Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           --------->At4g35610                                         <---------At4g35610                                        --------->MYB52(2)                                      --------->DOF5.7(2)                                      <---------MYB52(1)                                     <-------GAMYB                                     <-----------HVH21    ---------->DOF2            <----------DOF2                                        <---------TOE2(3) ------ANAC58                  <---------DAG2                                        <-----------GT1 ------ANAC58             ------>ZmHOX2a(1)                    --------->LBD16       --------->MYB52(1) -->DAG2       --------->O2 <---------ALFIN1                 <---------LBD16  ----------->GT1 -->DOF2       <---------O2 --------->REM1(1)          --------->ARR14(2)  --------->CCA1(2)        -   cgtgatcaaagcatgtctcgtctccatcctacacttttccgttagctgaataagccctatccctccggtgaacaacgatatggtgaataacgatatgtat  3466600                                            <---------ANAC46                                           <------NtERF2                                          <---------RAP2.3(1)                                       --------->MYB52(1)                  --------->HSFB2a(2)                                    <---------STY1(2)                      --------->LBD16                  --------->LBD16   --------->STY1(2)                 <---------ZAT2                 --------->ANAC46   --------->ZAT2                    --------->ZAT2               <-           ------->MYC2            --------->ANAC46                  --------->ANAC58        --------           <-------MYC3            --------->ANAC58             --------->ANAC58             <-------           <-------MYC2       <---------ZAT18                   --------->ANAC46            ---------           ------->MYC3       --------->ZAT18    <---------YAB1 --------->ANAC58           <------ZmHOX2a(1)        <---------ALFIN1      <---------ZAT14<----------DOF2 <-------TEIL  <---------HSFB2a(2)   ---- --------->DOF2 <---------LBD16    --------->ANAC58  --------->ZAT6  --------->ANAC58----------->RAV1(2)   aacaaagacaacacgttctccgtaaacacgagtgaacaagctagcggcgttatgaacactaggtacaaggcaagctccgagaacacaacctgaggaatcc  3466700                                                         --------->ARR11(3)                                                        <---------RVE1(1)                                                        --------->GLK1(1)                                                        <---------GLK1(1)                      --------->REM1(2)                 --------->CCA1(1)                    --------->LBD16                    <---------ARR11(3)                          <-                   <---------ANAC58       ------>ZmHOX2a(2)                       <-----------RAV1(1)       <---------REM1(1)                  <---------DEAR3(1)        <-----------HVH21             <--     <---------ANAC46--------->ALFIN1   --------->GLK1(2)<---------ARR11(3)<---------ANAC46       --- ---------DOF2     <---------ANAC46     --------->ARR14(2)       --------->ARR14(2)               <-- ->ARR14(2)  <---------ZAT18            <---------ARR14(2)       <---------ARR14(2)               <-- --ARR14(2)  --------->ZAT14     <---------ANAC46      --------->ARR11(3)  <---------ANAC58  -------- >GLK1(1) ----------->GT1     --------->ALFIN1     ---------->DOF2  <-----------TGA1 <-----------RAV1(1) -->ZmHOX2a(1)     <---------ANAC58    <------ZmHOX2a(1)--------->RVE1(1)  <---------ANAC58  --------   tctttttaggtgtagtaaactccgtgtagcaagtggagggaggatcggtgaagaaaagatatctgagtatcgtcactgcgtagaatgttgtggcactgac  3466800    <---------CCA1(2)  --------->DEAR3(1) --------ALFIN1 -------SPL7                                                                                       XX ------>ZAT18--------->ARR14(2)                                    ----------------->AGL1        ---- -------ABI4(2)          <------ZmHOX2a(1)                       <----------ID1             <-------- -------ZAT14<---------ARR14(2)   --------->At4g35610    --------->CCA1(2)                  <-------- --->HVH21  <------ZmHOX2a(1)   <-----------RAV1(2)     <---------ARR14(2)             --------->ATHB12 ->WRKY12 <---------TOE1(2)    <---------At4g35610      --------->ARR14(2)      <---------ZAT14  ----   cgcaccgtctcttaggaaccgagacgaggagtcaccagatggcaagagaaggttgagggatatggagaggccaaagatggagagtagagtcattgcatac  3466900                                                          <---------CCA1(2)                                                    --------->ARR11(3)     --------->At4g35610                            <-----------ARR10     ------>ZmHOX2a(1)                              <---------ARR11(3) XXXXXXXXXXXXXXXXXX>MIR162A/B                    --------->ANAC55(2) ----->TOE2(3)                                   <---------ANAC55(2) -ANAC58                    <-----------GT1   <---------MYB52(1)                     <----------DOF2 -ANAC58                 <----------DOF2  <---------------AGL15                ---------->DOF2 ----->YAB1      --------->YAB1           --------------->AGL15         <----------DOF2         -----   cataatcctctgcatacaatcacatctcttttactcttcatcttctccattaagtatctcatctctctctctctcttttttaaaaggctttatctctcct  3467000                                          <---------REM1(1)               <------------CBF                               <------MYB83                              --------->ATHB12                               ----------->GT1                          <---------YAB1            <--                               <------MYB46(1)                        <---------ICU4            <----    <---------ANAC46          --------->ALFIN1              <---------At4g35610            ------->MYC3 ----------->HVH21            <---------AtMYB61        <------------CBF<----------DOF2     <-------MYC3 ->ZmHOX2a(1)        <---------YAB1       --------->ALFIN1  --------->At4g35610    --------->ANAC46   cgtgtgatgggtttcagagacttaatatagggatggtgaaataggtgtagaactaggtattgaactgactaatctttattgattcacaaaacatgtgtat  3467100                                                                                     --------->YAB1                                                                                ------------>CBF                                                                       --------->ANAC58                                                                       --------->ANAC58                                                                       --------->ANAC46                                                                     <-----------GT1 <--------ATHB1                                                                    <---------ARR14(2)                                                                    --------->ARR14(2)          <------------CBF                                        ---------->TaMYB80<---------ATHB12 -------AHL20(2)                   ------>ZmHOX2a(1)         ---------->DOF2    ----------------->AGL3 -------TBP             --------->At4g35610  <------ZmHOX2a(1)    <---------KAN4(2) <---------ATHB51   ttatacaagagtcattgtatgtgataagctcaaactcctaaactataggaactaaaacatatcaaaagaatatacgacatgtcccaataatagggttttc  3467200                                                               --------->ANAC58                                                       --------->ANAC46                                                <---------ARR14(2)                                                --------->ARR14(2)                                                <---------ARR11(3)                                                <---------ARR14(3)                                                --------->ARR11(3)                                                <-----------ARR10                                                --------->ARR14(3)                                                --------->AGP1 --------->ANAC58                                               --------->RVE1(1)------->GAMYB                                       ----------->GT1 <---------At4g35610                <---------AHL20(2)                                     ------->MYC2      --------->At4g35610            --------->AHL20(2)                                     <-------MYC2    <-----------GT1                --------->AHL20(2)                                     <-------MYC3 ------>ZmHOX2a(2)                --------->YAB1                             <---------YAB1   ----------->ARR10--------->ANAC46   --------->AHL20(2)-                 <----------DOF2     ------->MYC3<------ZmHOX2a(2)              --------->YAB1   ----        <----------DOF2   --------->AHL20(2)---------->DOF2   <---------------------WRI1  --------->AHL20(2)   gacttcttgtctttgaaggctttttagatttattatacacatgctaaaaagatcttcacctcacaacgaaacttactaacaaaaataaaaatataaatat  3467300                                                                               ------>ZmHOX2a(2)                                                                             <---------ARR14(3)                               <---------ANAC58                              <---------ARR11(3)             <---------HSFB2a(1)                                             --------->ARR14(3)             --------->HSFB2a(1)<-------GAMYB                                <---------ARR14(2)             --------->HSFC1(2)<---------ANAC46                              --------->ARR14(2)             <---------HSFC1(2)<---------ANAC58                        --------->MYB52(1)         <---------TOE2(3)  --------->ALFIN1                         <---------MYB52(2)     --------->YAB1       --------->ALFIN1                      <---------TOE2(3)   --------->AHL20(1)     <-----------RAV1(1)            <---------------AGL15<------ZmHOX2a(2)  --------->YAB1         <---------ARR11(3)              --------------->AGL15--------->CCA1(2)  --------->AHL20(2)     --------->ARR11(3)          <---------HSFB2a(2)     <-----------ARR10 -------->AHL20(2)--------->HSFB2a(2)                --------->HSFB2a(2)     --------->ARR11(3) ----->AHL20(2)   <---------HSFB2a(2)     <---------GLK1(2) --------->YAB1   --------->AGP1--------->AtMYB61   aaaataatattaagaaacttctagcaagatgtggcgttgtctctgattctgacttctagcaatattaagaaactaacaagatctacaggctcaccaaaac  3467400                                                             <----------DOF2                                                       <---------ALFIN1                                <-------TEIL           --------->ZAT6                         <----------DOF2             ----------->RAV1(1)                            >   atgttgttttatgtcttccataggttcctttaagtccatctactcaaaacaaatccaacactgctttagcaaaatagtttgcacagacaatgtgactact  3467500  Previous    Next  AGI:  At3g11060.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G06545.1) Range:  from: 3466309    to: 3466950    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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