Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     <---------ICU4                                   --------->YAB1                                  <---------ATHB12                                 ------>MYB83                               <---------MYB46(2)                               --------->MYB46(3)                              --------->ZAT6                           --------->MYB46(3)                             <---------HSFC1(2)                           <---------ATHB12                               --------->HSFC1(2)                         <---------ICU4                                   --------->HSFB2a(1)                        ------>ZmHOX2a(1)                <---------ICU4   <---------HSFB2a(1)                    --------->ARR14(2)                --------->YAB1     ------->TEIL                    --------->GLK1(2)     --------->ANAC46      --------->ANAC58                    <---------ARR14(2)   --------->HSFB2a(2)    --------->ANAC58              --------->MYB52(1) ------>MYB46(1)     <---------YAB1 <---------DOF5.7(2)          <---------ARR11(3)<-----------GT1        --------->WOX13(1) <---------MYB52(2) <---------------AGL15--------->YAB1     <---------HSFB2a(2)    --------->ANAC46     <------ZmHOX2a(1)   taactaaaacaagaactaagagaatcctaatcaccaaacattaccagaaacatctatcatcgttacaagtaaacgaaccttgcactaggagctcgtctag  3619200                                 --------->ANAC58                             --------->ANAC58                             --------->ANAC58                        --------->ANAC58            ----------->GT1                    --------->ANAC58               <---------TOE2(3)                        ------>MYB83                    --------->ANAC46  --------->AtLEC2         ----------->HVH21            ------>MYB46(1)                   ------->GAMYB --------->ANAC58---------->DOF2                    =================        <-------TEIL--------->ANAC58  <---------------------WRI1  <---------O2      =================   <-----------RAV1(2)  --------->ANAC58       <------ZmHOX2a(2)----------->RAV1(1) <------ZmHOX2a(1)   ggacttcaggttcaaactcaacaggcaagccaaggaagccatggaaacgatcaaaggtaacatgagcgacatgtctaacatctgtaggaacaccaatctc  3619300                                    --------->YAB1                                   <---------ATHB12                                  ------>MYB46(1)                                 --------->WOX13(1)                       <---------ALFIN1                      ------>MYB46(1)                      ------>MYB83------>MYB83                     ----------->RAV1(1)                   --------->MYB46(3)             ------>ZmHOX2a(1)  --------->MYB46(3)           ------>ZmHOX2a(2)    --------->AtMYB61          <------ZmHOX2a(2)   ------>MYB83                                                --------->HSFB2a(1)         --------->ARR14(3)   ------>MYB46(1)                                            <-----------ARR10         <---------GLK1(2)  --------->MYB46(3)                                           ------->TEIL         <---------ARR14(3) <---------MYB55(2)                                           <---------ARR14(2)         <---------ARR14(2) <---------MYB111(2)                                          --------->ARR14(2)         --------->ARR11(3)--------->ANAC46                                              --------->GLK1(2)         --------->ARR14(2)--------->ANAC58                                              <---------ARR11(1)         <---------ARR11(3)--------->ANAC58    <---------YAB1   --------->GLK1(2)       <---------CCA1(2)       ----------->ARR10------->GAMYB    <---------ARR11(3)     --------->ARR14(2)      <---------ARR14(1)     ---------->DOF2--------->AtMYB61    --------->ARR11(3)    <---------GLK1(2)---------->DOF2 ================HOX2a_HOX2a--------->DEAR3(1) --------------->AGL15        <---------At4g35610 =================HOX2a_HOX2a--------->ANAC46  <---------------AGL15        --------->At4g35610   cattgaacaaagatcctcttcaccaacacacccaccaatcacagaccttctaatagcagaaacaagaatctccaatgcagatgaaagctcgaatctttct  3619400                                                                                               ------                                                                                            ------>NtERF2                                                                                          <---------ANAC58                                                                                          <---------ANAC58                                                                                     --------->ATHB51                                                                                     -------->ATHB1                                                                                     --------->ATHB12                                    ------>ZmHOX2a(1)         --------->GLK1(2)      <---------ICU4                              ------>ZmHOX2a(1)       ---------->DOF2               --------->ICU4              <------------------------ANAC81     --------->TOE2(3) <---------PCF2  <---------YAB1  <----------DOF2    ------>ZmHOX2a(1)           ----------->GT1 --------->ALFIN1 --------->YAB1 <---   ctctctttctcgcttctctcttcctcttcttcctcttcctcacgacgagaaatgttaaaaggagaatgtgggtctctattactaccatcattgcctcctc  3619500                                           <---------WOX13(1)                                        <---------YAB1                           <------ZmHOX2a(1)                  <----------DOF2       --------->ICU4                           --------->YAB1    <---------REM1(1)                 --------->bZIP60(1)             <---------ICU4                <    <---------ANAC46     --------->ALFIN1--------->ATHB12            --------->ICU4                 - >ZmHOX2a(1)   <---------ARR11(3)     <---------bZIP60(1)            <---------YAB1                <- ------ALFIN1  --------->ARR11(3)  ----------->HVH21         <----------DOF2 ---------->DOF2---------   cacatgatgtagaagaagagcttgaaggtgaagggaaatgacatgattggctcgattttagaactttagccattattctcaaaggataatccaaaaaaat  3619600             <---------MYB46(3)            <---------ANAC46         --------->ALFIN1                                               <----------DOF2         ----------->HVH21                                            <---------ATHB12 ---------ARR14(2)                                                  --------->WOX13(1) -------->ARR11(3)                                                ------------>CBF --------CCA1(2)                                 ------------>CBF--------->GLK1(2)            ------- >AHL20(2)--------->ATHB12               ----------->GT1    ---------->DOF2        ---------->DOF2   caaatcttggagtgatgggtactctctgaaaacagtgatggagaggtcaaaatcaatggctataaagaatcaatctttagggggaaaaagagaaaaccta  3619700                                             --------->ATHB12                                             -------->HAHB4                                             --------->ATHB51                                             <--------ATHB1                         <---------ARR11(3)  <---------ICU4                         --------->ARR11(3) <---------AHL20(2)                        --------->YAB1      <---------YAB1                      <---------TOE2(3)     --------->ICU4                    --------->AHL20(2)      <---------ATHB51                    <---------AHL20(2)      --------->AHL20(2)                   --------->ICU4     ----------->GT1              ----------->GT1        ----------->GT1                                               <-            --------->ZAT18          <---------ANAC46                                          ------            <---------ZAT18         <---------LBD16                    <----------DOF2        <------            --------->ZAT14       <---------MYB52(1)                   <---------DAG2        ------>NtERF2 <------------CBF  <---------YAB1<-------GAMYB<------------CBF----------->GT1               <-------- -->TOE1(2) <---------ZAT14     <-----------RAV1(1)        ---------->DOF2               ----------->HVH21   gaaaattggattagtggagtaattaatgatatttctgttggggaaaataattgggaaactcaaaagattaaaactttttgggtattactaagcgacgcgt  3619800                                        <-----------GT1                               <---------ANAC58                               <---------ANAC46                               <---------ANAC58                            <---------RAP2.6(2)                          <------MYB46(1) --------->ZAT6                          <------MYB83 --------->YAB1                          <---------MYB46(3)                         <---------MYB46(3)                         --------->MYB55(2)                         --------->MYB111(2)       --------->GLK1(2)                         <---------AtMYB61<-----------GT1                       <---------ARR14(2)     <------------CBF    --------->MYB111(1)  --------->ZAT14         <<<<<<<<<TBF1 ------>ZmHOX2a(1) --------ZAT6    --------->ARR11(3)    <---------ICU4     <----------DOF2<<<<<<<<<TBF1 <---------REM1(2) --->REM1(2)     <---------ARR11(3)   --------->ICU4     <------------------------ANAC81 ---ANAC46      <------ZmHOX2a(1)----------->GT1------------>CBF   <<<<<<<<<TBF1--------->ARR14(2) -ANAC46       ----------->GT1<------NtERF2   <---------ZAT14 <----------DOF2  <---------CCA1(2)  ---   agagttgaattgaagaaaggatattagttggtggcttgtaattatcacttcacaatctttctttctttcttcttcttcttcgtatcctatacacagagaa  3619900                       <------MYB46(1)                       <------MYB83                       <---------MYB46(3)                      <---------DEAR3(1)                      --------->MYB111(2)                      <---------AtMYB61                      --------->MYB46(2)                      --------->MYB55(2)                      --------->MYB111(1)                      <---------MYB46(3)                     <--------P                     <---------MYB55(1)                          <---------ZAT2                    <-------GAMYB                                --------->At4g35610                   <---------MYB46(3)             <------ZmHOX2a(1)                   --------->MYB55(2)        <---------TOE2(3)   --------->ZAT2                  <---------AtMYB61         --------->MYB52(1)   <---------At4g35610       <---------             <------MYB46(1)            <------ZmHOX2a(1) ------->TEIL      <---------AHL20(2)            <---------AtMYB61         <---------TOE2(3)<---------YAB1  <----------DOF2     <---------DAG2 ------->DOF2<------MYB83          <---------REM1(1) --------->At4g35610   <---------AHL20(2)   gaaagagagagagattggtggaggttggtgagagaagatgaaggattaacgaggaagatgaatgtcgagctgtcttttttattttgtgacttactttttt  3620000                                                                                             --------                                                                                             <-------                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                         <----------DOF2                    <--------                   ----------->GT1                       <---------DAG2                     <--------            --------------->AGL15                     <-----------GT1                       ---------            <----------DOF2     --------->AtLEC2--------->ANAC55(2)                        <---------ARR11(3)            <---------------AGL15               ----------->GT1                            --------->ARR11(3) -DOF2<----------DOF2 ---------->DOF2           <---------ANAC55(2)             <---------CCA1(2)   tttggtgtctttctctttatgaagtaaagaaaccttgcaaattttgtattatgtaataactttttgtttctatgtgtatatcaaatcttacaagatatct  3620100  Previous    Next  AGI:  At3g11490.1    Description:  rac GTPase activating protein, putative. similar to rac GTPase activating protein, putative [Arabidopsis thaliana] (TAIR:AT5G22400.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67621.1); contains InterPro domain RhoGAP; (InterPro:IPR000198); contains InterPro domain PAK-box/P21-Rho-binding (InterPro:IPR000095); contains InterPro domain Rho GTPase activation protein; (InterPro:IPR008936) Range:  from: 3617529    to: 3619573    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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