Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             ------>NtERF2                                                        --------->LBD16                                                        ------>NtERF2                                                       --------->ANAC46                                                      <---------LBD16                                                     <---------ATERF1(1)                                                    --------->ARR14(2)                                                  <---------ATERF1(1)                                                  <-----------HVH21                                                --------->LBD16                               <------                                               --------->DEAR3(1)                             <------                                          <-----------HVH21--------->ANAC58                ----------                         <---------LBD16--------->HSFC1(2) --------->ANAC58                ----------                         --------->At4g35610 <---------At5g28300 <---------ATHB12     --------->MYB52(1)                         <---------At4g35610<---------ALFIN1 --------->MYB46(3)   <------ZmHOX2a(2) ---------ARR11(3)------->GAMYB         <---------HSFC1(2)--------->DEAR3(1)     <---------ARR11(3) -----GT1      --------->MYB52(1) <------ZmHOX2a(1) <---------ARR14(2)           --------->ARR11(3)   tagagcttcttgagacacaacggagacagcgggagaggaagaagcttcaccgcgtctccgccagccaatgaagagtctatggagatcaaaacggtgacgt  3650900                                                                      ------->TEIL                                               --------->At4g35610 <---------ANAC55(2)                                            ----------->RAV1(2)    --------->ANAC58                   <---------ANAC46        ------->TEIL            --------->ANAC55(1)                 <---------ATERF1(1)     <---------SPL7            --------->ANAC46               ---               <---------ANAC58         <---------ANAC58           <---------O2                  ----               --------->ATERF1(1)      --------->ANAC55(2)        --------->ANAC58              ----               <------NtERF2            <---------ANAC58        <---------REM1(2)      --------------               <---------ANAC58        --------------->AtSPL3 <---------WRKY38(1)      <-------------               ----------->RAV1(2)     <---------TOE2(3)      <---------WRKY12        --------------- ---ANAC46    ------>NtERF2            --------------->AtSPL8 <---------WRKY45        --------------- ---bZIP60(2) <---------ATERF1(1)    ----------->HVH21  ------>ZmHOX2a(1)<----------DOF2   --------->YAB1 ->HVH21   <-----------HVH21       <----------DOF2 <---------ALFIN1--------->ANAC55(2)--------------- ->TGA1 --------->MYB52(1) --------->ALFIN1--------->ARR14(2)--------->WRKY18(1)  <---------ZAT6 <---   tgaaagaaaacaacgtcgcctgcgtcgaggtgtttgtctttgacgtacctgctccatcctttggtcaacacgtagctttggctactgttccaataagagt  3651000                                                                                 --------->RAP2.6(2)                                                                                 --------->DEAR3(1)                                                                                 <---------ATERF1(2)                                                                                 --------->ATERF1(2)                                                                                --------->ERF1                                                                    --------->TGA2(2)                                                                   <-----------HVH21         <-------                                                                   <-----------TGA1          --------                                                                  --------->ANAC58 <------NtERF2                                                                  --------->bZIP60(1)    --------->ICU4                                                                  <---------O2  --------->RAP2.3(1)                                                                  --------->TGA1a--------->RAP2.3(2)                                                                  --------->bZIP60(2)  <--------HAHB4                                                                  --------->ANAC58------>NtERF2                                                                  <---------TGA1a--------->ANAC46                                                                  <---------bZIP60(1)  --------->ATHB51                                                                  --------->ANAC55(2)  <---------ICU4                                                                  --------->O2 <---------ATERF1(1)                                                                  <---------ANAC55(2) <---------YAB1                                                                  --------->ANAC46<---------RAP2.6(3)                                                                 <-----------bZIP910(1)--------->YAB1                                                                 ------>NtERF2 --------->At4g35610 --                                                                 <-----------STF1--------->RAP2.3(3)                                                               <------NtERF2----------->RAV1(2) -----                                                           <---------ATERF1(1) <---------At4g35610<--                                                          <---------DEAR3(1)<---------At4g35610------ ------>At4g35610            ------>ZmHOX2a(1)            --------->O2 --------->At4g35610<---------ICU4 ----->GLK1(2)     ----------->HVH21                      <---------O2 <---------At4g35610--------->YAB1 ----->ARR14(2)  <---------ANAC58                       <-----------HVH21   --------->At4g35610<----- ->AGL15         <---------ANAC58         <---------HSFC1(2)--------->ATERF1(1)------>NtERF2--------- --AGL15         <---------AtLEC2         <---------HSFB2a(1) ------>NtERF2--------->ANAC46 <-------- -->AGL3   <---------ALFIN1  --------->HSFB2a(2) ===========================bZIP_DOF  --------->ICU4 -->AGL1 ====================RAV          --------->HSFC1(2)<------NtERF2 <---------LBD16<---------YAB1 -->AGL2 ----------->RAV1(1) <---------HSFB2a(2) <----------DOF2<---------ALFIN1--------->ATERF1(1)-- ------ARR14(2)  ----------->RAV1(2)      --------->HSFB2a(1)--------->ANAC46 --------->DEAR3(1)<----   atctgaatttccaacacttgcctgactcatcctcgaagctaagaagcatccctttctccgtcgtcgccacgtcatctccgctgccgccattattattatt  3651100                                                                        <---------ANAC46                                                                        <---------ANAC58                                                                   <---------ANAC58                                                                   <---------ANAC46                                                                   <---------ANAC58                                                                  <---------DEAR3(2)                                                               <-----------HVH21                                                              --------->DEAR3(1)                                                              <---------O2                                                              <---------TGA1a                                                              --------->TGA1a --ICU4                                                       <---------bZIP60(1) ->YAB1                                                       --------->O2 ------->ATHB12                                               --------->bZIP60(2) ---->YAB1                                                    <---------bZIP60(2) -------YAB1             --------->ALFIN1                     --------->bZIP60(1) --->ICU4              <---------ANAC58                       --------->ANAC46 ----YAB1              <---------ANAC46                <----------DOF2  <---------ANAC58 >ICU4                 <---------ANAC58                =================bZIP_DOF     <---------HSFB2a(2) -YAB1                <------NtERF2                   <---------ANAC58<------MYB83   --------->HSFB2a(2) ------->ATHB51     <---------DEAR3(1)                <---------ANAC58<------MYB46(1)--------->HSFC1(1) -----ICU4         <---------LBD16               ----------------------->TaNAC69(2)  <---------HSFC1(1)   attattgagagggaagtatttctcggcgtgttgttttggtatgactaagcggtttagctttccgacgtcgcttggtgtgagtgatttctcgaacaaagac  3651200                                                                        --------->ARR11(3)                                                                --------->WRKY12                                                                --------->WRKY38(1)                                                               <---------WOX13(1)                                                             --------->ATHB12                                                             <---------MYB46(3)                                                            <---------YAB1                                 <---------YAB1             --------->ICU4 <----------DOF2    <------                                 --------->ICU4     <---------ANAC46    <---------ARR11(3)    <------                        <---------AtMYB61         <---------ZAT14   ----------->HVH21    <---------ANAC46                --------->bZIP60(2)               --------->ZAT14  <---------WOX13(1)    <---------ANAC58               <-------TEIL <---------MYB46(3)   --------->ALFIN1<---------WRKY18(1)     <---------ANAC58   tctcgttgtgctatagctacgtcgttttggtggtgatgatgcaacgagagagtgttgtggtaatggttgactgacatctttttttttggtttcttggagt  3651300                              <---------AtMYB61                              --------->MYB46(2)                              --------->MYB111(2)                              --------->MYB55(2)                          <------MYB83                          <------MYB46(1)                          <---------MYB46(3)                         <---------AtMYB61                        <--------P<---------MYB46(3)                      --------->ALFIN1---------->DOF2                    <---------At4g35610                  <-----------RAV1(2) *TSS                            <---------YAB1              --------->GLK1(1)<---------ANAC46                     <---------ZAT6             --------->ARR14(2)<------MYB46(1)        <---------------AtSPL3             <---------ARR14(2)<------MYB83  --------->CCA1(2)    ----------->GT1                   - ---ANAC58  <------ZmHOX2a(1) --------->MYB111(1)     <---------------AtSPL8                   ------ ---ANAC58 ----------->ARR10  <---------MYB46(3)      --------------->AtSPL8---------->DOF2  --------   gagagagagagagaggatttgcaggtgttggtttggtggtgaaagagagatgggtaatggtactaatatagtattatacaaaggagagagacagagagtg  3651400                                                                                                   <-                                                                                                   --                                                                                                  ---                                                                                            ---------                                                                                            <--------                                                                --------->ANAC58            <--------   <------------CBF                                             --------->ANAC46            <-------- --------->AHL20(1)                                             --------->ANAC58            <-------- --------->AHL20(2)                                        --------->ANAC58                 <-------- <---------AHL20(2)                                        --------->ANAC58         <---------TOE2(3) -------->AHL20(2)                                        --------->SPL7            <---------TOE1(3) ----->GT1        <------------CBF                       <------ZmHOX2a(1)     <----------DOF2   <--- --->GT1    ----------->GT1     <-----------RAV1(1) <------ZmHOX2a(1)   <---------MYB52(1)  <--------   aaaaaaattgaaaatggttaaattgatgtgaaaactgtgggaactatttgatgaggagaggacgacacgataccgatagtacttttaaggttttgcgtga  3651500                       <---------AHL20(2)                     <---------AHL20(2)       <----------DOF2<---------YAB1   <-----------GT1 <---------YAB1 --------ARR11(3) <---------AHL20(1) ------->ARR11(3)<---------ICU4 ------>YAB1    <---------YAB1 >ANAC55(2)     --------->ICU4 -ANAC55(1)   <---------ICU4 -ANAC46      -------->ATHB1 -AtLEC2      --------->YAB1                       <---------REM1(1)          --------->AHL20(2) -ANAC55(2)   <--------HAHB4                       <-----------RAV1(1)        <---------AHL20(2) -ANAC58     --------->ICU4<---------AHL20(2)      <---------MYB46(3)     <---------AHL20(2) ------YAB1  <---------ATHB12         <----------DOF2                    --------->AHL20(1) -ANAC58   --------->WOX13(1) <-----------GT1   <-----------RAV1(1)      <---------AHL20(1)   tgatatttcctttcaatcattatttttatttttttctcttcttttctatattgttgttgcagtccataatccatatatatttaaaaatgtggtattgttt  3651600                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                    =                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                  ---                                                                                                 ----                               --------->ANAC46                                                ------                               --------->ANAC58                                               <------                               --------->ANAC58                                             ---------                              --------->RAP2.6(3)                                         ---------->DOF2                             --------->MYB52(1)                                           ===========                           =====================HOX2a_HOX2a                          --------->ANAC58                           ------>ZmHOX2a(1)      --------->ZAT18                    --------->ANAC58                        ---------->ID1    ------>ZmHOX2a(2)                        ----------->RAV1(1)                        <-----------------AGL1    <---------ZAT14               --------->ANAC58-----                  <---------ARR11(3)     <------ZmHOX2a(2)              ---------->DOF2--------->ANAC46               --------->AHL20(2)       --------->ARR14(2)              =============================            ----------->GT1======================HOX2a_HOX2a     <---------ZAT6 --------->ANAC46<----   <-----------GT1--------->ARR11(3)    <---------ARR14(2)       ----------->GT1--------->ANAC58-----   ttttttttctcgtctgataaaatcttgtcctaaacggcattggatccacgagtgttctatagttatagtgtaaaaaaagagtaagccacacaaaacgccg  3651700  ----------->HVH21 -------->bZIP60(2) ---------O2 -------->TGA1a ==================bZIP_DOF ---------bZIP60(1) -------->bZIP60(1) -------->ANAC58                                                 --------->AHL20(1) -------->O2                                                     <---------AHL20(1) ---------ANAC55(2)                                           <---------AHL20(2) -------->ANAC55(2)                                           --------->AHL20(2) -------->ANAC58                                          <---------AHL20(2) --->NtERF2                                               <---------ICU4 ------->HVH21  <---------TOE2(3)                         --------->ATHB51 --->DEAR3(1)  ---------->DOF2                           <---------YAB1 ---LBD16     --------->AHL20(2)                         --------->ICU4 >ANAC46<----------DOF2                               <---------AHL20(2) =========bZIP_DOF                                  ----------->GT1 ->NtERF2 --------->AHL20(2)                        <---------ANAC55(2)                     --------- =========bZIP_DOF       --------->DAG2             --------->ANAC55(2)              <---------ANAC46 --NtERF2 <---------AHL20(2)                     --------->GLK1(2)    ----------->GT1<---------ANAC58 ---->LBD16   <---------AHL20(2)             >>>>>>>>>TBF1--------->AHL20(2)         <---------ANAC58   cgacgtaaccctttaattaaagttgaaaaggttttgatcatgtagaagaagaatatgtaattatttatatattagtaaaatttgatgtcttggaatgtta  3651800  Previous    Next  AGI:  At3g11580.1    Description:  DNA-binding protein, putative. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G06250.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO15860.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) Range:  from: 3648930    to: 3651338    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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