->At4g35610         --------->TOE2(3)           --------->ATHB12 <---------CCA1(2)         --------->ZAT2         <---------AHL20(2)         --------->GLK1(2) --->ARR11(3) --------->ANAC46  <---------ALFIN1 --------->AHL20(2)   ---------->DOF2  --------->ZAT18   ctcgtttcttctccatactcaattgaatcagcagacacctttagaaaacaaattaatcctcaaatcaaagaccaaagagaatcaaagattgccctgaatt  3708400                                                     --------->DAG2                                                    --------->SPL7                                                    ---------->DOF2                                                 --------->ANAC58           <----------DOF2               <---------ICU4                    --------->ANAC58  ---------->DOF2               --------->YAB1                    <---------ANAC55(2)      <---------HSFC1(2)               --------->ATHB12                 <---------------AtSPL3    --------->HSFC1(2)             ------->TEIL                 --------->TOE1(3) <---------AHL20(2)       --------->ICU4                     --------->TOE2(3) --------->AHL20(2)             <---------   tgtggagtcaagatgaatcatggggaagaagtgagaagagaacaccttaaaacgtaaggcaatttataagaaaggaagcttttggttatagttttgccag  3708500                         ------>MYB46(1)                    <---------ARR14(2)                    --------->ARR14(2)                 <---------ANAC55(2)                 <---------ANAC58           --------->ALFIN1                 --------->ANAC55(2)       <-------MYC3                 <---------ANAC58          ------->MYC3             <---------At4g35610      <---------MYB52(2)             --------->ARR11(3)          --------->At4g35610        --------->ANAC58                <---------ARR14(2)             <          <---------At4g35610  <---------ANAC46  <---------ARR11(3)  --------->ARR14(2)          <---       <---------ZAT2  --------->TOE1(2)   ------->MYC2  <---------LBD16                     <-------       --------->ZAT2  --------->TOE2(2)   <-------MYC2 <-----------GT1                      --------       --------->At4g35610  ----------->HVH21    --------->ARR11(3)  <---------ARR11(3)  --------->HSFB2a(2)     <-----------RAV1(2) ------>MYB83--------->ANAC58  <-----------GT1   <----------DOF2<---------LBD16 --GT1 <---------At4g35610--------->ANAC46<---------ANAC46 --------->LBD16             <---------LBD16   acaaaacccagctgctgatgcgtaacctacgagacgggcaaggaacgtggagatgtttttcccgattagaagatactttccctcattttctcgggaatat  3708600                                               <------------CBF                                           --------->YAB1                                        --------->YAB1                                        <---------ICU4   <---------LBD16                     --------->ICU4 <---------ARR14(2)                    <---------YAB1 --------->ARR14(2)                  --------->YAB1 --------->ARR11(3)              <---------------AGL15                                             <- ---------CCA1(2)                --------------->AGL15                                          <---- ----TEIL            --------->DAG2 <---------ATHB12                               <----------DOF2 == --KAN4(2)--------->GLK1(2)     ------------>CBF                      --------->GLK1(2)<---------YAB1 -->TaMYB80    *TSS ---------->DOF2 <---------ATHB51   ----------->HVH21    <-----------HVH21   <----   acatatctggagaatgtgaagaaaaagtctcattaccaataataataagaattggatttgacaaagtttgagagtctgtgtcagactttattttagaggg  3708700            ------->GAMYB       <---------MYB52(1)      <-------GAMYB     <---------MYB46(3)     <---------DEAR3(2)     <------MYB83             <----------DOF2     <------MYB46(1)         ------>ZmHOX2a(2)     ----------->GT1        ==============HOX2a_HOX2a    <---------DEAR3(1)      <------ZmHOX2a(2)   <--------P   <-------GAMYB=============HOX2a_HOX2a  <-----------HVH21        <---------ARR11(3) --------->ZAT2<---------MYB46(3)  ------>ZmHOX2a(1) ----------RAV1(2)         --------->ARR11(3)  <-----------GT1 -----PCF2  <-----------RAV1(1)  <---------ANAC58  --------->WOX13(1)            --------->TOE2(3) =======================RAV--------->AGP1  <----------DOF2             ------->TEIL -----PCF5 <------------AtMYB77  <---------ANAC58<---------YAB1 --------->AHL20(2)   accaggtcggttaactgtcgttgtcatgagatctttcctgtctgtctttttatcattcaaacaaaaaaaaatgaatttataaaacttaaacacaaacaaa  3708800                  --------->AHL20(2)                  <---------AHL20(1)                  <---------AHL20(2)              <---------AHL20(2)             <---------AHL20(2)             --------->AHL20(2)                   <---------GLK1(2)            <---------WOX13(1)             <------ZmHOX2a(1)         <---------YAB1               --------->ALFIN1                                            ---      <----------DOF2             <------ZmHOX2a(1)        --------->HSFB2a(2)                -------  <------ZmHOX2a(2)             <---------TOE2(3) <---------ARR11(3)                         <------- <---------ARR11(3)       --------->AHL20(2)      --------->ARR11(3)                     XXXXXXXXXXXX --------->ARR11(3)       <---------AHL20(2)    ----------->ARR10                   ------->TEIL<----   taagatcacttttgatttattttattttttaaataaggatgtgcaggaatgagattttcttctaaaattgtgggagtaaatgaatgaatctaggtatgat  3708900                                           ------->TEIL      --------->YAB1          --------->HSFB2a(2) ------>ATHB12                --------->HSFC1(1)                                     --------->YAB1 -->ATHB12                    <---------HSFB2a(2)                                   <---------YAB1 --YAB1     --------->YAB1    <---------HSFC1(1)                       <---------ARR14(2)           < XXXXXXXX>MIR864-5P    <---------WOX13(1)<-------TEIL                  --------->ARR14(2)           < -----WOX13(1)       --------->ATHB12   --------->AtLEC2   <-----------GT1     ----------->GT1      <   tgatttcatcaaaatcagaaaactgattgtttctagaaaaacatgcatttggggtattttgaaaccacatgagtatatgatgagttattataaactagaa  3709000                                       <---------ANAC55(2)                                    <---------ARR14(2)                                    --------->ARR14(2)                                   --------->GLK1(1)                                   <---------GLK1(1)                               --------->HSFB2a(2)                        <-----------------AG                        <-----------------AGL3                      --------->ARR14(2)                      <---------ARR14(2)  --------->ARR14(2)                            <----------DOF2         --------->ANAC58   <----------DOF2                                          --------->ARR14(2)         --------->ANAC58<---------------AGL15     <---------ANAC58                  <---------ARR14(2)         --------->ANAC46--------------->AGL15<----------DOF2                        <---------ARR11(1) <-------GAMYB        <---------ARR11(3)  <---------ARR14(2)                        <---------ARR14(1) ---------ANAC58      --------->ARR11(3)--------->LBD16                             <---------CCA1(2) ---------ANAC46      <-----------ARR10<---------ANAC46              ----------------------->TaNAC69(2) ---------ANAC58<----------ID1 <---------HSFB2a(2) <---------ANAC58 --------->GLK1(2)------->TEIL   ttgcgttgtaaacgaaatagaacaaatcttcttttggaaatccgtatactttagcgtaagaaaatggaagaatttgatttggactcgtatctttgaagta  3709100  Previous    Next  AGI:  At3g11720.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G06440.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G06440.3); similar to unnamed protein product [Vitis vinifera] (GB:CAO39900.1); contains domain G3DSA:3.30.530.20 (G3DSA:3.30.530.20); contains domain SSF55961 (SSF55961) Range:  from: 3705871    to: 3708615    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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