Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             <----------DOF2        <-----------GT1   <---------AHL20(2)  <---------YAB1                                                                           <--------- ------->AHL20(1)                                                                       <---------ALFIN1 --------AHL20(1)                                        ----------->GT1               <---------ZAT18 --------AHL20(2)                                       --------->DAG2               --------->ZAT18 ------->AHL20(2)                                 ----------->RAV1(1)                --------->PCF2 ----AHL20(2)       <---------ANAC58             --------->MYB46(3)--------->At4g35610 --------->ZAT18 --->AHL20(2)       <---------ANAC58        --------->YAB1    --------->CCA1(2)      <---------ZAT18 ---AHL20(2)   <----------DOF2           --------->YAB1---------->DOF2               ------>NtERF2   ttttattatttgactttcttttgcttaagctatgtataatctacaataagaaccacaaaaagtgatataagctcagttctatattggtgcccactttgta  3474600                                                        <---------ANAC58                                                        <---------ANAC58                                                    <---------WOX13(1)                                                  --------->ATHB12   <-----------GT1                              <---------WOX13(1) --------->HSFB2a(1)                            <----------DOF2 --------->HSFC1(2)                            <---------AtLEC2 <---------HSFC1(2)                            <---------ANAC58                    <---------ANAC58 <---------HSFB2a(1)  ---------->DOF2          <---------ANAC58           ---------->DOF2        <<<< -DOF2 ------>ZmHOX2a(1)    ---------->DOF2  <---------YAB1     --------->ZAT6     <---------ANAC58   agaaatttcctcttcaatttggagcaaagtgaaagctattttgtattttgcttgattgacttgtttccactaatccaaaagtcttgcttctcttgtttct  3474700                                   <----------DOF2                                    --------->ATHB12                                   --------->TOE1(3)                               <---------ICU4                                   --------->TOE2(3)                               --------->YAB1                   <---------At4g35610                                            --------->ICU4                   --------->At4g35610<-----------GT1                             <---------YAB1      ---------->DOF2           <-----------GT1                             --------->AHL20(1)  --------->HSFB2a(2)        ----------->GT1                                <---------ARR11(3)  <---------HSFB2a(2)   <---------ANAC46--------->ZAT6        <----------DOF2  <---------YAB1 <<<<<TBF1----------->GT1 --------->ALFIN1        --------->ZAT6      <-----------GT1<---------YAB1   tcttctataaaagagaaaattagctgatgtgttgttactttaactctctctatctctatagtacctttgatttttcaatatatgattatgatttatggac  3474800                     --------->ICU4                  --------->AHL20(2)                ----------->GT1                <---------ANAC55(2)                --------->ANAC55(2)              --------->YAB1             <---------ATHB12            ------>MYB83            ------>MYB46(1)           --------->WOX13(1)         ---------->DOF2  <---------YAB1          --------->AtMYB61     --------->DAG2       --------->YAB1                 <-----------GT1         ------------>CBF      ---------->DOF2      --------->ICU4        ---------->ID1      --------->ANAC58     --------->ANAC58         <---------ATHB12  <---------ANAC58      --------->ANAC58     --------->ANAC58 ----------->RAV1(1)       <---------ANAC58   tcgaactcacgaccaatcatgtaattagcaaggaaaagctcaaagccaacacaaatgatgaataggcccatgccttgtcccatttgtttccttctctcta  3474900                                                      <---------TOE2(3)                                                    ---------->DOF2                                                   <---------AHL20(2)                                                 ----------->TBP                                                <---------ARR11(3)                                                --------->AHL20(1)                                  -                           ----------->GT1      <---------AHL20(1)                                 <-                          --------->DAG2   <---------YAB1     --------->ANAC58            <---------MYB59 <----------DOF2         ---------->DOF2   ------------>CBF   --------->ANAC58      xxxxxxxxxxxxxxxxx   ttactttcaaaaacactcttcttcacaaaaagttaaaagactcttatcaatatataaaggaagcacgagataaaacttagaaaaaacgagagcctaacat  3475000                                                                                      --------->ARR11(3)                                                                                      <---------ARR11(3)                                                                                    --------->ANAC58            --------->YAB1                                                <---------ZAT18    --------->AtMYB61                <---------At4g35610                  <---------At4g35610 -------->MYB46(3)                   --------->At4g35610                  --------->ZAT14 --------At5g28300           --------->DAG2                 ---------->DOF2         --------->ANAC58 xxxxxx>smallRNA(l2)        ---------->DOF2                <------ZmHOX2a(2) ------>NtERF2      -----   ttaccaccaaaaaatcaaaacaaacaaacaaaaagtttgagatgagagggcatgagccacgatcaagctcatcttgtgcagcctgcaagctcttgaagag  3475100                                                                                                   --                                                                                           --------->TOE2(3)                                                                                           <---------                                                                                          --------->bZIP60(2)                                                                                          --------->O2                                                                                          --------->ANAC58                                             <---------ANAC58                             --------->ANAC58                                             <---------ANAC46                             <---------O2                                        --------->O2                                  <---------ZAT2                                        <---------O2                                  --------->ZAT2<                  --------->ARR14(2)    ================================bZIP_DOF      <------NtERF2<-                  <---------ARR14(2)    --------->ANAC55(2)                          --------->ANAC58                ==================================bZIP_DOF                  ========================bZIP_DOF          ------>MYB46(1)               --------->TGA1a                --------->DAG2--------->ANAC58          ------>MYB83                  <---------TGA1a               ==============================bZIP_DOF         <---------ALFIN1               ===============================================bZIP_DOF    <-        --------->MYB46(3)              =========================================bZIP_DOF --------->TGA1a       --------->ANAC58            <---------At4g35610                ---------->DOF2--------->ANAC46       --------->ANAC58            --------->At4g35610            <-------TEIL     --------->ATERF1(1)     <---------ALFIN1      ------>ZmHOX2a(1) <---------ANAC58=======================================bZIP_DOF ---->CCA1(2)   <----------DOF2<-----------GT1               ---------->DOF2<----------DOF2<---------   acgatgcacacccacttgcattttcgctccttatttccgctcaagtgacttgataactttcgccaaagtccataaagtctttggagccagcaacgtcagt  3475200                                                                   --------->ARR14(2)                                                                   <---------ARR14(2)      <-------GAMYB                                                                <---------TOE1(3)        <---------TOE2(3)             --------->ARR11(3)                             <---------ZAT2               <---------TOE1(3)    <---------HSFB2a(2)                                     <---------At4g35610         <---------At5g28300    --------->HSFB2a(2)                   <---------DOF5.7(2)   <---------TOE2(3)  ------>ZmHOX2a(1) ------->HSFC1(2)                       <---------MYB52(1)  --------->At4g35610  ------>ZmHOX2a(2) --HVH21     --------->ARR14(2)         --------->DOF5.7(2) --------->ZAT2     --------->ARR11(3) ---------GLK1(2)------>ZmHOX2a(1) ------------>MYB.PH3(1) ------->TEIL        --------->ARR14(2) --------HSFC1(2)--------->LBD16--------->ANAC58    <---------ANAC58           <---------ARR11(3) --------At4g35610              --------->ANAC46    <---------ANAC58           <---------ARR14(2) --TGA1      <---------ARR14(2) --------->ANAC58    <---------ANAC46<-------TEIL<------ZmHOX2a(2)   aagcttctcggtgaagttcctgaagaacagagacaagaaaccgttaactccttggcttatgaagctgaggttcgtctcaaggatcctgtttacggttgca  3475300                                                             <---------ALFIN1                       =                                                           --------->ANAC58                    ------                                                           --------->ANAC58                    ======                                                         <---------ANAC58                     -------                --------->At4g35610                      <---------ANAC46                   ---------                <---------ZAT14                     <-----------RAV1(1)                    --------->MYB46(3)                <---------At4g35610                 <---------MYB46(3)                  <---------WRKY12                --------->ZAT14                   <---------At4g35610                   <---------WRKY38(1)            <---------ARR14(2)                <------ZmHOX2a(2)                        --------->WRKY18(1)            --------->ARR14(2)               <---------ARR11(3)            ----------------->AGL1   -         <---------ANAC58                    --------->ARR11(3)            <-----------------AGL2   <         <---------ANAC58             --------->REM1(1)  <---------ANAC58  <-----------------AGL1   -   ttggagccatagcgtctctgcagaagaagatgctcgagcttcaacacgatctagctgttgctcgcactcgactacttgcccattctggggtcaacaacag  3475400                               <---------At4g35610                            <---------ANAC58                           --------->At4g35610       <---------DAG2                           <---------ZAT2            --------->TOE1(3)      --------->ATHB12                           --------->ZAT2            --------->TOE2(3)    <---------WOX13(1)         <----------DOF2   <---------At4g35610 --------------->AtSPL8     <----------DOF2 ===================bZIP_DOF<---------ANAC58  ------>ZmHOX2a(2)          <---------ANAC46 ->GAMYB --------------------->WRI1 <---------DAG2<---------CCA1(2)      <---------ANAC58 =========MYC_MYB       =============================HOX2a_HOX2a         <---------ANAC58 -->MYB46(3)            ------>ZmHOX2a(1)   --------->ARR11(3)      <---------REM1(1) -->RAV1(1)             --------->LBD16 <---------ANAC58            <-----------RAV1(1)           <-- -------->O2          ----------->RAV1(2)   <---------ARR11(3) <---------ANAC46                   <-- ---------O2          <---------LBD16   <---------ANAC58       <---------ANAC58            --------->YAB1 -------->TGA1a  <---------GLK1(2)  <----------DOF2------->TEIL<---------ANAC58            <---------ICU4   ccaagtgtcccctttggatgattctcctgagcttgctgcttttcttgatcttgtaccttatagtgacttgatgttgcttgatgggtctactaatcttgat  3475500  Previous    Next  AGI:  At3g11090.1    Description:  LBD21 (LOB DOMAIN-CONTAINING PROTEIN 21). Identical to Putative LOB domain-containing protein 21 (LBD21) [Arabidopsis Thaliana] (GB:Q9SRL8); similar to LBD25 (LOB DOMAIN-CONTAINING PROTEIN 25) [Arabidopsis thaliana] (TAIR:AT3G27650.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41404.1); contains InterPro domain Lateral organ boundaries, LOB (InterPro:IPR004883) Range:  from: 3475042    to: 3475539    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version