Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   --------->ANAC58        <xxxxxxxxxxx                                                          <---------ANAC55(2)            <xxxxxxxxxxx                                                          <---------ANAC46              <xxxxxxxxxxxx                                                          <---------ANAC58    <---------ANAC58                         <---------YAB1                   <---------ANAC58    --------->ALFIN1                        --------->KAN4(2)                 --------->ANAC55(2) <---------ANAC58   <---               <----------DOF2  --------->YAB1    --------->ANAC58      <---------AHL20(2)       ---- --------->AtSPL8      <---------KAN4(1)      --------->YAB1     --------->ANAC46 <---------ANAC58 ----------AtSPL3     <---------YAB1          ----------->GT1    --------->ANAC58 <---------ANAC58 ----------AtSPL8  <---------YAB1 ----------->GT1 --------->ANAC58    xxxxxxxxxxxxxxxx>smallRNA(i)---   gtacattaccaccaaggctttctgattattcttatcatgttatatgaatagtaagaaattacgtagaacgcaatttaagtgtgtgcgagtcaccacaaat  3527200                                                                         --------->CCA1(2)                                                                 ------->TEIL                                                            <---------ANAC46   --------->AHL20(2)                                                            <---------ANAC58   <---------AHL20(2)                                                    --------->ANAC58     <------ZmHOX2a(2)  xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                --------->ANAC46    <---------ARR11(3) xxxxxxxxxxxxsmallRNA(si3)                          --------->ANAC58    --------->ARR14(2) xxxxxxxxxxxxsmallRNA(le3)             <-----------GT1      <---------ANAC58   --------->YAB1    ---- xxxxxxxxxxxsmallRNA(si3)      --------->ARR14(2) <---------AtLEC2      <---------ARR14(2)       ---- ------AHL20(2)                <---------ARR14(2) <---------ANAC58      --------->AGP1    --------->ARR11(3) ----->AHL20(2)              <---------MYB46(3)   <---------ANAC58     --------->GLK1(1)  <---------AHL20(1) ------->DOF2               <---------TOE1(2)   <---------YAB1<---------YAB1  <---------ATHB12   ----   taaaggagaacaaattcaatgtttcaatcgctggttccgatatacaacttatgcatgccatggcatgaatgcgagatccaattatatactaatatataca  3527300                                                                           <------ZmHOX2a(2)                                                                          <---------ARR11(3)                                                                          --------->ARR11(3)                                                                        --------->ICU4                                                 ---------->DOF2      ---------->DOF2           --------->AHL20(2)                 ====================================HOX2a_HOX2a         ----------->GT1                      <------ZmHOX2a(1) <---------ARR14(2)                  < ----->ANAC58                                 =====================HOX2a_HOX2a               -------- ----->ANAC46                           <------MYB46(1)         --------->ARR14(2)       <---------ARR14(2) ----->ANAC58                           <------MYB83        <------ZmHOX2a(2)            --------->ARR14(2)   cacaaaaacatatgtaaatatagatggaacagaagcctagataggttaggataaagaaaacgatcaaatctgcaaagatcagtctctcccaaatccccaa  3527400                                              --------->ANAC55(1)                                              <---------ANAC55(2)                 <---------ANAC58             --------->ANAC55(2)                 <---------ANAC55(2)          --------->ANAC46                 <---------ANAC46        <----------ID1               ------>NtERF2                 --------->ANAC55(2)     --------->ANAC58            <---------ETT(1)                 <---------ANAC58        --------->ANAC46            --------->ANAC46    ---------->DOF2     <-----------GT1  --------->ANAC58            ----------->HVH21 ----------ID1   ----------->GT1  --------->YAB1                     --------->LBD16             <--- ->LBD16     ------->TEIL        <---------YAB1                   ------>ZmHOX2a(1)          <-------   aaaaaacaaagcatgcatttcgtaataaacaactcatcataaaacgacacataactcgaaaacctctcctcccgacatttcatcaattcatttctctttt  3527500                                       <<<<<<<<<ARR2                                       <<<<<<<<<ARR1                                <---------YAB1                              --------->YAB1                             <---------YAB1                           --------->YAB1                           <---------ICU4                           -------->ATHB1                          <---------ATHB51                          <---------AHL20(2)                          --------->ICU4--------->YAB1                          --------->AHL20(2)     ----------->TBP                 *TSS                       <---------AHL20(1)        <---------AHL20(2)           --------->TOE2(3)                       --------->AHL20(2)      ----------->TBP               ----------->GT1      ---------->DOF2  --------->AHL20(1)    --------------->AGL15 --------->ANAC58            <----- ------AHL20(2)  --------->TOE2(3) ------------>CBF   ----------->GT1        <---------ANAC55(2) ---DOF2--------->ICU4 <---------AHL20(2) <-----------GT1          --------->ANAC58         <------ZmHOX2a(1)   tattttcgaaaagatgaaaacttaataaattattatgaacaatcttactatatatatggatatatacacaggccctaaaacgtaaaacagttgaggactt  3527600                                               --------->YAB1                                            ----------->RAV1(1)                                      <---------ANAC58                                      <---------bZIP60(2)                                      --------->TGA1a                                      =======================MYC_MYB                                      --------->O2                                      <---------O2--------->MYB52(1)                                      <---------TGA1a                                      --------->ANAC55(2)                                 <---------At4g35610                                 <---------HSFC1(2)                      <---------ANAC58                                 --------->HSFC1(2)                      <---------ANAC46                       =========================bZIP_DOF                 <---------ANAC58                       ---------->DOF2<---------ANAC55(2)               <---------LBD16                   <---------ANAC46   <---------ANAC46          ------>NtERF2                  <---------LBD16--------->At4g35610 ------->GAMYB     --------->ALFIN1             -             ===================================bZIP_DOF  --------->ARR14(2)                     <--- --------->At4g35610 ----------->HVH21<---------ANAC58    --------->MYB52(1)                 -------- <---------At4g35610--------->LBD16   <---------ANAC55(1) <---------ARR14(2)            --------->MYB52(1) -----DOF2   <----------DOF2<---------------------WRI1   <------ZmHOX2a(1)--------->LBD16  ------->GAMYB   tacatctgaacatgtctttctccgtgaaaggtcgaagcttacgtggcaacaataacggaggaacggggacgaagtgcgggagatggaatccaacggtgga  3527700                                                                              <---------ZAT2                                                                              --------->At4g35610                                                                              --------->GLK1(1)                                                                          --------->ANAC46                                                                     ------>ZmHOX2a(2)                                                                    <------ZmHOX2a(2)                                                                    --------->GLK1(1)                                                                   <---------AGP1                                                                   --------->ARR14(3)                                                                   <-----------ARR10                                                                   <---------ARR14(3)       <---------ARR11(3)                                          <---------ARR11(3)       <---------ARR14(3)                                      <---------At4g35610       --------->ARR14(2)                                   <-------TEIL <---------LBD16       <---------ARR14(2)                                 <---------ARR14(2)  --------->ZAT2       --------->ARR11(3)<---------ANAC58                 <---------GLK1(2)   <---------GLK1(1)------       --------->ARR14(3)<---------ANAC58                 --------->ARR14(2)  <---------At4g35610 --- -------->At4g35610------>ZmHOX2a(2)           --------->MYB46(3)  --------->ARR14(2)          ------ ------At4g35610<---------ZAT14                <---------MYB55(2)  <---------ARR14(2)     --------->ANAC46 ->ALFIN1     <---------WOX13(1)             ----------->RAV1(1)   --------->ARR11(3)    <---------LBD16   gcagttgaagatattgactgatctgtttcgagccggtcttagaactccaacaactgatcagattcagaagatctctacggagctcagtttctacggcaag  3527800                                                                                                    -                                                                                             <-------                                                                                             --------                                                                                            <--------                                                                                          <---------ICU4                                                                                          --------->YAB1                                                                  <---------ARR11(3)     <---------YAB1                                                                  --------->ARR11(3)   --------->YAB1                                                            <---------ANAC46           <---------ICU4                                                            ----------->GT1           <---------YAB1- --->ANAC58                                             <---------HSFC1(2)          <---------ICU4 -- ------>CCA1(2)                      --------->DAG2   --------->ARR14(2)            --------->YAB1--- --->ANAC58                      --------->YAB1       <---------ARR14(2)        <---------YAB1  -----   atagagagcaagaatgttttctattggtttcagaatcataaggctagggagaggcagaaacgtcgtaaaatctccattgattttgatcatcatcatcatc  3527900                                          <---------AHL20(2)                                          --------->AHL20(2)                                        <---------AHL20(2)                                      --------->AHL20(2)--------->AHL20(2)                                      <---------AHL20(2)<---------AHL20(2)                                    --------->AHL20(2)  --------->YAB1                                  --------->AHL20(2) --------->YAB1                                  <---------AHL20(2)<---------YAB1                                --------->AHL20(2)  --------->AHL20(2)                                <---------AHL20(2)  <---------AHL20(2)                         <----- ------>GAMYB                 <---------AHL20(2)--------->AHL20(2)--------->ATHB51         <---------AHL20(2) --ICU4                       --------->AHL20(2)<---------AHL20(2)<---------ICU4          <---------ARR11(3) ->YAB1                     <---------AHL20(2)<---------AHL20(2)  --------->ATHB12        <---------AHL20(1) -YAB1                      --------->AHL20(2)--------->AHL20(2) <---------YAB1           --------->AHL20(1) -------->YAB1            --------->AHL20(2)--------->AHL20(2)   --------->ICU4     <-----------GT1 ------->MYB46(3)     --------->AHL20(2)--------->AHL20(2)     --------->YAB1   <---------ARR11(3) ----->P  <---------ZAT6  <---------AHL20(2)<---------AHL20(2)<---------YAB1    --------->ARR11(3) -- ---->MYB46(3)      <----------DOF2 <---------AHL20(2) <---------YAB1          --------->YAB1 -------   aaccatcaactagaggtagtctctttatatatatatatatatatatatatatatataattatatatcattattgttttatatgatatttctatatattta  3528000          ----------->GT1        <---------ANAC46                                                                           --   --------->YAB1                                                                          ---------- ----AHL20(2)                                                                              --------->LBD16 --------->GT1  --------->YAB1                          <------ZmHOX2a(1)                <---------LBD16 -->AHL20(2)   <---------YAB1                <---------GLK1(2) --------->DAG2         <----------DOF2   atggataatagtgtgttattatagatgtttttgaaataagcgaagaagattgtcaagaggaagagaaggtgatagagacattacaactctttccggtgaa  3528100  Previous    Next  AGI:  At3g11260.1    Description:  WOX5 (WUSCHEL-related homeobox 5); transcription factor. Identical to WUSCHEL-related homeobox 5 (WOX5) [Arabidopsis Thaliana] (GB:Q8H1D2;GB:Q9C775); similar to homeobox-leucine zipper transcription factor family protein [Arabidopsis thaliana] (TAIR:AT5G05770.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69022.1); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Homeobox; (InterPro:IPR001356) Range:  from: 3527581    to: 3528439    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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