Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    --------->ZAT2                                                                                  <---------ZAT2                                                                                <-----------RAV1(2)                                                                                <---------HSFB2a(2)                                                                                <---------LBD16                                                                             =============HOX2a_HOX2a                                                                             <------ZmHOX2a(2)             --------->HSFB2a(1)                                         <---------At4g35610             --------->HSFC1(2)                                      <----------DOF2      --------->ARR14(2)           --------->At4g35610             <---------At4g35610          <----      <---------ARR14(2)           <---------At4g35610             --------->At4g35610       <-------    --------->HSFB2a(2)          --------->ZAT14                <---------ZAT2 --------->TOE1(2)-----  <---------LBD16           <---------ZAT14                     --------->At4g35610      ---------->DOF2 >RAP2.6(2) <---------YAB1  --------->ZAT14                     <---------At4g35610<------ZmHOX2a(1)   tttcttcggaaacgatgattccttcttctcttcactgagctctaagagcgagagtgagtcagactcggctgcttcagcgatcccaggagggaaaagaata  3494300                                             <------NtERF2                                            --------->LBD16                                           <---------DEAR3(1)                                           <---------ANAC46                                          <---------LBD16                                        --------->TGA1a                                        <---------O2 --------->ARR11(3)                                        --------->O2 <---------ARR14(2)                                        <---------TGA1a                          <------NtERF2                                       <---------LBD16 ------>ZmHOX2a(2)       <---------DEAR3(1)         <---------MYB52(1)            <---------At5g28300                     <---------ANAC46         --------->DOF5.7(2)         ----------->HVH21<------ZmHOX2a(2)       <---------LBD16        --------->TOE2(3)           <-----------HVH21<---------ARR11(3)      --------->LBD16 -----ARR14(2)                     --------->WOX13(1)--------->ARR14(2)      ------>NtERF2 --GLK1(2)                   <---------RAP2.6(3)   ----------->ARR10        <---------DEAR3(1) ---->MYB52(1)              --------->RAP2.6(2)  --------->CCA1(2)         <---------LBD16   tcggagtcatcgttaatgagttggaaatagccgaaatcagtcacggcggagataagatcgtcccattcaagtctatctccggcggagagagataccatcg  3494400                      <------MYB83                      <------MYB46(1)                     --------->ALFIN1                     <---------MYB46(3)                    <---------MYB52(1)                    <--------P---------->DOF2                    --------->ALFIN1                                                        <--------                   <-------GAMYB--------->ANAC58                                       --------->ARR14(2)                  <---------MYB46(3)                                         --------->At4g35610   <-                  <---------DEAR3(2)                                      <---------At4g35610   <----                 <---------DEAR3(1)                                       --------->At4g35610<-------               ------------>AtMYB77---------->DOF2           <---------ZAT14 --------->ZAT14<--------              ----------->HVH21 --------->ANAC58      ---------->DOF2   <---------WRKY12    <--------         --------->ALFIN1 <---------ANAC46     <---------DEAR3(1)     <-----------HVH21<---------ARR14(2)   gaagagaagggatggagcgacggttggggagtgaaagcaaaggagggagacggtggaaaagactggagagagcgtcaactgctgtctccgatttgctggt  3494500                                            <---------TCP16(1)                                         --------->ALFIN1                                       <---------O2                                       --------->DEAR3(1)                                       <---------ANAC46                                       ============================================MYC_MYB                                       <---------TGA1a                                       ====================================MYC_MYB                                      <------NtERF2                                      --------->ATERF1(1)                                     ------>NtERF2                                    --------->RRTF1(3)                                    --------->RAP2.3(2)                                    --------->RRTF1(2)                                    --------->DEAR3(1)                                    <---------DEAR3(1)                                    --------->RAP2.3(3)                                   --------->ORA47(2)                                   --------->ATERF1(1)                                   --------->ERF1                                   --------->RAP2.6(1)                                   --------->RRTF1(1)                                   --------->DEAR3(2)                                   --------->DEAR4(2)                                   <---------ABI4(2)                                   <------NtERF2                                   --------->RAP2.3(1)                                  <---------ERF1                                  <---------ORA47(2)                                  <---------RAP2.6(1)                                  <---------RRTF1(1)                                  <---------DEAR4(2)                                  <---------RAP2.3(1)                                 <---------DEAR3(1)                                 --------->DEAR3(1)                                 <---------RAP2.3(2)                                --------->ATERF1(1)                        <-------GAMYB                                --------->RAP2.3(1)                       --------->MYB55(2)                                <---------ABI4(2)                         <---------MYB46(3)                               <---------ORA47(2)                        <---------AtMYB61                               <---------RAP2.3(1)                     <---------MYB46(3)                               <---------ATERF1(1)                  <------MYB46(1)                              --------->ALFIN1                      <---------MYB46(3)                              <---------DEAR3(1)                   --------->MYB46(2)                             --------->ATERF1(1)                   --------->MYB111(2)                          <------NtERF2--------->O2                --------->ALFIN1                        --------->ETT(1)--------->LBD16            <---------MYB46(3)                        <---------DEAR3(1)  <---------TCP20        <---------AtMYB61 --------->At4g35610                       --------->ATERF1(1)<---------ATERF1(1)      --------->MYB111(1)                      <-----------HVH21--------->TGA1a             --------->MYB55(2)--------->ZAT2 -ANAC58          <---------bZIP60(2)--------->ABI4(1)             <---------DEAR3(1)<---------At4g35610 --------ANAC46   <---------ANAC46------>NtERF2       <---------ANAC58--------->ALFIN1          ----- -----AtMYB61   --------->MYB52(1)<---------ATERF1(1) <---------ANAC58<---------AtMYB61       ------- ----RAV1(1)   ----------->HVH21<------NtERF2  <---------ALFIN1   <--------P   <---------TOE2(3)----- -ANAC46       ----------->TGA1<---------DEAR4(2) --------->DEAR3(1)<------MYB83     <---------ZAT2 -ANAC58     <---------AtLEC2<------ZmHOX2a(1)<---------ABI4(2)<---------TOE2(3)<---------At4g35610   ggtgttgagatgtgagcatgacggggtcggaggaggcgccgccgtggctccaccgtgcttgatcaaaggttggtggtggttgaggtgagctgaagagaaa  3494600                                                                                                    -                                                                                                    -                                                                                                    <                                                                                                    <                                                                          --------->ANAC58          -                                                                          --------->ANAC58          <                                                                        <---------AtLEC2            <                                                                      --------->ANAC46              -                                                                      --------->ANAC58              -                                                                      --------->ANAC58              <                                                                   --------->REM1(2)               <-                                                                   <---------ARR14(2)              --                                                                   --------->ARR14(2)    <----------DOF2                                                                <---------ANAC58 ----------->TBP <---                                                                <---------ANAC46 --------->CCA1(2) --    ---------->DOF2                   <---------ARR14(2)        <---------ANAC55(1)      ============ ---->ANAC58       <----------DOF2    --------->ARR14(2)    <---------ANAC58    <---------ARR11(3) <- --->DOF2      ----------->HVH21   <---------ANAC46         <---------ANAC58   <-----------TBP   <--- ---->ANAC58------->TEIL        <------NtERF2              *TSS <---------ANAC58--------->AHL20(1)---   gccattgaaagatggatgtgactttggaagaggcagagcgtatatgtgaaaacatatgtataacttgcgtgtacgcatggaatatataaggctttactca  3494700           <---------YAB1    --------->LBD16   <---------ANAC58   <---------ANAC58  <---------LBD16 --------->ALFIN1 ------>MYC4 ------>PIF5 -------MYC4 -------PIF5 ------>PIF4 -------PIF4 -------MYC3 ------>MYC3 ------>MYC2 -------MYC2 --------TGA1a ------->TGA1a       ------>MYB83 ---------OsbHLH66   ------>MYB46(1)                           <---------YAB1 ------->O2<---------ANAC55(2)                        ------------>CBF ========bZIP_DOF  --------->TOE2(3)             <---------AHL20(2) --------O2<---------ANAC46 <-----------GT1      --------->AHL20(2)                 --------->YAB1 ------ALFIN1   <-----------GT1              --------->ICU4  <-----------GT1<-------TEIL --------->OsbHLH66<---------MYB59      ----------->GT1    <---------ARR11(3)    --------->YAB1  <---   cacgtgcgggattatgtataacctaattttctaccatcttatttgtaaaaattaaaaacaatatcaccattcaccaagtacatttatcatgttttttttc  3494800                                       <---------YAB1                                    <---------YAB1                                                ---                                  <--------HAHB4                                                 <---                                  <---------ICU4                                                 <---                                  --------->ATHB51                                            -------                                  -------->ATHB1                                          <------NtERF2                                  --------->YAB1                                          --------->At5g28300                                 <---------ATHB51                                        --------->RAP2.6(2)                                 <---------YAB1                                          ------>NtERF2                                 --------->ICU4                        <---------ANAC58  ----------->GT1                              <---------YAB1                           <---------ANAC58 <---------RAP2.6(2)                            <-----------GT1                      <-----------GT1        <---------DEAR3(1)                       --------->AHL20(2)                   ------->MYC3                <---------ATERF1(2) -------DOF2           <---------AHL20(2)                   <-------MYC3                --------->ATERF1(2)   tttcaatgacataagttttgcatatttattttacaattattatgttattttttccgataacacgtttttacatgcttgtttaaactagaggcggcaaata  3494900                                                                                    --------->LBD16                                                                                   --------->ANAC55(2)                                                                                   <---------ANAC55(2)                                                                                   <---------ANAC46                                                                                  <---------LBD16                                                                              <---------ICU4                                                                             <---------AHL20(2)                                                                             --------->AHL20(2)      <-----------RAV1(1)                                                   <---------WOX13(1)  <---------AHL20(2)                                                      --------->YAB1  --------->AHL20(2)                                                      ----------->GT1 ------>AHL20(2)                                                          --------->ATHB12 ------AHL20(2)          <---------GLK1(2)                               --------->ICU4 ------YAB1              <---------ARR11(3)<---------TOE2(3)             <---------YAB1             < -->ICU4               --------------->AGL15                          <------ZmHOX2a(1)            <-   ttatttatatgtgggtttgccattacagattttagcaattttgttaagaaaattgttatctaacaacatagaggaatgattaattacggaaatttgtttt  3495000                                                                                     --------->ANAC58                                                                                     ----------->GT1                                                                                ------->GAMYB                                                                               --------->MYB46(3)                                                                              ------>MYB83                                                                              ------>MYB46(1)                                                                             --------->MYB52(1)                                                                             ----------->RAV1(1)                                                                            ------->GAMYB       ----------->GT1                                                     --------->MYB46(3)     --- -------GAMYB                               <---------GLK1(2)            <-----------GT1      <------ --------MYB46(3)               <---------YAB1 ----------->GT1        --------->YAB1 --------->ANAC58   ttggttgaaccgataaatattcttatatgtgtttattagtattttagaatcgcaaaatgaaggaatacacaaatataaccaacagacaagaaaaacatga  3495100                                                                                   <----------DOF2                                                                                  ------>ZmHOX2a(2)                                                                                 <---------RVE1(1)                                                                                 <------ZmHOX2a(2)                                                                                --------->ARR14(2)                                                     ===================================HOX2a_HOX2a                                                     ====================================HOX2a_HOX2a                                                     <------ZmHOX2a(1)          <---------ARR11(3)                                                    ----------->GT1             <---------ARR14(2)       <----------DOF2                             <---------TOE2(3)            --------->ARR11(3)      <---------ICU4                             --------->ICU4                 --------->ARR14(3)     <---------YAB1                       ----------->GT1                       <---------ARR14(3)   --------->YAB1                         <---------ANAC46  <---------YAB1     --------->RVE1(1) ------>AHL20(2)                        <---------ANAC46   <---------------------WRI1           ----- ---YAB1   <-----------GT1<---------MYB46(3)   --------->YAB1               ---------->DOF2----------   taaaatcatctttatacaaaattgatatttgttgaattgttgatgtgtataatgaggaaaatatgatacaaactaagtaaaagatcttttgtatagtaaa  3495200  Previous    Next  AGI:  At3g11150.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO41383.1); contains domain PTHR10209 (PTHR10209); contains domain SSF51197 (SSF51197); contains domain G3DSA:2.60.120.330 (G3DSA:2.60.120.330) Range:  from: 3492873    to: 3494659    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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