Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    <---------WRKY12                                                  <---------WRKY38(1)                                                 --------->DOF5.7(2)                                               <---------MYB46(3)                                          ------>NtERF2                                          <------NtERF2                                         --------->RRTF1(2)                                         --------->RAP2.3(2)                                         --------->RAP2.6(2)                                         --------->DEAR3(1)                                        <------NtERF2                                        --------->RRTF1(1)                                        --------->RAP2.3(1)                                        --------->ATERF1(1)                                       --------->ABI4(1)                                       ------>NtERF2 --------->ANAC46                                      --------->ANAC46                                      --------->RAP2.3(3)                                      --------->ATERF1(2)                                      --------->RAP2.3(2)                                      <---------DEAR3(1)           <---------TOE1(2)                                      --------->DEAR3(1)       --------->HSFB2a(2)                                      <---------ATERF1(2)      ------>ZmHOX2a(1)                                     --------->ERF1<---------DOF5.7(2)                                     --------->ORA47(2)        <---------HSFB2a(2)                 ---------->ID1      --------->RAP2.3(1)   --------->ARR11(3)          <---------CCA1(2)          --------->DEAR4(2)    <---------ARR14(2)       ------>ZmHOX2a(2)             --------->ATERF1(1)   --------->ARR14(2)       ======================HOX2a_HOX2a--------->DEAR4(2) <---------ARR11(3)   ------>ZmHOX2a(1)                <---------RAP2.3(1)   <---------GLK1(1)                <---------GLK1(1) ----------->RAV1(2)  ------>ZmHOX2a(1)<---------ATERF1(1)--------->GLK1(1)<---------At4g35610  -----   ttctcctgatccatctcttgtctcctcttctcatctttcgccgccgcatcggttaacgcgatatcctcgaacgattcagataagaacgattcgatttccg  3554400                                                                                         <---------ZAT18                                                                                        ------>ZmHOX2a(2)                                                                                --------->TGA2(2)                                                                               <-----------TGA1                                                                               <-----------HVH21                                                                              <---------TGA1a                                                                              --------->O2                                                                              --------->TGA1a                                                                              --------->TGA2(1)                                                                              =======================                                                                              <---------O2                                                                              --------->bZIP60(1)                                                                              --------->ANAC58                                                                              --------->ANAC58                                                                              <---------TGA2(1)                                                                              <---------bZIP60(1)                                 ================================HOX2a_HOX2a  --------->bZIP60(2)                                 ====================HOX2a_HOX2a             <------NtERF2             <----------DOF2     ------>ZmHOX2a(2)                          <---------ATERF1(1)             <---------DAG2    <---------ARR11(3)                           ------>NtERF2--------->ZAT18         ------->PIF5          --------->ARR11(3)                          <---------DEAR3(1)         <-------PIF5      <---------ANAC58               ====================================HOX2a_HOX2a         <-------MYC3      <---------ANAC55(2)            =====================================HOX2a_HOX2a         ------->MYC3      --------->ANAC55(2)            <------ZmHOX2a(1)--------->DEAR3(1)         <-------MYC2      <---------ANAC58             <---------TOE1(2)  ----------->HVH21    <----         ------->MYC2   <---------GLK1(2)      <---------TOE1(2)          <------NtERF2<------ZmHOX2a(2) ---->LBD16------->TEIL--------->ATHB12       ------>ZmHOX2a(1)         <---------DEAR3(1)     <-----   agagtttagcacgagccttatcgactgattcgtgatctggtctaggtcctagggttcgaaggatagatcgagtctcggcgacgtcagagatcgcacttgt  3554500                                                                     <---------YAB1                                                               <---------YAB1  --------->MYB55(2)                                                               --------->ICU4  <---------MYB46(3)                                                             --------->YAB1 <---------MYB46(3)                                                     <---------ATHB12--------->ICU4                                                ------>ZmHOX2a(2)  --------->YAB1 <---------MYB46(3)                                               <------ZmHOX2a(2)  --------->ICU4 <--------P                          --------->ANAC55(2) <---------ARR11(3)  <---------YAB1<-------GAMYB ---------->DOF2          <---------ANAC55(2) --------->ARR11(3)--------->YAB1<---------AtMYB61 ===========bZIP_DOF <---------ZAT6<---------At4g35610      <---------YAB1 <---------AtMYB61 -----YAB1           <---------ANAC46    ----------->HVH21  --------->ICU4 --------->ALFIN1 ------HVH21--------->ARR11(3)     --------->At4g35610    --------->YAB1<---------AtMYB61   cattgaagcgagaacatctggttgtgttaagtgaggcatctgagtgacgatctcaatcgatgatgatgatgatgatggtggtggttgttcgatgtcgaag  3554600                                                                                              <------NtERF2                                                                                             ------>NtERF2                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                           --------->RAP2.3(1)                                                                                          --------->At4g35610                                                                                      --------->ARR14(2)                            ----------->HVH21                                       <------MYB83                           <------NtERF2                                            <------MYB46(1)                           --------->At5g28300                                     --------->MYB59                         <---------DEAR3(1)                                        --------->MYB111(1)                   --------->ARR14(2)                                   --------->ICU4<---------ARR14(2)            <------ZmHOX2a(1) ---------->DOF2    --------->ANAC58       --------->GLK1(2) <---------At4g35610         <------ZmHOX2a(1)<---------MYB46(3)     --------->ANAC58 ----------->GT1  --------->MYB52(2)  --------->MYB52(1)     <---------ANAC46   --------->ANAC58  <------ZmHOX2a(1)    --------->MYB46(2)  <---------ARR14(2)     <---------DREB2C(2)--------->ANAC58 ----------->HVH21 <---------ZAT6<------- <------ZmHOX2a(1) <---------ARR14(2)    <-----------------------TaNAC69(2)   <---------TOE1(3)   ggaggaacggaggaggaaggggatttggcggtgaaagaagggagacgagccaagacataagagaggacagggaaattcttagggttaggttctgccgcca  3554700                                                                                      ------->MYC3                                                                                      <-------MYC3                                   <---------HSFB2a(2)                       <---------CCA1(2)                                   --------->HSFB2a(2)                     <---------ANAC58                                --------->GLK1(2)                          <---------ANAC55(1)      <---------MYB52(1)        <---------ARR14(2)                         --------->ANAC55(2) -ATERF1(2)                --------->At4g35610                        <-----------RAV1(1) >ANAC46 <---------TOE1(3)--------->GLK1(2)                    ===================RAV <-------MYC2 >RAP2.3(3)              <---------GLK1(2)                     <-----------RAV1(2)    ------->MYC2 >RAP2.6(2)         --------->CCA1(2)                         ------>ZmHOX2a(2)   <---------REM1(2) >DEAR3(1)         --------->ARR14(2)                    <---------WOX13(1)<---------ANAC58 >ATERF1(2)        <---------ARR14(2)                  --------->ATHB12    <---------ANAC55(2)    <-- >RAP2.3(2)   <---------ANAC46  --------->ARR14(2)    <---------YAB1 *TSS  <---------ANAC46   <------ --RAP2.6(3) <---------LBD16    ------->TEIL          --------->ICU4<----------DOF2<---------ALFIN1 -   ttgttttcgttaagcttcggagatttggaatctgaatctggaaattgatgaagatgatgattgatccaggctttgttgcgtctctccacgttctctgtta  3554800                                       ------->MYC2                                       <-------MYC2                                       ------->MYC3                                       <-------MYC3                                       ------->MYC4                                       <-------MYC4                                      <---------ANAC46                                      <---------O2                                      --------->TGA1a                                      <---------TGA1a                                      --------->O2    <---------At4g35610                                 ----------->HVH21<-----------RAV1(1)                         <---------bZIP60(1)  <---------ANAC58          --------->ICU4      ---------                         --------->bZIP60(1)  <---------ANAC58     --------->YAB1           <-------- -------ZAT6    <---------ARR14(2)    <--------ABF1   --------->At4g35610                  --------->YAB1 ---MYB52(1)    --------->ARR14(2)    <---------ANAC55(2)     ----------->TBP             <---------TOE2(3) ---------------------->TaNAC69(2)    --------->ANAC55(2) <---------ANAC46                <---------YAB1   gtgttcgccttctctgcgttttctctgatgtcaagttgacacgtgtaagcttgtgttgctgagtataaatagtaatgagttatctcttaattaagataat  3554900                                          <----------DOF2                                       <---------ARR11(3)                                       --------->ARR11(3)                                      --------->GLK1(1)                                      <---------CCA1(1)     <----------DOF2                  --------->CCA1(1)     <---------------AGL15            <---------GLK1(1)  <-----------ARR10                   <---------RVE1(1)  <---------ARR11(1)                  --------->RVE1(1)                       <-------GAMYB  <---------ARR11(3)                 --------->ARR11(3)         <---------ZAT14  --------->ARR11(3)                 <---------ARR11(3)     <-----------GT1  ----------->GT1 <---------CCA1(2)                 <---------TOE2(3)    <---------YAB1--------->AHL20(2) >ARR11(3)                    ----------->GT1       --------->ANAC55(2)     --------->MYB59     ----- -ARR11(3)                    <---------ZAT6      <-----------GT1   <----------DOF2 --------->YAB1   ttcatatcttttctgagtaaatctacaatatacagttaagatatctttttttttacttaatattacttcactttaaattcggttaaacataaaccatgta  3555000                                                                           <---------AHL20(2)                                                                          --------->ICU4                                                                          <---------YAB1                                                                        --------->YAB1                                                                       <---------YAB1                                                                      --------->AHL20(2)                                                                      <---------AHL20(1)                                                                      <---------AHL20(2)                                                                      --------->AHL20(1)                                                                 --------->LBD16                                                                <---------ANAC55(1)                                                                --------->ANAC55(2)                                                                <---------ANAC58                                                                <---------ANAC58                                                                <---------ANAC46                                                                <---------ANAC55(2)     --------->AHL20(2)                                                               <---------LBD16       <---------AHL20(2)                                                             <-----------GT1   <---------AHL20(2)                                                          <---------AHL20(2)   --------->AHL20(2)  <-                                                         <---------AHL20(2)--------->AHL20(2)      <-                                                         --------->AHL20(1)--------->ATHB51      <---                                                         --------->AHL20(2)<--------ATHB1        <---                 <---------TOE2(3)                       <---------AHL20(1)<---------ICU4 <----------              --------->AHL20(2)                   --------->ANAC58  --------->YAB1 <---------AHL20(2) -->TEIL      <---------AHL20(2)                   --------->ANAC58 <---------YAB1  --------->AHL20(2)   ttttttatcttgaaattttaatgtaaactaaattttaaaaaaacttttgaagtaagaaatttatttccgtattataataatttaaattaaataaacaatt  3555100                                                <---------ICU4                                               <---------YAB1                                             <-----------GT1                                           <---------AHL20(2)                          <---------ARR14(2)<---------AHL20(2)                                     <-         --------->AHL20(2)   --------->ZAT2--------->AHL20(2)                                    ---  ----------->GT1         --------->ARR14(2)--------->AHL20(1)                                    --- --------ANAC58          <---------GLK1(1) --------->AHL20(2)                                -------- --------ANAC58     --------->DAG2     <---------AHL20(2)                                    -------- --------GT1       ---------->DOF2    --------->AHL20(2)                        <---------AHL20(2)<-- ------AHL20(2)<---------TOE2(3)      <---------AHL20(2)                 ---------->DOF2    <-------- -GT1    <---------AHL20(2)   --------->At4g35610     ------>ZmHOX2a(1)<---------YAB1     --------->WOX13(1)   tacttggttaaatatttaagaaaaagcatatcagcttgattttaattttattattcctatatcaaaaaaactcatgaaagaatttatgagttcaatcaaa  3555200                                      <---------ICU4                                      -------->HAHB4                                      <--------ATHB1                                   --------->YAB1                                  <---------AHL20(2)                                       --------->At4g35610  --------->ICU4                 <---------AHL20(2)                             <---------TOE2(3) --------AHL20(2)          <----------DOF2                                     --------->YAB1 ------>AHL20(1)     --------->ARR14(2)           <-----------GT1              <---------ICU4 ------>AHL20(2)     --------->ZAT14  --------->YAB1                        --------->YAB1 <---------At4g35610 ->YAB1              <---------ARR14(2)        <---------ICU4              <---------AHL20(2) ->AHL20(2)          <---------ZAT18 <---------ATHB51                      --------->AHL20(2)     --- -------AHL20(2)     <---------ZAT14 --------->ICU4                   <---------YAB1  <-----------GT1 -ATHB12       --------->YAB1    --------->AHL20(2)      <----------DOF2  --------->AHL20(2)    -----   tttaatgagtagacaaataatagtatactcttttttttaataattctgaaaattacagacttttaatctattcttatttaataatgtttttccatctgaa  3555300  Previous    Next  AGI:  At3g11330.1    Description:  leucine-rich repeat family protein. similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT5G05850.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64249.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, typical subtype (InterPro:IPR003591) Range:  from: 3551980    to: 3554769    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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