Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    <---------ARR14(2)                          ------>MYB46(1)            <---------HSFC1(1)                                ------>MYB83            --------->HSFB2a(2)                           --------->MYB52(1)            <---------HSFB2a(2)                        --------->ANAC58            --------->HSFC1(1)                         --------->ANAC46                             -            >>>>>>>ZML2                                --------->ANAC58                            --       <---------HSFC1(2)                              --------->ANAC55(2)           <---------MYB46(3)       --------->HSFB2a(1)                             --------->TGA1a              <---------AtMYB61       <---------HSFB2a(1)                             <---------TGA1a        <---------ARR14(2) <---       <------MYB83                  <---------ZAT18   <---------ANAC55(2)<---------LBD16        ----       <------MYB46(1)  =========================================bZIP_DOF <---------At4g35610    <---       --------->HSFC1(2)--------->DAG2               --------------->AtSPL3  --------->ARR14(2) <---    <------ZmHOX2a(1)   ---------->DOF2  <---------ANAC46 ------->TEIL    --------->At4g35610    ----   gaccgaggaaggttctagagaaaccgaaaagcgagacagtgctccttggaattgctcacgtaccagcctattatgtagcggaactggtggtagaatcaga  3463200                                                      <---------At4g35610                                                      <---------ZAT2 -------->REM1(2)                                     --------->At4g35610                   <-------- --------->HVH21                            --------->ATHB12                                --------- ------O2                                <-----------------AG    --------->ARR11(3)   <---------HSFB2a(2) ----->TGA1a                        ----------->ARR10 --------->ZAT2              <---------TCP16(2) ------TGA1a              <---------ANAC58--------------->AGL15  <---------ARR11(3)------->TEIL ------ANAC46             <---------ANAC58<---------------AGL15------->TEIL      <---------ZAT18 ----->O2   <---------MYB52(1)   <---------ANAC46    --------->GLK1(2)<-----------GT1 --------->HSFB2a(2)   cgtgaaggcagtccgtttcatggttcaagcttgtggcgaagatgcttcattggggaagctggatgaagctcttaaccttcttgtggacctagaaggtctc  3463300                                           --------->ARR14(2)                                           <---------ARR14(2)                                           --------->ARR11(3)                                           <---------ARR11(3)                                          <---------GLK1(1)                                   <-----------GT1                             --------->ATHB12         --------->ATHB12      <---------AHL20(2)                       <----------DOF2        <---------YAB1       <---------AHL20(2)                      --------->LBD16      --------->YAB1        --------->AHL20(1)                     <---------LBD16  ---------->DOF2           <---------AHL20(1)          <---------GLK1(2)     <---------AHL20(2)   <- -ARR11(3)                 <---------AHL20(2)     ---------->ID1<---------WRKY18(1)                -- >ARR11(3)          --------->GLK1(2)     --------->GLK1(1)    ----------->HVH21        <---------ANAC46   tcagtaaatcacgattgaaaacaatctatatatatttttacagggtatctttggcctaaattctcttgacccggctttaattcatttgggtcgggttttg  3463400                                                                                     --------->ANAC58                                                                                     --------->ANAC58                                                                                 <---------TGA1a                                                                                 --------->ANAC55(2)                                                                                 <---------ANAC55(2)                                                                                 --------->ANAC46                               --------->MYB52(2)                                --------->ANAC58                             <---------MYB52(1)                                  --------->ANAC55(1)                            --------->TOE1(3)                                    --------->TGA1a                            --------->TOE2(3)                                    ====================                    --------->YAB1                                               ====================                  <-----------GT1       --------->ANAC58                         --------->ANAC58   <      <---------ANAC58     --------->ANAC55(2)                               <---------ALFIN1   =====      <---------ANAC58     <---------ANAC55(2)                               --------->AtMYB61  =====      <---------ANAC46    <---------TOE1(2)                                 --------->ANAC58    <----   <---------ARR14(2)     <---------TOE2(2)                                 --------->ANAC58---------   --------->ARR14(2) --------->At4g35610                                   --------->ANAC46--------- --------->LBD16 <-----------GT1        --------->ANAC46            --------->HSFB2a(2)     --------- --------LBD16 --------->AHL20(2)       --------->ANAC58            <---------HSFB2a(2)   <---------ALFIN1 ---->ZmHOX2a(2)<---------AHL20(2)      ----------->HVH21        <---------YAB1<---------ALFIN1<-----   atccggtttcgtagcaattttatcatcttacgttagatgtacacgacgcttaatttgctcaaggcttattctagagacaccacacgtatgccacaagcct  3463500                       --------->MYB52(1)                      =======================MYC_MYB                      ------->GAMYB             <-------MYC4           <-----------TGA1             ------->PIF5           <-----------HVH21             ------->MYC2          --------->ANAC58             <-------PIF5          <---------ANAC55(2)             <-------MYC3          --------->ANAC46             ------->MYC3          --------->TGA1a             ------->MYC4          --------->bZIP60(1)             <-------MYC2          <---------bZIP60(1)            ==================MYC_MYB            --------->O2           --------->bZIP60(2)            ==================MYC_MYB            --------->TGA1a        --------->ANAC58      ================bZIP_DOF     <---------O2      <----------DOF2<---------MYB52(2)      ================bZIP_DOF     --------->ANAC55(2)    ------>ZmHOX2a(1)<---------MYB55(2) ======bZIP_DOF      --------->MYB46(3)                               ---------->DOF2 ======bZIP_DOF      <---------MYB111(2)                           --------->TOE2(3) -----------GT1    ----------->RAV1(1)                         <---------MYB52(1) =====================bZIP_DOF     --------->ANAC55(1)        <---------SPL7            <----------DOF2 =====================bZIP_DOF     ==============================================bZIP_DOF ------DOF2 <---------TGA1a        --------->O2              --------->DEAR3(1)    <---------MYB52(1) >ANAC46    --------->ANAC55(2)   <-----------STF1        --------->DEAR3(1)      <---------SPL7 ---- >ANAC58    --------->ANAC46     ------->GAMYB  ----------->RAV1(2)--------->TOE1(3)    <---------DAG2 >ANAC58<-----------------PIF3(1)<---------ALFIN1      --------->AtMYB61       <---------At5g28300<-- ----DAG2   <---------O2        --------->MYB46(3)    --------->MYB46(3)     ----------->HVH21  -----   tttctcctctttccacgtgtccaacaaacagacaaccacgtcattcccatccctgaaccatcgccgttcccttaaacctctcaccgttcgcttttactcc  3463600                                                                                                    <                                                                                                    -                                                                                                   <-                                         <------ZmHOX2a(2)                                     ------                                        <---------ARR11(3)                                     ------                                        --------->ARR11(3)                                   <-------                                        --------->ARR14(2)                                <---------At4g35610    *TSS                                <---------AGP1                                    <---------ZAT2 --------->DOF5.7(2)                    <---------ARR14(2)                                --------->ZAT2 -->NtERF2                              --------->AGP1<-----------RAV1(1)                 <---------GLK1(1) -------TOE1(2)                        <---------CCA1(2)                                  --------->At4g35610 ---->DEAR3(1)             <----------DOF2------>ZmHOX2a(2)                   <XXXXXXXXXXXXXXXXXXXXMIR390A/B   gacgtttacagagactatgctcttcgttcctttctctctctagatcttaagcccaaatgttgcacaaggcttctcccgctctctctctcttgagctccgg  3463700                                                                                                  <--                                                                                                  ---              <---------ARR14(2)                                                             --------              --------->ARR14(2)                                                             --------             <---------GLK1(1)                                                          --------->RAP2.3(1)         --------->ALFIN1                                                              <---------RAP2.3(1)       <---------MYB46(3)                    --------->HSFB2a(1)                       <---------DEAR4(2)       <---------DEAR3(2)                    --------->HSFC1(2)                        <---------ORA47(2)      --------->ALFIN1                       <---------HSFB2a(1)                       <---------ATERF1(1)      <---------DREB2C(2)                   <---------ARR14(2)                         <---------ERF1      <---------DEAR3(1)                    --------->ARR14(2)                         ------>NtERF2     <---------ABI4(1)                      ------->TEIL                              <---------DEAR3(1)   --------->DEAR3(1)                       <-----------ARR10           <---------GLK1(2)  ----------  <---------LBD16                           <---------ARR11(1)        --------->LBD16 <---------RAP2.3(2) ---------ALFIN1                           <---------CCA1(2)         <-----------RAV1(2)<------NtERF2 -------->REM1(1)             <---------HSFB2a(2)                   ------>ZmHOX2a(2) --------->ATERF1(2) --------ZAT14--------->GLK1(2)      <-------TEIL                  <------ZmHOX2a(2)  <---------ATERF1(2) >NtERF2<-------GAMYB        <---------ETT(2)<---------HSFC1(2)   <---------ARR14(2)  <---------RAP2.3(3) --->LBD16   --------->GLK1(1)--------->HSFB2a(2)                 --------->ARR14(2) --------->ATERF1(1) --LBD16<------NtERF2   ------>ZmHOX2a(1)  <---------ARR14(1)  --------->ALFIN1   <-----------RAV1(2)   ctacaccggcggtggaaatctgtttcctccgtcgagaaattcgtcgaatcttctgttttctccgagtggatccaggttttctgttcaggcggcgaaagga  3463800                                                                                <----------DOF2    --------->ANAC58                                                       -------->P    --------->ANAC58                        ----------->GT1               --------->AtMYB61    --------->ANAC46                       --------->ALFIN1               <---------ALFIN1 -------MYB52(2)                          <------ZmHOX2a(1)              --------->MYB46(3) ------>MYB46(3)  --------->LBD16  <----------DOF2            <---------At4g35610 ->ANAC58       <---------LBD16   <---------DAG2   ---------->DOF2       <---------MYB52(2)     ----- ->ANAC58   --------->DOF5.7(2)  --------->HSFB2a(1)          <---------ZAT2   <---------DAG2   ----- >DOF2      <---------MYB52(1)  ------->TEIL--------->At4g35610        --------->ZAT6           -----   acgaacacgaagtcgttaaccggagttgtattcgaaccttttgaggaggtgaagaaagaaatggagctcgttcccactaccccttttgtttctctcgctc  3463900                      --------->ARR14(2)                      <---------ARR14(2)                      ------->TEIL                   <---------YAB1           ------>NtERF2                 --------->ARR11(3)          --------->DEAR3(1)             --------->AGP1          ----------->HVH21             --------->At4g35610     --------->ARR11(3)              <------ZmHOX2a(2)                                          <----     <---------ARR11(3)<---------At4g35610<------ZmHOX2a(2)                                     ----- ---->ANAC46    --------->GLK1(2)   <-----------HVH21                                           <---- ---->ANAC58   <---------GLK1(2)   ------->GAMYB           <---------ANAC58                    <----- ---->ANAC58   <---------ARR14(2) --------->MYB46(3)       <---------ANAC58                    <-----   gccacaagttctccgacgattctgaatctgccatcaacgatcagatcaagtatgttctcttgcttagttttttggtttagtctgtctctagtttttcgaa  3464000                                                                            <---------ICU4                                                                            --------->YAB1                                                                           <---------YAB1                                                                          --------->ARR11(3)                                                             <-----------ARR10                                                             --------->ARR14(2)          <---------ICU4                                                             <---------ARR11(3)      <---------YAB1                                                             --------->ARR11(3)     <-----------GT1                                                    <---------WOX13(1)   --------->YAB1  --------->YAB1    --------->HSFB2a(2)                           --------->ATHB12  --------->LBD16--------->YAB1    <---------HSFB2a(2)                         <---------WOX13(1) --------->HSFB2a(2)  --------->ICU4 -------ARR10        <---------ATHB12         --------->ATHB12     <---------HSFB2a(2)--------->YAB1 -->TEIL  <---------ICU4                     <-------TEIL   --------->RVE1(1)  <---------ICU4 -----ARR11(1) --------->ANAC58           ------>MYB83--------->ATHB12 <---------KAN4(2)<---------YAB1 ----CCA1(2)   --------->ANAC58           ------>MYB46(1)   --------->CCA1(1) <---------YAB1 ----GLK1(2)   --------->ANAC46         <---------MYB59 <---------WOX13(1)<---------ARR11(3)   tctcttctctaagaatcaccccaatcgaaaattttgaaggaaccaaattcattgattgattaatatcttcccgaatgatcatcatttatcatcatggtgc  3464100  Previous    Next  AGI:  At3g11040.1    Description:  glycosyl hydrolase family 85 protein. similar to hydrolase, acting on glycosyl bonds [Arabidopsis thaliana] (TAIR:AT5G05460.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41431.1); contains InterPro domain Glycoside hydrolase, family 85 (InterPro:IPR005201) Range:  from: 3460149    to: 3463318    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g11050.1    Description:  ATFER2 (FERRITIN 2); ferric iron binding. Identical to Ferritin-2, chloroplast precursor (FER2) [Arabidopsis Thaliana] (GB:Q9SRL5;GB:Q42288;GB:Q8L9N6;GB:Q8WHW4); similar to ATFER4 (FERRITIN 4), ferric iron binding [Arabidopsis thaliana] (TAIR:AT2G40300.1); similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96784.1); contains InterPro domain Ferritin, conserved site (InterPro:IPR014034); contains InterPro domain Ferritin-like (InterPro:IPR009040); contains InterPro domain Ferritin, N-terminal; (InterPro:IPR001519); contains InterPro domain Ferritin-related (InterPro:IPR012347); contains InterPro domain Ferritin and Dps; (Inte Range:  from: 3463604    to: 3465512    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version