Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             --------->DEAR3(2)  <-----------GT1                                                                       <---------SPL7 --------->AHL20(2)                                                                     <---------SPL1(2) ------>AHL20(1)                                                                   --------->ZAT2 ------>AHL20(2)                                                                   --------->At4g35610 -------AHL20(2)                                        ----------->HVH21          <---------ZAT2 ----->AHL20(2)                                       ----------->GT1              <---------At4g35610 ------AHL20(2)                            <---------ANAC55(2)                 <-----------HVH21    - ------ATHB51                              <---------ANAC46                <-----------GT1--------->SPL7 ------ATHB12                              --------->ANAC55(2)--------->MYB52(1)<-------TEIL   ------   taatttactaacacggttcaaaatagacttgtccatattggtttcacgtataaaaccggtgacaaaaccgagtttattcacgttcagctccgtaccgatg  3551300                                                                                                    -                                                                        <----------DOF2             -                                                                   <---------ALFIN1                 -                                                                  --------->ANAC58                  -                                        --------->YAB1            --------->ANAC58                <--                                        --------->TOE1(3)   ----------->HVH21                     <--                                  ------>ZmHOX2a(2)        <-----------HVH21                   ------                                 --------->GLK1(1)         <-----------TGA1          --------->ZAT2 <                          ------>NtERF2 --------->TOE2(3) --------->ANAC46           <---------ZAT2 <        <----------DOF2  <---------RAP2.6(2)              --------->O2  ============================= -------->ICU4           --------->ETT(2)       --------->LBD16   --------->ANAC46   <---------At4g35610 ----->HVH21  <---------GLK1(2) <---------ARR11(3)        --------->bZIP60(2)        --------->At4g35610   acattatcggctctaagatgctccttggcgacctgatctctaccataacccgaggcatccccgtcaccacgacccttttcttacacgagctgaaaaccct  3551400          <---------ANAC58          <---------ANAC58        --------->AtLEC2 <-------PIF5 --------->TGA2(1) <-------MYC2 <---------TGA2(1) ------->MYC4 --------->bZIP60(1) <-------MYC4 <---------ANAC55(2) ------->PIF5 --------->ANAC58 ------->MYC2 --------->ANAC58            <---------DEAR3(2)                        ------->GAMYB <-------MYC3 --------->ANAC46            --------->HSFC1(2)                       <------------AtMYB77 ------->MYC3 <---------bZIP60(1)         <---------HSFB2a(1)                      --------->MYB46(3) -------->O2 --------->SPL7 <---------ARR11(3)    --------->MYB46(3)              ------>MYB83 -------->ANAC46--------->TGA2(2)         --------->HSFB2a(1)                     -------->P -------->ANAC55(2)         --------->ARR11(3) >>>>>>>ZML2                        ------>MYB46(1) -------->TGA1a<-----------HVH21          <---------HSFC1(2)                     --------->MYB52(1) ----------OsbHLH66     --------->REM1(2)<---------DEAR3(1)                     --------->MYB46(3) -------ALFIN1--------->ANAC55(2)       --------->RAP2.6(3)               ---------->DOF2          -- --->ANAC46  <-----------STF1          ===============================HOX2a_HOX2a--------->MYB55(1)<- ---------O2<---------TGA2(2)         ----------->HVH21              ------>ZmHOX2a(1)       -------- ---------TGA1a<-----------TGA1       <---------SPL7           =============HOX2a_HOX2a     <-------- =========bZIP_DOF     --------->AtLEC2<------ZmHOX2a(1)       ------>ZmHOX2a(2)--------->AtMYB61----   ccacgtgtccatgcttacgtcatccatgtagaacttcggcaggacggttctagccactgcttcgatctctccttcgcaaagaccaaccgtggctatgaaa  3551500                                   <-----------HVH21                            --------->LBD16                                                         <                          <---------LBD16                                                         <--            <---------ZAT14<---------ANAC46                                --------->At5g28300   <---            <---------ZAT2<---------At4g35610  <------MYB46(1)            ----------->GT1        <--- ------->YAB1             --------->At4g35610  <------MYB83              <---------ANAC46        <--- --------ICU4         <---------REM1(1)       --------->MYB111(2)      --------->MYB52(1)       <---- ->YAB1     --------->At4g35610   --------->ANAC58                    ----------->TGA1        ------- -YAB1      <---------At4g35610   --------->ANAC58        ----------->GT1<---------DEAR3(1)  -------- ----->ARR11(3)    <---------MYB46(3)         --------->MYB46(2)      ----------->HVH21    <---------   atcatgagcttgagagcagcgttgttgtagcggagaacgtcaaggagtttggtgatgggccagtgaaacagcatgacggtgaaacgaattagaccagatg  3551600        --------->ANAC58 ---------->DOF2 ---------WRKY12 ---------HVH21 ------ANAC58 ------ANAC46 ------ANAC58                                                                        <---------YAB1 ---TEIL--------->ANAC58                                               <------------CBF -->ARR14(2)                                                          --------->ATHB12     <---------YAB1 ->At4g35610   --------->ANAC58          <-----------GT1   ------>NtERF2       ------------>CBF --RAV1(2)     --------->ANAC58------->TEIL             <---------ATERF1(1)    <------ZmHOX2a(2)   cgtcaaaggcaaggagcacgaagtaagagaatgaatccttgtttttcagtatataagccgaggccatcttcttcattgtggatcaatttgattatgcttc  3551700                                    <------------CBF                             <---------ANAC46                             <------MYB46(1)                                 --------->YAB1                             <------MYB83                                   <---------YAB1                            --------->MYB46(2)                     <---------ATHB12                            --------->MYB59                      --------->WOX13(1)                            --------->MYB111(1)                ------------>CBF                <----------ID1 --------->ALFIN1               --------->ANAC58         <-------------       <---------ICU4  <---------AHL20(2)                ---------->DOF2    --------->ICU4<---------MYB52(1)      --------->ICU4   --------->AHL20(2)   ---------->DOF2   --------->ANAC58  ---------->DOF2   ---   tctctgtaatctttgttagagacaaaaaattaggtgggaattgaatgaaagcttaagagtaaagaagcaatcagtgtgatgataaagactacgttgtttc  3551800                                                                                              -------                                                                                              <------                                                                                            <--------                                                                                            ------>NtERF2                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                           <---------DEAR3(1)                                                                                           <---------ATERF1(2)                                                                                           --------->ATERF1(2)                                                                                      ----------->RAV1(2)                                                                                      --------->ATERF1(1)                                                                         <------------CBF  <---------ANAC46                                                              --------->ARR14(2)     ------>NtERF2                                               ------>ZmHOX2a(2)       <---------ARR11(3)  <---------RAP2.3(3)                                              <------ZmHOX2a(2)        <---------AHL20(2)  <---------RRTF1(3)                                             <---------ARR14(3)        --------->AHL20(2)  <---------RRTF1(2)                                             --------->ARR11(3)        --------->AHL20(1)  <---------RAP2.3(2)                                             <---------ARR11(3)        --------->ARR11(3)  <---------RAP2.6(2)                                             --------->ARR14(3)        <---------AHL20(1) <---------ABI4(1)                                             --------->AGP1   <---------ARR11(3)    <---------ARR14(2)                    <---------WOX13(1)       --------->ARR14(2)       --------->AHL20(2) <---------ATERF1(1)                    <--------P               <---------AGP1   --------->ARR11(3)    --------->ARR14(2)            ------------>CBF                 <---------ARR14(2) ------>ZmHOX2a(2) --------->LBD16          <-------MYC3                     ----------->ARR10  <---------ARR14(2) --------->HSFB2a(2)          ------->MYC2             ==================================================================          <-------MYC2        --------->ALFIN1--------->CCA1(2)<------ZmHOX2a(2) <---------HSFB2a(2)          ------->MYC3      --------->ALFIN1 <-----------ARR10<---------AGP1    <---------LBD16 --------WRI1     <---------MYB46(3)  ---------->DOF2    --------->TOE2(2)   <---------ANAC58-------- ------->DOF2  <------------CBF    ----------------->AGL3--------->TOE1(2)   <---------ANAC58<------NtERF2   caaagagaagcatatgcaattggttgataagtgtggaaccaaaagaagatctgcataaaccaaggatctaaaatatattgcttccggagcctggcggcgt  3551900        <---------AHL20(2)                                                  <---------ANAC46   <---------TOE2(3)                                                        ----------->GT1 ---->GT1                                                               --------->DAG2 ---ANAC46                                                             ---------->DOF2           ---- -ERF1 --------->AHL20(2)          --------->YAB1                   --------->TOE2(3)         <------ -RRTF1(1)  --------->YAB1      ===================================================================== -ORA47(2)<---------TOE2(3)     --------------->AGL15               --------->TOE1(3)  --------->YAB1 -RAP2.3(1)--------->ICU4       <---------------AGL15               --------->YAB1     <---------ICU4 ===============================================MADS_MADS        <-----------GT1      <---------ATHB12 ->RAP2.3(1)-------->HAHB4   <-----------GT1                   <---------KAN4(2)    --------->WOX13(1)   aatttgagatttaatgatcaacatttgttttttactaaaataagtatatagtaagtgattcttcgaataaccataaagtcgtgaaacaatcatgttcttt  3552000                                      <---------------AGL15                                      --------------->AGL15                                     ================================================================                               <---------TOE2(3)                          --------->REM1(1)                          --------->ZAT6      ----------->GT1                        ==============================MADS_MADS                        <---------------AGL15 <---------ANAC55(2)                    --------->GLK1(2)----------------->AGL3 <----------DOF2   <---------GLK1(2) ----------------->AGL2    <---------ALFIN1           ----------- ------>ID1  <---------ANAC55(2) <------ZmHOX2a(1)--------->DAG2    ----------->GT1      <---------TOE2(3) ----DOF2 <---------YAB1------>ZmHOX2a(1)    --------->MYB59 --------->AtMYB61           <---------TOE1(3) =======================================MADS_MADS---------->DOF2 --------->ANAC46--------->YAB1   tcgcttatagttatcatgtaagattcctacactaaggaaaccaaaaataggtaaagtccaaaaccacacccagtaaaatccaagaagaattgaggttaaa  3552100                                                                                           ----------                                  --------->LBD16             --------->TOE2(3)       <-----------HVH21                                  <-----------HVH21           --------->TOE1(2)      --------->ANAC46                <---------------AGL15                         --------->TOE2(2)   -------->P --------->AHL20(2)              --------->O2                 <---------MYB59   <---------SPL7 ===============================MADS_MADS       <---------TOE2(3)           --------->ANAC58        - >GT1           --------------->AGL15      <----------DOF2  ------->TEIL    --------->ANAC58   ------   caaataactaagtgttttctcttattagttggaccccgtgagagtcttttaagtttgaattgaacctaagttaatgacaggccttacccgtcagaaagaa  3552200  Previous    Next  AGI:  At3g11325.1    Description:  acyltransferase. similar to ATGPAT5/GPAT5 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 5), 1-acylglycerol-3-phosphate O-acyltransferase/ acyltransferase/ organic anion transmembrane transporter [Arabidopsis thaliana] (TAIR:AT3G11430.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70320.1); contains InterPro domain Phospholipid/glycerol acyltransferase; (InterPro:IPR002123) Range:  from: 3549999    to: 3551667    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g11330.1    Description:  leucine-rich repeat family protein. similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT5G05850.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64249.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Leucine-rich repeat, typical subtype (InterPro:IPR003591) Range:  from: 3551980    to: 3554769    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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