Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        ----------->GT1                ----------->GT1              ---------->DOF2 --------->ANAC46            --------->YAB1                 <---------YAB1 >ANAC58                   <---------TOE2(3)               <-----------HVH21 >ANAC58              --------->ANAC58                ---------->DOF2     ---------->DOF2 >ANAC46              --------->ANAC58               --------->YAB1     <-------TEIL   tacacagaaggttatattacacaaacgctaagaataaatgagaaaaaacttacaatgaaagtgtcattgaaagatgcaaagatgtgaacaacaccaaaaa  3624500                                                                          --------->YAB1                                                            <-----------GT1                                                     ------>ZmHOX2a(1)    --------->AHL20(2)                                                     --------------------->WRI1       ------>ZmHOX2a(1)                        ---------->ID1           <---------YAB1   cttgctctccttcacgaacagaaggtccaagagtcacagtctcaacctttggctccttagtttttctcttcgactattatatacagagagaacaaaacac  3624600                                      <---------ANAC55(2)                                      --------->ANAC55(2)                                    --------->AHL20(2)                                    <-----------GT1                                 <--------HAHB4                                 <---------ICU4                                 --------->YAB1                                 --------->ATHB51                                --------->ICU4                                <---------YAB1                           <-----------GT1             <---------ARR11(3)                     <---------MYB52(1)         --------->ZAT2               <---------ZAT14--------->TOE2(3) --------->At4g35610               --------->ZAT18--------->YAB1<-----------HVH21                    -------->P     -----               --------->ZAT14--------->TOE1(3) <---------At4g35610     --------->WOX13(1)   <-------   atttgagaaacaaattgttcactggtatttaaccataattacataccatcagctcaatatcaatacatggagattaatcagacaacccctaaactatgaa  3624700                                                                                               ------                                                                                               ======                                                                                              =======                                                                                              -------                                                                                              <------ZmHOX2a(2)                                                                                             --------                                                                                             <-------                <---------ATHB12                                                             <-------            <------ZmHOX2a(2)                                                                <-------    --------->ANAC58                      --------->MYB52(1)                                 --------    --------->ANAC46                    <---------MYB52(2)                                   <-------    --------->ANAC58                    --------->MYB46(3)                                   <-------  ---------->DOF2                <---------At4g35610                       <------ZmHOX2a(1)<-------- -->TEIL   --------->ARR11(3)    --------->At4g35610                       ==========================HOX2a_HOX2a --YAB1    <---------ARR11(3)<---------AtLEC2                              ==========================   tcagacaagccaagatcaataagtcaattttgcatagctgaaacaaacgtataagtatggaacatcggaaactagcaggactaagtgaaatcgcagatct  3624800      --------->MYB52(1)     ------>ZmHOX2a(1)     =================================HOX2a_HOX2a    <---------MYB59 >ZmHOX2a(2) ===========HOX2a_HOX2a ===========HOX2a_HOX2a -->GLK1(1) ->ARR14(2)                    ------>ZmHOX2a(2) --ARR14(2)                  --------->ARR11(3) --AGP1                      <---------ARR11(3) ----ARR10                 <---------ATHB12 ->ARR11(3)              ------>MYB46(1)                    --------->At4g35610 --ARR11(3)          >>>>>>>>>MYB2                         --------->ARR11(3)                 ------- --ARR14(3)    <---------TOE2(3)                           <---------ARR11(3)                 ------- -CCA1(2)------->GAMYB   ------>MYB83        <-----------RAV1(1)                            --------- =HOX2a_HOX2a --------->MYB52(1)      ----------->GT1  ---------->DOF2            <------ZmHOX2a(2)   caatttcctaacagactaacgaaaaccaaatgatctggcacagaaaaatgttggagagaaagagcttaccatcttcaacaatggatcagagaagagacga  3624900                                                 <---------ZAT18                                               <---------TGA1a                                               --------->ANAC46                                               <---------O2                                               --------->TGA1a                                               --------->O2                                              *TSS ------>NtERF2            ----------->GT1                                              <---------At5g28300           <---------ZAT6                          <---------ZAT6      <---------LBD16        --------->AHL20(1)                    <---------At4g35610      --------->MYB52(1)      <---------AHL20(1)                    --------->At4g35610    --------->ANAC58    --------->ANAC46    --------->ANAC55(2) <---------ANAC46   --------->ANAC58    --------->ANAC58       <-------------- -->ANAC58      --------->GLK1(2)       --------->ZAT18        --------->ANAC58       --------------- -->ANAC58     <---------GLK1(2)       <------ZmHOX2a(1)      ------->TEIL <---------TOE1(3) >CCA1(2)   <XXXXXXXXXXXXXXXXXXXXMIR1887<---------ZAT18----------->TBP     <---------TOE2(3)        <   aacgataagtgtttttagattctgctcagtgtaaacaagaaggacactcacggcgctacaaatgcacgttatatattagggttacatcggagtacctcta  3625000                                                  ---------->ID1                                                 <------MYB83                                                 <------MYB46(1)                                                 <---------ANAC46                                                 <---------ANAC58                                                 <---------ANAC58                                                --------->MYB52(2)                                                --------->MYB46(2)                                                <---------AtMYB61                      <---------ICU4                                                --------->MYB55(2)                     <--------HAHB4     --------->ANAC55(2)                        <---------MYB46(3)                    --------->ICU4     <---------ANAC55(2)                       <---------MYB55(1)             <------NtERF2     <---------ANAC46                         <---------MYB52(1)            <---------DEAR3(1)     ----------->GT1                       <------NtERF2                 <---------ANAC58 <----------    <-----------------------TaNAC69(2)<---------ANAC58                   <---------ANAC55(2)    <---------TOE2(3)                 --------->ANAC55(2)                <---------ANAC58<---------YAB1 -AtSPL3                              <---------ANAC58                   --------->ANAC55(2)<-------- >AtSPL8                  --------->YAB1 <---------DEAR3(1)         <---------ICU4<---------TOE1(2) ------------CBF       <----------DOF2<---------ANAC55(2)     --------->TOE2(3) <---------SPL7   tgaattgacgtaaataccctcatcactttcattacccattacgtcgtcgtttggtgtttttttttcttaaacattacgtcgtcgttcgattattactatt  3625100                                                                -------->ATHB1                                                                --------->YAB1                               <---------MYB52(2)               <---------ICU4                              ----------->GT1                  <---------AHL20(2)                              --------->ANAC55(1)              <---------ATHB51                              --------->ANAC58                 --------->AHL20(2)                              --------->ANAC55(2)    <---------YAB1                              <---------ANAC55(2)<---------GLK1(1)                                  <  ----------->GT1  <---------AHL20(2)     <-----------GT1      --------->ICU4                      -- -GT1       <---------ANAC58  --------->ANAC58   --------->GLK1(1) <---------AHL20(2)             --- -YAB1      <---------ANAC58  --------->ANAC46  <---------GLK1(2) <---------YAB1             --------   agtcttgttaattttcttgatttttttttgacaagtaacaaaattcaccagatttcttattggaaattattatttgacaaatgtgaacaacttcaccttg  3625200  --------->SPL7 ---------SPL7                                                                                 ------ ---->ZmHOX2a(2)                                                                              <------ ------------>AtSPL8                                                      <-----------GT1  --------->GLK1(2) ------------->WRI1          ---------->DOF2   <---------YAB1 <---------AHL20(2)      ---------->DOF2   atcgtaccatcgtacttggtcttatgaagaacaaagaagttttcaagttataacagataactatgtaatttgaatttgactccatagttaaagaatatga  3625300                                                                               <---------ICU4                                                         <----------DOF2    --------->YAB1                     --------------->AGL15          --------->YAB1     ----------->GT1       <------ZmHOX2a(1)<---------YAB1            --------->AHL20(1)  --------->ANAC55(1)      <----------ID1 <---------------AGL15        --------->AHL20(2)  --------->ANAC46    --------->DAG2   <---------YAB1               <---------AHL20(2)  --------->ANAC58   ---------->DOF2--------->GLK1(2)              --------->YAB1       --------->ANAC58              < --->ATHB12      <---------GLK1(2)    >>>>>>>>>TBF1<---------YAB1     <---------ANAC55(2)  --------->ANAC58 ---YAB1  --------->AtMYB61<---------HSFB2a(2)  <---------YAB1       <---------LBD16       --------->ANAC58   tgggaaaaaggaccaaaacgattctgattatagaagagaagaagaatttcattataatacttttgaattcatacggaaacatcatttctcaacaagaacc  3625400  Previous    Next  AGI:  At3g11510.1    Description:  40S ribosomal protein S14 (RPS14B). Identical to 40S ribosomal protein S14-2 (RPS14B) [Arabidopsis Thaliana] (GB:Q9CAX6); similar to 40S ribosomal protein S14 (RPS14A) [Arabidopsis thaliana] (TAIR:AT2G36160.1); similar to cytoplasmic ribosomal protein S14 [Brassica napus] (GB:AAO41731.1); contains InterPro domain Ribosomal protein S11; (InterPro:IPR001971) Range:  from: 3623463    to: 3624946    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g11520.1    Description:  CYCB1;3 (CYCLIN B1;3); cyclin-dependent protein kinase regulator. Identical to Cyclin-B1-3 (CYCB1-3) [Arabidopsis Thaliana] (GB:Q39069;GB:Q84MB0;GB:Q9CAX5); similar to CYC1BAT (CYCLIN B 1,2), cyclin-dependent protein kinase regulator [Arabidopsis thaliana] (TAIR:AT5G06150.1); similar to mitotic cyclin [Sesbania rostrata] (GB:CAA99990.1); contains InterPro domain Cyclin (InterPro:IPR006670); contains InterPro domain Cyclin-related (InterPro:IPR013763); contains InterPro domain Cyclin, A/B/D/E (InterPro:IPR014400); contains InterPro domain Cyclin, N-terminal (InterPro:IPR006671); contains InterPro domain Cyclin-like (InterPro:IPR011028); conta Range:  from: 3625330    to: 3627279    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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