Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       <-------GAMYB                                     --------->At5g28300                                    ----------->GT1                       <---------ANAC55(1)  <----------DOF2                ---------->DOF2     <---------MYB46(3)                      --------->HSFC1(2)              --------->ANAC58      <---------DEAR3(2)                      <---------HSFC1(2)      --------->At4g35610          <---------ANAC46 ------>ZmHOX2a(1) --------->GLK1(2)        ------ <---------HSFB2a(2)   <---------ANAC46  <---------TOE1(3)            <---------ARR14(2) <------NtERF2 --------->HSFB2a(2) --------->CCA1(2)<---------MYB52(1)    --------------->AGL15      <---------ETT(2) ---ANAC58    --------->ANAC46     <---------DEAR3(1)      ----------------->AGL3   <-----------RAV1(1) ---ANAC58    --------->ANAC58<-----------RAV1(1)------>ZmHOX2a(1)    --------->ARR14(2)------>NtERF2   tttctagcaactgagcacgaaagttacgagtaatggggcggttaagctttcctccttcgactccaataagagaatcgacgtttccaatgtcgccaagagc  3626900                  <----------DOF2                 <---------ANAC58                                          --------->CCA1(2)                 <---------ANAC46                                         <---------ARR14(2)                 <---------ANAC58                                         --------->ARR11(3)             <---------ZAT2                          <-----------GT1  --------->YAB1             <---------At4g35610                   <---------AHL20(2)<---------ATHB12             --------->At4g35610              --------->AHL20(2)    ------>MYB83  ------>ZmHOX2a(2)             --------->ZAT2             <---------ANAC55(2)         ------>MYB46(1)--------->TOE1(2)            <-----------RAV1(1)         ----------->RAV1(2) --------->ANAC58     <------ZmHOX2a(2)         <-----------RAV1(1)            --------->At4g35610 --------->ANAC58    <---------ARR14(2)       <----------DOF2                  --------->ANAC55(2) --------->ANAC46    --------->ARR14(2)    --------->GLK1(2)                   <---------At4g35610--------->DAG2 --------->ARR11(1)   <-----   <---------GLK1(2)     <---------TOE2(3)    <---------AHL20(2)-------->P--------->ARR14(2)   <----- --->ZAT18<---------At4g35610        <------ZmHOX2a(2)    ---------->DOF2 <---------ARR11(3)   ------   acgacgattctttgctgctgcgtttttgaggtcgatgggatcacctgataaattttaacaaaaagcaacctatcaagatttggatccttggaaaacagat  3627000                                                                 ----------->GT1                                                                 <---------ZAT6                                                              ------>ZmHOX2a(1)                                                            ------>ZmHOX2a(2)                                                           <------ZmHOX2a(2)                                                          <---------ARR11(3)       <---------ATHB12                                   <---------ARR14(2)  --------->ANAC46                                        --------->ARR14(2)  --------->ANAC58                <-------TEIL            --------->ARR11(3)  --------->ANAC58             ===================================HOX2a_HOX2a ----ARR14(2)                  ====================================HOX2a_HOX2a            ----------- ----GLK1(2)--------->YAB1     <------ZmHOX2a(1)         <---------At4g35610       <---------At4g35610 --->ARR14(2)              ---------->DOF2               <---------GLK1(1)      <-------TEIL     <---   ttgtaagcaatctttgataacatctaaataaaaggattcatagatgagagtttttatgcagatcctagagttaaaacaaagattcatcagaggggagaaa  3627100                                                <-----------RAV1(1)                                            <---------GLK1(1)                                          --------->ATHB12                                          <---------ICU4                                         --------->ICU4                                      <------NtERF2                                         <XXXXXXXX                                     ------>NtERF2                                         --------->HSFB2a(2)                                    --------->ETT(2)                                       <---------HSFB2a(2)                 <------ZmHOX2a(1)  <---------ETT(2)                                       <---------HSFC1(1)  --------->TOE2(3)              ------>ZmHOX2a(1)                                     --------->GLK1(1) >GT1       <--------P --------->MYB46(3)<---------YAB1                           --------->DAG2 ------MYB52(2)<---------TOE2(3) <-----------RAV1(1)              <---------YAB1--------->CCA1(2)   caaacctctaactggttgaggatgaacaactggtcctgtcgccatgatttctggtgttttcaaactctctgattactccaagataaggggtttctagatg  3627200                                                                                       -------->ATHB1                                                                                       <---------ICU4                                                                                       --------->ATHB12                                                                                       --------->ATHB51                                                                                      <---------ATHB51                                                                                      <---------AHL20(2)                                                                                --------->At5g28300                                                                      --------->ARR14(2)                                                                   --------->YAB1 <---------WRKY12                                                               ---------->DOF2  <-----------HVH21                --------->CCA1(2)                         <---------------AGL15----------->GT1             <---------TOE2(3)                            --------------->AGL15*TSS   --------->ICU4          <---------WOX13(1)                             ----------------->AGL3------->GAMYB        --------->ATHB12         --------->MYB52(1)   --------->ATERF1(1)   --------->MYB52(1)-------       <---------YAB1          <----------DOF2        <------ZmHOX2a(1)  --------->ANAC46   <--------     <------ZmHOX2a(1)     <---------ZAT18          --------->ALFIN1  <---------ICU4  --------->AHL20(2) XXXXXXXXXXXXMIR774B*      --------->ZAT18         <------ZmHOX2a(1)  <---------ARR14(2) <---------YAB1   agaagaaggatgattgagatttgagagagagcgcttaagggatagagaagagaggaggagccattaaaagcataatcgcaacggtcaaattattagcggg  