Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  --------->ARR11(3)      <-----------GT1           <---------AHL20(2)       <----------DOF2               <---------ICU4           --------->AHL20(2)    <---------AHL20(2)           <---------AHL20(2)          --------->AHL20(2)  --------->AHL20(1)             <---------WOX13(1)                    <-       --------->AHL20(2)     --------->ARR11(3)          <---------YAB1                        <---- --------->ANAC46             <---------ARR11(3)        --------->YAB1                     <--------- --------->ANAC58             <---------AHL20(1)   <---------YAB1--------->ICU4         --------->GLK1(2) --------->AtLEC2         --------->LBD16       <---------YAB1--------->AHL20(2)       <---------ARR11(3) --------->ANAC58        <---------ANAC46    <---------YAB1--------->ATHB12            <---------GLK1(2)   tacaggcaaatatttaattatctagttccgaatattttcttttaactatgattcttatttatgattaattatgtccaaaatgtattcaagattcttttct  3698400                                                                                                    <                                                                                              <------                                                                                          <---------AHL20(2)                           <-----------GT1                                               --------->AHL20(2)                          ----------->HVH21                                   <---------ANAC58-------           <---------ARR14(2)                                                 <---------ANAC46-------  <-----------GT1       <---------REM1(1)                      <---------YAB1 <---------ANAC58<------ --------YAB1<---------LBD16                                <---------YAB1   <---------LBD16  <------ -----YAB1 --------->ARR14(2)<------------MYB.PH3(1)     <---------YAB1  <-----------RAV1(1)  ------- -DOF2  --------->YAB1 <---------TOE2(3)         ---------->DOF2--------->ATHB12<---------AtLEC2  <--   gattatactatagtattcggaaattgatgtaacagttttgtatttgagtatcaaagaatattatgaccattggaattgttgcgcatgactatttaatata  3698500         --------->ANAC46         --------->ANAC55(1)         <---------ANAC55(2)         --------->ANAC58         --------->ANAC55(2)         --------->ANAC58        <---------LBD16       --------->MYB52(1) --------->TOE2(3) <---------MYB59 ---------ANAC55(2) ---ARR11(3) -->AHL20(1)                                                  ----------->GT1 -->ARR11(3)                                           --------->At4g35610              <---------MYB46(3) ---AHL20(1)                                           ----------->RAV1(2)        <---------ANAC58 ---AHL20(2)                       <----------DOF2     <---------At4g35610        <---------ANAC58 -->AHL20(2)             --------->YAB1          --------->GLK1(1)              --------->ARR11(3) -- ---------GT1<------ZmHOX2a(2)  <-----------GT1  <---------GLK1(1)          --------->At4g35610    --   ttacctaaatcacggatcaaaaatcaatagttattcactttgcataagtagaattccatctgaagagtttaatataagagcagagcttgtttgttctgaa  3698600                                                                                 --------->AHL20(2)                                                                                --------->AHL20(2)  <                                                                            <---------YAB1         <-                     <---------AHL20(2)                                <---------ICU4            <---                  --------->AHL20(2)                                   --------->YAB1           <----                  <---------AHL20(2)                                   --------->ATHB12         -----                 --------->AHL20(2)                                    <--------ATHB1          ------             --------->AHL20(2)       ---------->DOF2    <---------ANAC46<---------YAB1        ------       <----------DOF2    ----------->GT1              <---------ZAT14--------->ICU4          -------     <---------ICU4  --------->AHL20(2) <----------ID1 --------->ZAT14<---------ATHB12       <------- --------->GT1  <---------YAB1       --------->AHL20(2)--------->At4g35610--------->YAB1  ---------->DOF2 ------->YAB1<---------AHL20(2) <---------YAB1     --------->MYB52(1) <---------YAB1---------->DOF2--   atagtaatactttcatttattaaaaaaatagtttatcaataaaagacaaaaacaaactgctgtgtttattcaatgattataaataaaaaagattaagccg  3698700                                                                                     --------->MYB46(3)                                                                                     <---------MYB111(2)                                                                                     <---------MYB55(2)                                                                                  <---------ALFIN1                                                                                  --------->AtMYB61    --------->At4g35610                                                          <---------MYB55(2)    <---------At4g35610                                                          --------->MYB46(3) ----------CDC5                                    <---------AHL20(2)           ------>NtERF2 --------At4g35610                                --------->AHL20(2)           <---------ALFIN1 ---NtERF2                     --------->DAG2  <---------ICU4                  --------->ANAC46 -----ATERF1(1)               ---------->DOF2 <---------ATHB51                --------->MYB46(3) ->NtERF2              --------->ANAC58       --------->ICU4                --------->PCF2 --->DEAR3(1)          --------->ANAC58       --------->AHL20(2)            <---------ZAT18 ----->HVH21     ---------->DOF2              <---------AHL20(2)       <---------ZAT14 ------>MYB83 -->DEAR3(2)<---------------AGL15            <---------AHL20(1)        --------->REM1(2) --At4g35610--------------->AGL15<-----------HVH21<---------AHL20(2)   --------->ZAT14 ------>MYB46(1) ------->At4g35610   ---------->DOF2        --------->YAB1          <---------ANAC46 <---------ALFIN1   acgctgagccgagacttaaaaaagaaagccaaaaaagtcagagctaaaataattaaatgttattcagacaccgtgtagtccccaccaccagcctgtccga  3698800                                     --------->DEAR3(1)                                    ------>MYB46(1)                                    ------>MYB83                                  <---------ALFIN1                                                  -                                  --------->AtMYB61                                                 -                                 --------->MYB46(3)                                                --                         ----------->RAV1(1)                                                    <----                      --------->ANAC58       *TSS                                              <-----                      --------->ANAC46 --------->LBD16                                   <----------DOF2             <---------YAB1    --------->ANAC46                                          <---------DAG2    <---------ALFIN1  --------->ANAC58--------->ANAC46  --------->ZAT6                <---------ALFIN1   aaacccaaacctgttttgatacacaaacaacacagaccacccccaaaactcacatctatctctatctctcttctctgtctctcactctccactttccgat  3698900 -------->At1g77200                     <----------DOF2 <-----------GT1                             < -------->DEAR3(1)             --------->ANAC58    ------>ZmHOX2a(1)                     <---------ZAT14 ------->DEAR3(2)              --------->ANAC58   --------->TOE2(3)                      <---------ZAT18 --ZmHOX2a(2)                ---------->DOF2 <-----------GT1          <---------GLK1(2)  --------->ZAT14 ------HVH21       ----------->GT1  <---------GLK1(2)--------->MYB52(2)    --------->TOE2(3)        -   caccgacgattcaacaaaacatagtaaaaaacaaagcaaattctttttttctccttagttacttcttctacagattatctcaatcttacagagcaccatg  3699000            <---------MYB46(3)           <---------TOE2(3)  <---------ARR11(3)           <---------YAB1     --------->ARR11(3)                                       ----------->RAV1(1)         --------------------->WRI1                                                   --------->ANAC46      ------->TEIL     <---------ICU4                  ------>ZmHOX2a(1)       <-----------HVH21     <---------CCA1(2)<---------MYB52(1)              --------->TOE2(3)   --------->GLK1(2)         - <-------GAMYB<--------P --------->ICU4             ------>ZmHOX2a(1)    <---------GLK1(2)        <-- ---------MYB46(3)   <-----------TGA1         <<<<<<<<<TBF1         <----------DOF2 --------->AtMYB61 ----->ZmHOX2a(2)    <-----------HVH21    ------>ZmHOX2a(1)   ------->TEIL<---------ARR14(2)---------   gatcgttgtatctatggttgctccgtcattactatcttcttctccttcttcttcctcctcaatgcatccgctttagaatcgggtcaccacaacataactg  3699100                                                                   --------->STY1(2)                                                                   <---------STY1(2)                                          <---------GLK1(2)        <---------ZAT2   <-----------HVH21                   ------>ZmHOX2a(1)           --------->ZAT2  ----------->GT1               <---------At4g35610              ------>NtERF2 <---------MYB46(3)             --------->At4g35610             --------->DEAR3(1) <---------DEAR3(2)           <---------CCA1(2)         <---------ZAT18 -------->ETT(1)            --------->TOE2(1)           --------->ZAT14 ---------HVH21             --------->TOE1(1)           <---------ZAT14 >MYB52(1)                 ------>ZmHOX2a(1)          --------->ANAC46                           ----   ggtcgggtcaaataaactcaaactccgtcctcgtagctctcctcgattctcgttacactgaactcgccgagctagttgagaaggctcttcttctccaaac  3699200             <------MYB83             <------MYB46(1)                    <---------ATHB12           --------->LBD16             <---------MYB46(3)            --------->ANAC58              <---------LBD16  <---------ANAC58            <---------AtMYB61              --------->ANAC58           <---------WRKY18(1) <---------ANAC58           <---------MYB52(1)         --------->PCF2                 --------->WRKY12    <---------MYB46(3)          <-------GAMYB               --------->ANAC46               --------->WRKY38(1)--------->ARR14(2)        <------NtERF2             <-----------GT1---------->DOF2     ----------->HVH21  <---------ARR14(2)       ------>NtERF2         <---------YAB1--------->ANAC55(1) ----------->HVH21   <-----------GT1 --      --------->ANAC46     <-----------GT1 --------->ANAC46  <---------ANAC58--------->ARR14(2)    -- ----->TOE1(2)           --------->YAB1  <---------ALFIN1    <---------ANAC58<---------ARR14(2)    --   cctcgaagacgccgttggtcgtcacaatattactattttcgccccacgcaatgaagcactcgagcgtgaccttgacccggattttaaacggttcttgctc  3699300  Previous    Next  AGI:  At3g11700.1    Description:  FLA18 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 18 PRECURSOR). Identical to Fasciclin-like arabinogalactan protein 18 precursor (FLA18) [Arabidopsis Thaliana] (GB:Q93W32;GB:Q9SRM7); similar to FLA17 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 17 PRECURSOR) [Arabidopsis thaliana] (TAIR:AT5G06390.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39905.1); contains InterPro domain Beta-Ig-H3/fasciclin (InterPro:IPR000782) Range:  from: 3698845    to: 3701499    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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