Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     <---------AHL20(2)              --------->YAB1                                       --------->AHL20(2)              ----------->GT1                                     --------->AHL20(2)             <<<<<<<<<ARR2                                      --------->YAB1             <<<<<<<<<ARR1                                    --------->AHL20(2)    --------->ANAC58                                     ----------->GT1    --------->ANAC58           ------->TEIL             ----------->GT1             --------->YAB1    --------->ANAC46   ---------->DOF2<---------ATHB12 --------->MYB59        ----------->GT1   <----   taatacacgcttacaatcgtaaaacaaaagacgaatttcaatgaacaaatgtatagttagggaaaataataaataatacagagtaattagaataagcgat  3512700                                                        ----------->RAV1(1)                    <-----                                              <---------ARR14(2)                               <-----                                              --------->ARR14(2)                  ----------->TGA1                                       ------->TEIL  --------->ANAC58             ----------->HVH21                                <---------TOE2(3)    --------->ANAC58           <---------At4g35610                              --------->TOE2(2)      --------->ANAC46          --------->GLK1(2)    --------->HSFB2a(2)       --------->TOE1(2)  --------->HSFB2a(2)           ------->TEIL <-------- --ZmHOX2a(2) ------->GAMYB  --------->MYB46(3)  <---------HSFB2a(2)    <---------WOX13(1) <---------DAG2   ctacttgtagaatcaacgctctagtaatctaaccaaggatgaatatcgaatccagaagccacagagagagagagattgatgaatctgacgataccttacg  3512800                                                                                            <--------                                                                                            ---------                                                                                        <---------LBD16                             --------->AtMYB61                                          --------->LBD16                             ------->GAMYB                                             <---------ANAC46                            --------->MYB46(3)                                        ------>NtERF2                            <---------MYB111(2)                                       <---------LBD16                            <---------MYB55(2)                                        --------->ATERF1(1)                           -------->P                                         ------>ZmHOX2a(2)                           ------>MYB46(1)                                   <------ZmHOX2a(2)    <--                         <---------ALFIN1                                   <---------ARR14(2)    ---                       --------->RAP2.3(3)                     <------ZmHOX2a(2)      <------NtERF2                      <------NtERF2                            --------->CCA1(2)     <---------DEAR4(2)                     <---------RAP2.3(1)                      --------->ARR14(2)     <---------ATERF1(1)                     ------>NtERF2                            <---------ARR14(2)    <---------DEAR3(1)                     <---------ATERF1(1)                      <---------ARR11(3)    --------->ATERF1(1)        --------->TOE1(1)--------->MYB46(3)        <<<<<<<<<<<<<<<<<LFY     <---------ARR11(3)   ----  --------->WRKY12  <---------ANAC58           ----------->RAV1(2)          --------->ARR11(3)   ---- ----ANAC58         <---------ANAC58           <---------At4g35610          --------->ARR14(2)   ---- ----ANAC58---------->DOF2 ------>MYB83---------->DOF2        --------->ARR11(3)   ------>NtERF2 >>>> -SPL7 <---------LBD16--------->ATERF1(1)      --------->At4g35610      --------->MYB52(1)  <--------   agcgtagacctcggaaagaatggcgccccaaccaccatggccaaagctcatctgaacaatggaagatccaaacaaaacgatctgaggccgcgcgggtcca  3512900 -ARR14(2)                                                             ---------->DOF2 >ARR14(2)                                                          --------->LBD16       --------->ICU4 -------ATHB12                                                     --------->DEAR3(1)--------->LBD16 ------>MYB46(3)                       <---------At4g35610      <---------ALFIN1     --------->At4g35610 -->MYB83                              --------->At4g35610     --------->MYB46(3)   <---------MYB46(3) -->MYB46(1) ------>ZmHOX2a(1)         --------->ZAT2          <---------MYB55(2)  <---------LBD16 ---->P     <---------MYB59            <---------ZAT2    <----------DOF2           --------->SPL7 >>>>>>>>>>>>>LFY                <-----------HVH21    <---------MYB52(1)         <-----------HVH21 -PCF2   ------>ZmHOX2a(1)  ------>ZmHOX2a(1)        <---------RAP2.6(3)         <---------SPL7  ----   accattgtctccttcctaacctctctgttcctctgtttcagagctgaagacaggccgttctttctcccaccgcaaaagctaatcgtccggtgaagatgaa  3513000                                      <-------TEIL                                             ------             ------>ZmHOX2a(1)    --------->DAG2                                           <---------YAB1          <------ZmHOX2a(2)      --------->SPL7                                          --------->YAB1         --------->ARR14(2)     <---------MYB52(1)                                      <---------YAB1         <---------ARR14(2)    <---------SPL7      <---------AtLEC2                   <---------ICU4  --------->TOE1(3)          ---------->ID1       <-------TEIL                       <---------YAB1 ----------->RAV1(2)     <----------DOF2     --------->AHL20(2)   *TSS            <---------YAB1 ----->MYB46(3)        <---------DAG2--------->ALFIN1   ------->TEIL<-----------GT1  --------->ICU4   caaacctgagcgatcctctctctcactctttgtcgtaaggtgcgagattaaatgcatgaacgtctcgttttttcttcttgttttttgattattataacag  3513100                                                                         <---------MYB52(1)                                                                  <----------DOF2                                                                <-------TEIL                                                              ------->MYC2                                                              <-------PIF5                                                              <-------MYC4                                                              ------->MYC4                                                              ------->PIF5                                                              <-------PIF4                                                              ------->MYC3                                                              ------->PIF4                                                              <-------MYC2                                                              <-------MYC3                                                             --------->TGA1a                                                             <---------ANAC55(2)                                                             --------->ANAC55(2)                                                             ================bZIP_DOF      --------->ARR14(2)                                                             <---------ANAC58              <---------ARR14(2)                                                             <---------TGA1a              <------ZmHOX2a(1)                                                             ================bZIP_DOF   <---------TOE1(3)                 ------------>CBF                            <---------ANAC58    --------------->AGL15         ----------->GT1  <----------ID1                --------->YAB1 <---------ZAT6   <---------TOE2(3)    ---------->DOF2   --------->YAB1         ==========================bZIP_DOF  <----------DOF2   --------->AHL20(2) --------->AHL20(2)     <----------DOF2 <---------ANAC46<-----------GT1 ->GAMYB------------------------>ANAC81     <---------DAG2  ------------>OsbHLH66<---------------AGL15   acaaataaaagaagaaaaaaacaataaaaaaacaaacaaaacaaaaccttttgttatatcatcacgtgcattactgttatttccttttttaaggatttgt  3513200                                                                                  <----------DOF2                                                                               <---------ARR11(3)                                                                         <---------YAB1                                                                       --------->YAB1      <---------                                         <---------ANAC58             --------->ICU4   <----------DOF2                            ---------->DOF2                    ----------->GT1 --------->ARR11(3)   -                <---------DAG2           <---------ANAC58     --------->DAG2  --------->GLK1(1)     <                <----------DOF2        <-----------GT1       ---------->DOF2  <---------GLK1(1)     <   ttctcatactagttttctctttttgtttctcaaagtattttttacttgaaatgctctctaccaaaaagtaaaatgatgagaaatcttttctttctttttc  3513300                                                                                --------------->AGL15                                                                                <---------------AGL15            --------->TOE2(3)                                                  ----------------->AGL3          <-----------ARR10                               ---------->DOF2      ======================          --------->GLK1(2)                           <----------ID1        --------->ZAT18          --------->ARR11(3)                        ----------->GT1         <---------ZAT18    <----- -DOF2    <---------ARR11(3)  <---------ARR11(3)    --------->ANAC58       ----------->GT1    <------ -------->AHL20(1)            --------->ARR11(3)    --------->ANAC58      --------------->AtSPL8 ---------AHL20(1)          ------->TEIL          ---------->DOF2         <---------------AtSPL8 ---------ARR11(3)   <---------TOE2(3)       <----------DOF2       --------->YAB1    ---------->DOF2   aatatatatgaaaatcttagtttaagaatgaatatctcttgtataagctttggaaagaaacaaagtcaagaagaatagggtactaaataaagagattggg  3513400                                                     ---------->DOF2                                                  --------->ANAC58                                                <--------P                                              <------MYB83                                              <------MYB46(1)                                              ----------->GT1                                             --------->MYB46(2)                                             --------->MYB111(2)                                             <---------MYB46(3)                                             --------->MYB111(1)                                            <---------MYB55(1)                                            <--------P                                           <---------ANAC58                                           <---------ANAC58                                           <-------GAMYB                                          <------MYB83                                          --------->MYB55(2)                                          <---------DEAR3(2)                                          <------MYB46(1)                                          --------->MYB52(2)                     ------>MYB83                                          <---------MYB46(3)                     ------>MYB46(1)                                         <---------TOE1(2)                     --------------->AGL15                                         <---------TOE2(2)                    =======================                                --------->CCA1(2) --------->ANAC58            --------->ANAC58-------                     <--------ATHB1      <---------AtMYB61                    ----------------->AGL2                     --------->ATHB51   <---------MYB52(1)                    ----------------->AGL3                     <---------ICU4    <-------GAMYB --------->MYB52(1)       --------->ANAC58-------                    <---------ATHB51  <---------MYB46(3)                     ----------->RAV1(1) ===============================================================================================MADS_MADS ----ANAC46         <---------ATHB12  --------->MYB52(2)             ---------->DOF2        -------->P ---MYB46(3)        --------->ICU4    --------->MYB55(2)            <---------AHL20(2)   <------ZmHOX2a(2)   tagagagagagatttatgagcaataattcaaatgatatggtcgttggttggtaagtaaaggaacactgaattaaaggagcaccaaatatagatcaaccat  3513500                                                                          <-------MYC3                                                                          <-------MYC2                                                                          ------->MYC3                                                                          ------->MYC2                                                                          ------->PIF5                                                                         <---------ANAC55(2)                                                               --------->MYB46(3)                                                        <---------MYB46(3)<-------PIF5                                                        ----------->GT1  --------->ANAC46                                            <-----------------AGL3       --------->O2                                  ============================MADS_MADS  <---------TGA1a                                  <----------DOF2       <------MYB83<-----------GT1    <-----------GT1               =================================================bZIP_DOF =============================================================MADS_MADS  <---------O2 -->TOE2(3)                       --------------->AGL15 <------MYB46(1)  --------->TGA1a -->YAB1                      <----------DOF2  <---------AHL20(2) <---------MYB52(2)     --------->ICU4   atttttgaactcttcattcaatgtctcaccttctttctttatatgttatatatatggatggttcaacaaataaccacgtgaacatgttgaagtgattaca  3513600  Previous    Next  AGI:  At3g11210.1    Description:  GDSL-motif lipase/hydrolase family protein. similar to GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] (TAIR:AT2G38180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41352.1); contains InterPro domain Esterase, SGNH hydrolase-type, subgroup; (InterPro:IPR013831); contains InterPro domain Lipase, GDSL; (InterPro:IPR001087); contains InterPro domain Esterase, SGNH hydrolase-type (InterPro:IPR013830) Range:  from: 3510669    to: 3513066    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g11220.1    Description:  ELO1 (ELONGATA 1). similar to unnamed protein product [Vitis vinifera] (GB:CAO23066.1); contains InterPro domain PAXNEB (InterPro:IPR008728) Range:  from: 3513537    to: 3516414    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version