Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   <---------DEAR3(1)                                                               <-----------HVH21                                                               ------>NtERF2                                                              --------->DEAR3(1)                       <---------ALFIN1                       <---------ANAC46                   --------->DEAR3(2)                         <---------DEAR3(1)              --------->LBD16                              --------->ANAC46      <---------ANAC58             --------->HSFB2a(2)                         --------->MYB52(1)      <---------ANAC55(2)            ------>ZmHOX2a(2)                           ----------->HVH21        <---------ANAC46           <------ZmHOX2a(2)                           <-----------HVH21         --------->ANAC55(2)          <---------ARR14(2)                          --------->ANAC46 ------->TEIL          --------->ARR14(2)                          --------->bZIP60(2)        <---------ANAC55(1)          --------->ARR11(3)                    <---------ANAC58 --------->DEAR3(1)          <---------ARR11(3)                    <---------ANAC46--------->ATERF1(1)         <------ZmHOX2a(1)                      <---------ANAC58<------NtERF2    <---------ANAC58 ------>GAMYB<---------HSFB2a(2)    --------->YAB1  <---------ALFIN1<---------MYB52(2)             -- ----->MYB52(1)    --------->MYB46(3)        <---------ARR14(2)<---------ATERF1(1)--------->LBD16 ---   aacgaaaaccaggatccagaaaccgacactcttctccataataagaggtttcgtccacatcacggcgtcgacgaacccatcttccgtatgaatagtcgca  3647100                                                                                       ------->GAMYB                                                                                  <------ZmHOX2a(2)                                                                                  ===================                                                                                 --------->ARR11(3)                                                                                 <---------ARR11(3)                                                                           ------>NtERF2                                                                           <---------RAP2.6(3)                                                                           --------->LBD16                                               --------->ARR14(2)         --------->RAP2.6(2)              <----------DOF2         <------NtERF2                       --------->ATERF1(2)        <---------ARR14(2)           ------>NtERF2                        <---------ATERF1(2)        --------->ARR14(2)           ----------->RAV1(1)                 --------->ATERF1(1)      <---------DEAR3(2)           ------>NtERF2  --------->ANAC46       --------->RAP2.6(3)    <------NtERF2               <---------HSFB2a(2)--------->LBD16       <---------LBD16  <---------DEAR3(1)      <---------TOE1(3)    <---------ARR14(2)       --------->ZAT2--------->MYB46(3) ------->ANAC46        <---------MYB52(1)      --------->GLK1(2)        <---------ATERF1(1) ------>SPL7------>ZmHOX2a(1) <-------TEIL --------->YAB1  --------->CCA1(2)<------NtERF2    --------   tacgtcgtcgtttcctctttccttcgttagggttcggggcgacaataagaatccgaaacagagatgaggctcgaagccggcaagatcaacgacgataaca  3647200                                      --------->AHL20(2)                                           <-                                  --------->MYB46(3)                                               ==                                ----------->RAV1(1)                                                --                             ------>ZmHOX2a(2)                                               --------                            <------ZmHOX2a(2)                                                <-------           <------MYB83    --------->ARR11(3)                                                <-------        ============================HOX2a_HOX2a                                              --------        ===========================HOX2a_HOX2a                                               <-------        <------ZmHOX2a(1)  <---------ARR11(3)             <---------TOE2(3)        --------->CCA1(2) ==============HOX2a_HOX2a--------->GLK1(1)    <---------ANAC58           <----------ID1     -------- ->MYB52(1)<------MYB46(1)<---------GLK1(1)    <---------ANAC58      ---------->DOF2    ----------->GT1   gagaatattaggaaggtgatgagaagagagatcccaacaaatatatgtttcttgattttcaacgttgagaagaaaggagacgaagatagagagaaaatct  