Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                --------->ZAT2                                                              <---------At4g35610                                                              <---------ZAT2                                                              --------->At4g35610                                                              ----------->RAV1(2)                                                             ------->TEIL                                                          <---------ANAC55(2)                                                          --------->ANAC58                                                          --------->ANAC58                                                          --------->ANAC55(2)                                                          --------->ANAC46         <---------ATHB12                             <-----------HVH21         <XXXXXXXXXXXXXXXXXXXXMIR417                 ------->GAMYB    --------->ANAC46 <----------DOF2                <------------AtMYB77                        ----- ->ZmHOX2a(1)  <-----------GT1                   --------->MYB46(3)               <---------MYB52(2)   ctatacccacaatgaattcactactttctattcattcagacatttcatcgaacaactgtcacgcagctgaaactaaaatcgtcgactaacaatatagcta  3516200                                                                                                    -                                             --------->ANAC46                                       <         --------->ATHB12                <-----------GT1                                         ----   --------->YAB1                     <---------ICU4             ---------->DOF2                 <---  <-------TEIL                 --------->WOX13(1)           --------->MYB52(1)            <----------DOF2 ----->DOF2     --------->GLK1(1) --------->AHL20(2)     --------->ANAC46     ---------->DOF2   <----   aagattcatattgatgggaaacctagaggctataaatcaaatattaccagctattttctaagtaacagaaagagaaaactcaaaggcttcgtctttgcta  3516300                                                                         <---------MYB52(2)                                                                    ------>NtERF2                                                                    <---------ATERF1(1)                                                                   <---------DEAR3(1)                                                               --------->ATERF1(1)                                                             <---------ANAC58                                                             <---------ANAC58 ------>MYC3                                                ---------->ID1 -------MYC3                        --------->HSFB2a(2) <----------DOF2------>NtERF2 ----->REM1(1)              --------->GLK1(2)         <----------DOF2 --------->DEAR3(1) ------ALFIN1              <---------GLK1(2)     <---------At4g35610--------->LBD16                 - -----REM1(2)             <------ZmHOX2a(1)    <-----------RAV1(2)<---------LBD16      --------->At4g35610   cacgtttgtgaagatggtctcagaagtaggaatcttttctcgcaccaattcaggtgctctttgtcgtctccggcgactaacttggacgaagcagaaggaa  3516400                                                                                                    -                                                                                                   <-               <---------DAG2                                                                      <-              *TSS                                                                                 <-              <---------ANAC58                                           --------->YAB1            <-              <---------ANAC58               <---------HSFB2a(2)         --------->ANAC55(2)       --            <-----------GT1                  --------->HSFB2a(2)        ---------->ID1             <-     --------->DAG2                    <---------ANAC58            <---------GLK1(2)              <--   ---------->DOF2     ------------>CBF<---------ANAC58            <---------ARR11(3)   <---------AHL20(2) -------->LBD16<----------DOF2   --------->GLK1(2)----------->GT1  --------->ARR11(3)   --------->AHL20(2)   cccagaaaaggtttttgctttttagtccaatagagactcttgctcgtctagagggtttaatatgcaaaagatttttcgtaattcgcataaaaaattaagt  3516500    --------->KAN4(2)                  --------->ANAC46   <----------TaMYB80                  --------->bZIP60(2)   <---------KAN4(1)                   --------->ANAC58  <---------ARR14(2)                 <---------ALFIN1  ---------->TaMYB80                <-------TEIL  ----------->GT1  --------->ARR14(2)                <---------WRKY12 <---------CCA1(2)                  <---------WRKY38(1) -------->LBD16                  <---------At4g35610 --------ANAC58                  --------->At4g35610 --------ANAC55(1)              --------->MYB59  --------->ANAC46                                  <- --------ANAC46              <-----------HVH21   --------->ANAC58     <----------DOF2              <- --------ANAC55(2)        ----------------------->TaNAC69(2)   --------->ALFIN1     --------->ARR11(3) ------->ANAC55(2)      <---------DAG2 --------->O2         <---------TOE2(3)      *TSS--------->TOE2(3) --------ANAC58         <----------DOF2--------->ANAC58   ---------->DOF2 <---------YAB1  ---------->DOF2 ---------------------TaNAC69(2)>>>>>>>GRF7      --------->ANAC58  <------ZmHOX2a(1)<---------ARR11(3)   tccgtatattccaaggccatccatgactttttgtcaggtccacgttactacaaggaaaaataaaggtgaggactttatttttgtaatatcgtcaaagaac  3516600                                                                                          ------>ZmHOX2a(2)                                                                                       --------->YAB1                                                                                       -------->HAHB4                                                                                      --------->ICU4                                                                                      <---------YAB1                                                                                     <---------TOE2(3)                                                                                   <---------AHL20(2)                                                                                   --------->AHL20(2)                                                               ------>ZmHOX2a(1)  --------->ICU4                                                               ==================================HOX2a_HOX2a                       <---------TOE2(3)                      <---------MYB59     <---------YAB1                       <---------TOE1(3)                   --------->ARR14(2)<---------ANAC58           <-----------GT1        <----------DOF2          <---------ARR11(3)<---------ANAC46     <---------YAB1   ---------->DOF2                      --------->GLK1(2) <---------ANAC58 ---------DOF2      <---------AHL20(2)                     <---------ARR14(2)<---------ANAC55(2) --------DAG2<-----------GT1      <---------DAG2    --------->At4g35610      --------->ANAC55(2)   <-   actttatatgatttttctctattttaaagtttcttcctttttcatctaaaaatcggcagaaaatcctaactccagtcttgcgtaattaatgatcgtcttc  3516700                                                                     --------->LBD16                                                                    <---------HSFB2a(2)                                                                    --------->HSFB2a(2)                                              <---------AHL20(2)   <---------LBD16                     <---------AHL20(2)--------->CCA1(2)         --------->GLK1(2)                   <---------YAB1     <---------ARR11(3)        <---------GLK1(2)                --------->AHL20(2)    --------->ARR11(1)<----------DOF2                <---------AHL20(2)---------->DOF2<------------------------ANAC81         <---------ALFIN1      <---------At4g35610     <---------ANAC58              --------->ALFIN1 ---------DOF2<----------DOF2  --------->At4g35610     <---------ANAC58            --------->CCA1(2)   ccttttatcacacactcttttattattttgctcagcaaaagatttgattttttttttgcttttatagattctgggaatagtttagagatggggagattgt  3516800                                                                              <---------TOE1(3)                                                                      <---------ANAC58                                                                      <---------ANAC58      <--------                  --------->ANAC58              ------>MYB46(1)    --------->bZIP60(1)      ---------                  --------->ANAC58              ------>MYB83    --------->ICU4<---------TOE2(3)    --              --------->ANAC58   --------->ANAC58             --------->YAB1  <---------TOE1(2)  <---              --------->ANAC58   --------->ANAC58<---------ATHB12  <---------bZIP60(1)------->TEIL --   tcttggtgaatttggaaggcaagtcttacagttgtaagcactgcaagaccaatcttgctctctgtgatgatgtcgtctctaaggtttgaatctgagctaa  3516900                                            <---------YAB1                                          --------->YAB1                                       <---------CCA1(2)                                    <---------YAB1                                   <---------ARR11(3)                                   --------->ARR11(3)                >>>>>>>>>ARR1                                  --------->YAB1                     >>>>>>>>>ARR2                                 <---------YAB1                      >>>>>>>>>ARR1 -At4g35610                    --------->YAB1--------->ATHB12        >>>>>>>>>ARR2 >At4g35610--------->ATHB12    <---------At4g35610                  <------ZmHOX2a(1) ------->YAB1               <---------At4g35610                    <---------YAB1                   - ------ARR11(3)             ------>ZmHOX2a(1)<---------ICU4   --------->ZAT6                        < ------->TOE2(3)      <-----------GT1--------->YAB1       <----------DOF2                 --------->AHL20(2)   atcttaatttgggttattgggatttatctcctctgatgatcatatcatcatttggggtctcttttcactaggattgtgttttgaaaattgcataaattag  3517000                                              --------->GLK1(2)                                              --------->ARR14(2)                                              <---------ARR14(2)                                          --------->HSFB2a(2)           <---------WOX13(1)            <---------LBD16                <---------ICU4          <---------ANAC58             --------->ARR11(3)               --------->YAB1          <---------ANAC58             <---------ARR14(2)              <---------ATHB12         --------->ATHB12             <---------GLK1(1)              --------->YAB1        <---------AHL20(2)            --------->GLK1(1) <---------YAB1 --------->ICU4        <---------YAB1      <---------DAG2<---------HSFB2a(2)     --------->TOE2(3)    ---------->DOF2  ------>ZmHOX2a(2)         <----------DOF2  <---------GLK1(2)  <-------TEIL   ----------->GT1 -------->ARR11(3)   --------->YAB1<---------YAB1      --------->ARR11(3) <---------YAB1 ---------ARR11(3) <---------ARR11(3)<---------ARR11(3)<---------ARR11(3) --------->ICU4--------->DAG2   atgatctaatttgattgccaaaatcatatactttttgatgatatctggaatctggatgatcatggatacattaatcatgatcagttaaaaaaaggagcta  3517100  Previous    Next  AGI:  At3g11220.1    Description:  ELO1 (ELONGATA 1). similar to unnamed protein product [Vitis vinifera] (GB:CAO23066.1); contains InterPro domain PAXNEB (InterPro:IPR008728) Range:  from: 3513537    to: 3516414    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g11230.1    Description:  yippee family protein. Identical to Protein yippee-like At3g11230 [Arabidopsis Thaliana] (GB:Q9C777;GB:Q8L918); similar to yippee family protein [Arabidopsis thaliana] (TAIR:AT2G40110.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41344.1); contains InterPro domain Yippee-like protein (InterPro:IPR004910) Range:  from: 3516583    to: 3518391    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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