3627300                                                                              <-----------GT1                                                                             <-------TEIL                                                                            --------->CCA1(2)                                                                           --------->ARR14(2)                                                                           <---------ARR14(2)                            --------->AHL20(2)                    >>>>>>>>>ARR2                          <----------DOF2                         >>>>>>>>>ARR2 --------->ANAC58                          --------->TOE2(3)                       >>>>>>>>>ARR1 --------->ANAC58                        ------->TEIL                              <------------CBF   <-----------HVH21               <---------MYB46(3)               <------ZmHOX2a(1) >>>>>>>>>ARR1 --------->ANAC46 -->LBD16    <---------MYB52(1)          <---------MYB46(3)      <------ZmHOX2a(1)  <----------DOF2-- -LBD16    <---------MYB46(3)      --------->MYB52(1)    ---------->ID1  ----------->ARR10   --------   attagacttctagccgttggatgatgaactttaaatctaacggtggataaggaggttttgtcttataggattgtgaagattcacgcctttcacacactta  3627400                                                                                    <----------DOF2                                                                               <<<<<<<<<MYB2                                                                           <---------WOX13(1)                                                                         --------->ATHB51                                                                         --------->ATHB12<----------DOF2                                                                        <---------YAB1   ------------                                                                      ------>ZmHOX2a(1)  <-----------                                                                      --------------->AGL15                                           ----------->HVH21          <---------------AGL15                                <---------ANAC58                     ----------------->AGL2                                <---------ANAC58                     ----------------->AGL3                   <-----------GT1         <---------ZAT6            <-----------------AGL3               --------->AHL20(2)   ----------------->AG             ================================ ------->YAB1  <---------YAB1 <-----------GT1                        <-----------------AGL2     <---- ->ANAC55(1)   <---------AHL20(2)   =================================================================   atgacaaggtccgagttttaattactggtttatttcttcccattagtgacaagtttggagtttgatttcttcctataattggttttcttttcttttttaa  3627500                                            ----------->RAV1(1)               --------->MYB52(2)      --------->ANAC58                      <---------ALFIN1                 <---------TOE1(2)      --------->ANAC46                      --------->AtMYB61              <---------SPL7      --------->ANAC58                   --------->ANAC46                 <---------MYB46(3)    ---------->DOF2                      --------->ANAC58              <------MYB83   <---------WRKY38(1)                   --------->ANAC58              <------MYB46(1)   <---------WRKY45                     --------->ZAT18            --------->ATHB12 --->AGL15  --------->TOE2(3)           <---------ZAT18          <---------TOE2(3) ----AGL15 ----------->GT1     <---------DAG2                   ---------->DOF2 <---------MYB52(1) ====MADS_MADS                 --------->TOE2(3)     --------->AtLEC2 <---------AtMYB61 -----TOE2(3)               <-----------GT1--------->ANAC46    --------->AHL20(2)              ------ ====MADS_MADS --------->AHL20(2)     --------->At4g35610<---------DOF5.7(2)<---------MYB52(1) <-----   gggagtcaaagcaacgtttaaatattgttatcaccttattagcacaccacagttcatgtaaacgattaaagattggtcgttcgttttttgtttgaattta  3627600                    --------->ANAC58           <---------ALFIN1          --------->MYB46(3)                      >>>>>>>>>>>>>>>>>LFY         ------->TEIL ---------->DOF2            <-----------GT1        <-----------GT1 --------->DAG2       --------->AHL20(2)     --------------->AtSPL8                  <---------AHL20(2)                    --------->YAB1 <---------AHL20(2) --------->ANAC58       <---------YAB1              <----------DOF2 --->AHL20(2)       --------->ANAC46   <----------DOF2                 <---------DAG2------->TEIL ----AHL20(2) <---------DAG2           <---------DAG2           --------->ARR11(3)<---------ATHB12   tattttatatgaaccaccttacaagaaaggtagcattctcactttattaatataccattgttgtaagatagtgctttttatccaatgaacatgggtctct  3627700              --------->RAP2.6(2)                                                                   -              ----------->RAV1(1)                                                                   <             --------->ZAT18                                                                        -             <----------ID1---------->DOF2                --------->ZAT6                        <----      --------->YAB1    --------->ANAC55(2)             <-----------GT1                        ------  <---------AHL20(2)    <---------ANAC55(2)         --------->AHL20(2)      ----------->GT1    ------ <---------AHL20(2)   <-----------GT1              <---------AHL20(2)      <---------TOE1(3)   ------ --------->AHL20(2)   --------->AHL20(2)           --------->AHL20(2)      <---------TOE2(3) <-------   taattaaatcacaaggccacaaaattacttaatgcaatttagtaaacttcgaaataaataactctatgcttaatcttgaggttacatagcaatttgcaag  3627800  Previous    Next  AGI:  At3g11520.1    Description:  CYCB1;3 (CYCLIN B1;3); cyclin-dependent protein kinase regulator. Identical to Cyclin-B1-3 (CYCB1-3) [Arabidopsis Thaliana] (GB:Q39069;GB:Q84MB0;GB:Q9CAX5); similar to CYC1BAT (CYCLIN B 1,2), cyclin-dependent protein kinase regulator [Arabidopsis thaliana] (TAIR:AT5G06150.1); similar to mitotic cyclin [Sesbania rostrata] (GB:CAA99990.1); contains InterPro domain Cyclin (InterPro:IPR006670); contains InterPro domain Cyclin-related (InterPro:IPR013763); contains InterPro domain Cyclin, A/B/D/E (InterPro:IPR014400); contains InterPro domain Cyclin, N-terminal (InterPro:IPR006671); contains InterPro domain Cyclin-like (InterPro:IPR011028); conta Range:  from: 3625330    to: 3627279    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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