3647300       --------->ARR14(2)                         --------->O2       <---------ARR14(2)                         <---------ANAC55(2)      ============================HOX2a_HOX2a     <---------ANAC58      <------ZmHOX2a(1)                           <---------TGA1a              <----------DOF2   <---------At4g35610                            <---------ANAC58         ------>ZmHOX2a(2) ----------HVH21                                  --------->TGA1a         <------ZmHOX2a(2) =================================HOX2a_HOX2a     <---------O2           --------->ARR11(3) ---->ZmHOX2a(1)                                  ========================================bZIP_DOF ->ARR14(2)                      ------->TEIL     ----------->GT1      ----------->ARR10 --ARR14(2)                ------>ZmHOX2a(2)      <---------ANAC46 --------->At4g35610 ----ARR10             <---------YAB1            <-----------------------TaNAC69(2) ->GLK1(2)           --------->YAB1  <---------ANAC58          --------->ARR14(2)   <---------ANAC58 --ARR11(3)         --------->ICU4   <---------ANAC46          <---------ARR14(2)   <---------ANAC58 ->ARR11(3)         <---------YAB1   <---------ANAC58     ----------->GT1<---------ARR11(3)----------   ccttcagaggatttgattcttgatgatgatccatgtatgtcgtatagaagagacgtgaaaatgtgaatatgctgcgatcttcttttgcgagagaaaagtc  3647400                                         --------->AHL20(2)                                        <---------AHL20(2)                                        --------->AHL20(2)                                        <---------AHL20(1)                                       --------->AHL20(2)                                       <---------AHL20(2)                                    <---------AHL20(2)                                    --------->AHL20(2)                                    --------->AHL20(1)   --------->TOE2(3)                               <---------MYB52(1)    --------->WOX13(1)                              --------->TOE2(3)     <-------TEIL                             ----------->GT1       <------ZmHOX2a(2)                            <-------TEIL--------->AHL20(1)                        <---------AHL20(1)        --------->AGP1                        --------->AHL20(2)        --------->ARR11(3)  <---------ICU4        --------->AHL20(1)        <---------ARR11(3)             ---------->DOF2    -  <---------AHL20(2)    <---------AHL20(2)  <---------AHL20(2)          ----------->HVH21         <-- --------->AHL20(2)    --------->AHL20(2)<---------AHL20(2)            <-----------HVH21   --------->AtLEC2 >DOF2            ----------->GT1   <---------AHL20(1)  --------->YAB1--------->O2     <---------YAB1   ttaataaatatgtttctgtagggaaataaattcgttaataaattaatttatagatccatcatcaattcatccatgtgacagacaaaagtattaatgcaaa  3647500                    <---------ANAC46                                                             <---                   <---------TOE1(3)                                                             ----                   <---------TOE2(3)                                                             <---             --------->AHL20(1)                                  <----------DOF2                 ----             <---------AHL20(2)                   --------->MYB52(2)                             ----             --------->AHL20(2)                  <-------TEIL --------->ARR11(3)                 <---      --------->ANAC46                          *TSS         <---------CCA1(2)              ---------    ----------->RAV1(1)  --------->YAB1      <---------TOE1(2)<---------ARR11(3)            ========= ------>TEIL--------->AHL20(2)              --------------------->WRI1                      --------- -----TEIL  <---------AHL20(2)       --------->ZAT14    <-----------GT1              <---------AHL20(2)   tgcatcccacataattttattaacgtatagtaatagaagtttactcccatgttcgtttctactatatcttttagatcgagacgagttttaatttcccaat  3647600                                                                              <---------ICU4                                                                        --------->YAB1                                                                       <---------YAB1  ---------->DOF2                                                    --------->YAB1 ------AHL20(2)                                                      -------->HAHB4 ----->AHL20(1)                                                     --------->ICU4 ------ARR11(3)                      ------------>CBF               <---------YAB1 ----->ARR11(3)                     --------->TOE2(3)    --------->GLK1(2)   <---------YAB1      <--- ----->AHL20(2)               ------>ZmHOX2a(1)          <-----------ARR10--------->ICU4        ----- ------AHL20(1)              --------------->AGL15       <---------ARR14(2)<---------ICU4      ------ --->CBF                     --------->TOE2(3)      <---------YAB1  <---------ATHB12           <----- ============================================MADS_MADS   --------->ARR14(2)--------->YAB1     <------ ------>AGL15             <-----------GT1     <---------YAB1       <---------TOE2(3)       ------>ZmHOX2a(1)   atattaaagctgtagtatagcaaactaatttccttatacatcaatttgatgattctgagtatctaatctaatgataataatcaatgcattgtcctaatcg  3647700                                                                                    --------->ARR11(3)                                                                                    --------->ARR14(2)                                                                                    <---------ARR14(2)                                                                                <------NtERF2                                                            <---------YAB1      <---------At4g35610        <---------YAB1                                     --------->AHL20(2)   --------->LBD16      --------->YAB1                                     --------->AHL20(2)    ----------->RAV1(1)     <---------YAB1                                  --------->YAB1           --------->ZAT18 ------MYB52(1)                                    ------>MYB46(1)     <------ZmHOX2a(1)            - ---->TOE2(3)                                      ------>MYB83      --------->ANAC58     ----------- --->YAB1                    --------->CCA1(2)     -------->P        --------->ANAC58--------->CCA1(2) ----ICU4     <---------ARR11(3)                 --------->DEAR3(1)  <---------TOE2(3)    <---------ANAC46 ---ATHB12    --------->ARR11(3)         <-----------ARR10 <---------AHL20(2) <---------LBD16      <-   ttattctatgatgaaagatagttgatgagagatttaagttgaatttcttcgcctaccatattaatatagataaggaatagcccgcagatatagtgtatat  3647800           --------->AHL20(2)                                                      <---------ANAC58           --------->AHL20(1)                                                 --------->ARR14(2)           <---------AHL20(2)                                           <-------MYC4          --------->AHL20(2)                                            ------->PIF5          <---------AHL20(2)                                            ------->MYC3      <---------AHL20(2)                                                ------->MYC2      --------->AHL20(2)                                                <-------PIF5      <---------AHL20(1)     <---------LBD16                            <-------MYC2  <---------YAB1             <---------ANAC46           --------->AtMYB61     <---------ARR14(2)  <---------AHL20(2)     <---------DAG2                 <---------ALFIN1<-------PIF4              <--  --------->AHL20(2)  ------>MYB46(1)       <---------ARR14(2)          ------->PIF4              --- -------->CCA1(2)     ------>MYB83          --------->ARR14(2)          <-------MYC3<----------DOF2 >GT1 --------->AHL20(1) <----------DOF2    --------->GLK1(2)   --------->ANAC46   <---------ANAC58 --------ARR11(3)   <---------MYB59<---------AtMYB61   --------->MYB46(3)   <---------YAB1        <--   agatataattaattaaattggaccgaacttttcgggtatggtcgagtatccattaccaccactcacaagtagcacatgctgatttgctttacaatttcaa  3647900                                 ---------->DOF2                             <---------YAB1                          <---------YAB1                        -------->ATHB1                        <---------ICU4 -------AHL20(1)        <--------HAHB4                            --------->YAB1   --------->ZAT6   < ------>AHL20(1)        --------->YAB1             ----------->TGA1     <---------ZAT14  ---------->DOF2 -------ARR11(3)       <---------ATHB12 <----------DOF2        --------->YAB1  <---------MYB52(2) ---   tatttttaaaaatccctattggtgaatcattatactaaagagcattaatgggaatgacgaaacaactataagagtgaagaaacaaacactaaaaaggcat  3648000  Previous    Next  AGI:  At3g11570.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G06230.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61015.1); contains InterPro domain Protein of unknown function DUF231, plant (InterPro:IPR004253) Range:  from: 3645028    to: 3647548    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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