Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 ------>ZmHOX2a(2)                                                                             <---------ARR14(3)                               <---------ANAC46                              --------->AGP1             --------->HSFB2a(1)                                             --------->ARR14(2)             --------->HSFC1(2)<---------ANAC58                              <---------ARR11(3)             <---------HSFC1(2)<---------ANAC58                              <---------ARR14(2)             <---------HSFB2a(1)<-------GAMYB                          --------->MYB52(1)         <---------TOE2(3)  --------->ALFIN1                         <---------MYB52(2)     --------->YAB1       --------->ALFIN1                      <---------TOE2(3)          --------->AtMYB61   --------->AHL20(1)     <-----------RAV1(1)            --------------->AGL15<------ZmHOX2a(2)  --------->YAB1         <---------ARR11(3)              <---------------AGL15--------->CCA1(2)  --------->AHL20(2)     --------->ARR11(3)          <---------HSFB2a(2)     --------->ARR11(3) -------->AHL20(2)--------->HSFB2a(2)                --------->HSFB2a(2)     --------->ARR14(3) ----->AHL20(2)   <---------HSFB2a(2)     <---------GLK1(2) --------->YAB1   <-----------ARR10   aaaataatattaagaaacttctagcaagatgtggcgttgtctctgattctgacttctagcaatattaagaaactaacaagatctacaggctcaccaaaac  3467400                                                             <----------DOF2                                                       --------->ZAT6                                <-------TEIL           <---------ALFIN1                         <----------DOF2             ----------->RAV1(1)                            >   atgttgttttatgtcttccataggttcctttaagtccatctactcaaaacaaatccaacactgctttagcaaaatagtttgcacagacaatgtgactact  3467500                                                        ------>MYB83                                                      <---------MYB59                                                     --------->ANAC55(2)                                                     <---------ANAC55(2)                           <-                                               <---------YAB1                                      --             <-----------GT1                <----------DOF2           <---------ANAC58        <------         --------->WOX13(1)            <---------ARR11(3)             <---------ANAC58        <------ --------->MYB46(3)                    --------->ARR11(3)            <-------TEIL        <----------DOF2 >>>>>>>>>>>>>>>>LFY                  <---------CCA1(2) ------>MYB46(1)   <---------At4g35610 <------   ccatccaatgtcaattaacaaaaccacttaaatccaactcatatctcttttgattacctaatagaaatatgtgcgtagctcatgttttgctcttttgcat  3467600                                                --------->ANAC46                                                --------->ANAC58     <----------DOF2                            --------->ANAC58                                 <--- --------bZIP60(1)                 --------->AHL20(2)                                            ---- ------->bZIP60(1)                 --------->YAB1                  ---------->DOF2               <--- ---ANAC58                        <---------ATHB12             --------->ANAC58           --------->ZAT6 ---ANAC58                      --------->WOX13(1)             --------->ANAC58          --------->ZAT14 ---AtLEC2  <---------ICU4     <---------WRKY38(1)         <---------HSFB2a(2)           <---------ZAT14   gatgtcccttttagtaattgcaatatggcatagtcaatgaaattgctaaaacgacatcgttcaagaagcaaaagagctcataaacaccctctacactatc  3467700              ------>NtERF2             --------->ANAC58                    <---------ARR14(2)             --------->ANAC46                    <---------GLK1(2)             --------->ANAC58                    --------->ARR14(2)  ----------->GT1   --------->ZAT14           --------->LBD16 ------HSFC1(1)----------->RAV1(2)            ------>ZmHOX2a(1) ----->HSFB2a(2)    <---------ZAT18  <------------CBF ------HSFB2a(2) --------------------->WRI1  <---------LBD16*TSS       --------------->AtSPL8     <--   tagaaggttacatagacgcctgtggacttatagtcgtcaaattgattcctggattcgccgaaaactcgaaatcgttgtactctctcagttactatctctc  3467800                                                         <---------At4g35610                      --------->GLK1(2)       --------->LBD16                     <---------ARR14(2)   --------->ARR14(2)              --------->MYB52(1)          <---------ARR14(2)             ----------->HVH21           <---------GLK1(1)          --------->GLK1(2)       <---------ARR14(2)     --------->At4g35610                   ------          --------->ARR14(2)      --------->GLK1(2)     --------->GLK1(2)              --------->CCA1(2)          <---------ARR14(2)      --------->ARR14(2)   <---------GLK1(2)              --------->ARR14(2)       <---------ANAC58       ------>NtERF2   <---------HSFB2a(2)                     <---------ARR14(2)       <---------ANAC58      --------->ANAC46 --------->HSFB2a(2)           <---------ARR14(2) ------ ---------HVH21      --------->ARR14(2)  --------->GLK1(1)      >>>>>>>>>TBF1    --------->MYB52(1)   tgtctcatggcgaatccgacggagaacctcgacgcgaatccacaaatccgagaaccagaagctgaagaagaagttgaagaactgaacggatacgaaggtg  3467900                                                                     ------>ZmHOX2a(2)                                                            ---------->DOF2        --------->GLK1(2)                                                          --------->ANAC58  --------->ETT(2)                                                          --------->ANAC58  <---------ETT(2)                                                         --------->LBD16  --------->ZAT14                                                       --------->TOE1(2)  <---------ZAT14                                                       <---------LBD16    --------->REM1(2)        <-                <---------YAB1                      ---------->DOF2 <------ZmHOX2a(2)        <-------      <------ZmHOX2a(1)                       <---------ARR11(3)   --------->ARR14(2)        -------- ----->HVH21 ----------->TGA1                <---------GLK1(1)     <---------ARR14(2)        <------- ----->TGA1--------->At4g35610 ----------->HVH21--------->TOE2(3) <---------ARR14(1)        <------NtERF2   acgatggaggagaagatgacgatggagaagacgatgacaccgagtcgaaatctcaaacgcgcgaaagcggatccagtgtagacagaatcaaggcggaatc  3468000                                  <---------ANAC58                                  <---------ANAC58                                  <---------ANAC46                                  --------->ANAC55(2)                                  <---------ANAC55(1)                                 --------->ABI4(2)                   --------->At4g35610       <---------ANAC55(2)                   <---------At4g35610       <---------ANAC46                --------->ZAT2   <-------TEIL--------->ANAC55(2)                <---------At4g35610          --------->bZIP60(1)                --------->At4g35610  --------->REM1(2)          --------->ARR14(2)    --------->ALFIN1         <-------GAMYB         ------->PIF5  <---------O2         ==============================================MYC_MYB        <---------MYB46(3)     <---------MYB52(1)        <---------DEAR3(2)     <-------PIF5  --------->O2      <---------MYB52(1)     <---------DREB2C(2)     <-----------HVH21       --------->ATERF1(2)    <---------ANAC58      ----------->HVH21  <---------TGA1a                               --------->At4g35610    <---------ANAC58    ------>ZmHOX2a(1)    --------->TGA1a                               <---------At4g35610    <---------ANAC46  ----------->RAV1(2) --------->ANAC46                              ---------->DOF2 ---------DOF2  <---------ZAT2<---------DEAR3(2)            <---------ARR14(2)      --------->ATHB12 --GLK1(2)<---------ARR14(2)<---------LBD16  <---------bZIP60(1)                   <---------YAB1 ->ARR14(2)  <---------ANAC58<---------ATERF1(2)  <---------YAB1                 <---------CCA1(2) --ARR14(2)  <---------ANAC58<---------DEAR3(1)   --------->ICU4            <------ZmHOX2a(1)     ---   gctattccgtcggatgcgagctgctcctgtgccggtgcgtgttcacgacgtgattatcggtggaaacgagaagactaaggaccatatcattgaagcggaa  3468100                                                                                 --------->ARR11(3)                                                                                <---------CCA1(1)                                                                                --------->CCA1(1)                                                                                --------->RVE1(1)                                                                                --------->GLK1(1)                                                                               --------->ARR11(3)                                                                           <---------MYB52(1)                                                                          <-------GAMYB                                                                         <---------ANAC58                                                                         <---------ANAC58                                                                        --------->SPL7                                                                       <---------MYB52(1)                                                                      --------->LBD16                                                                     <---------ANAC58                                                                     <---------ANAC58                               --------->ARR11(3)                --------->GLK1(1)                       <-------MYC3                              <---------GLK1(1)                      --------->ANAC46              <--------P   <---------HSFB2a(1)                      --------->O2        --------->HSFC1(2)     --------->HSFB2a(1)         --------                      <---------O2        --------->HSFB2a(1)   <---------ARR11(1)          <--------                    <---------ALFIN1      <---------HSFC1(2)    --------->ARR14(2)          <--------                 ------>NtERF2 <---------ARR11(3)  <-------GAMYB<---------ARR14(2)  <----------DOF2                 <---------ATERF1(1) <---------HSFC1(1)         <-----------ARR10<---------ARR11(3)                --------->DEAR3(1)   <---------HSFB2a(2)        ------->TEIL   <---------ARR11(3)      <-----------HVH21------->MYC3  --------->HSFB2a(2)       <---------GLK1(2)<---------RVE1(1) <-- ------>ALFIN1  ----------->HVH21    --------->HSFC1(1)        <---------CCA1(2)<---------GLK1(1)----   gtggatgctgtgagagaggcgaccacgttgcaagagcttctcgaagcatctagggttgccaattcgaatctccgtgcgttagatatctttgattccgtca  3468200                               ------>ZmHOX2a(1)                               --------->LBD16                                     --------->ORA47(1)                         <---------At4g35610                                      --------->DEAR3(1)                         --------->ZAT2                                           --------->MYB46(3)   <---------YAB1        --------->At4g35610                  --------->HSFB2a(2)--------->At4g35610 ->LBD16              ------>ZmHOX2a(1)                      --------->ETT(2)    --------->DEAR3(2) -ANAC55(2)           --------->LBD16                       <------NtERF2        <---------At4g35610- -ANAC46 <---------GLK1(2)   ----------->RAV1(2)       <---------O2           ----------->HVH21     - -------ICU4        ----------->RAV1(2)                --------->O2  ---------->DOF2               <- ----->ICU4        ------>ZmHOX2a(1)  >>>>>>>>>>>>>>>>>LFY<---------DEAR3(1) <-----------HVH21 ------   acattacgcttgattctggtcctcctgagcttcctggtactaccaatgtggtaatcgacgtcgtcgagagcaaaagccctctcaccggccaaattggtgc  3468300  Previous    Next  AGI:  At3g11070.1    Description:  outer membrane OMP85 family protein. similar to outer membrane OMP85 family protein [Arabidopsis thaliana] (TAIR:AT5G05520.1); similar to unknown [Populus trichocarpa] (GB:ABK94973.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41408.1); contains InterPro domain Surface antigen variable number; (InterPro:IPR010827); contains InterPro domain Bacterial surface antigen (D15); (InterPro:IPR000184) Range:  from: 3467760    to: 3470101    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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