Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             <---------------AtSPL3          <------------------SPL14      --------->At4g35610      <---------At4g35610                         <---------WRKY18(1)     ------>NtERF2                               ----------->HVH21    <---------DEAR3(1)                   --------->ZAT18    <---------ANAC46                     <---------ZAT18    <---------RAP2.3(2)                 --------->ALFIN1        <---------MYB59    <---------RAP2.6(2)              <-----------------------TaNAC69(2)   <---------LBD16                   --------->DAG2         ----------->HVH21                    <---  --------->ALFIN1                  --------->ZAT14         --------->WRKY45                   ------ -------->ZAT2                      ---------->DOF2         --------->WRKY12                   ------ ---------ZAT2 ------->TEIL         <---------ZAT14         --------->WRKY38(1)              <------- ---------At4g35610        --------->ARR14(2)    --------->WRKY38(1)                         -------- -------->At4g35610        <---------ARR14(2)    --------->WRKY12        <----------DOF2   ------>ZmHOX2a(1) ------>ZAT18<---------SPL7<---------GLK1(2)     --------->WRKY45        --------------------->WRI1 <   tgagctgcggctgaatgtacggacactcggattctctgtaaagtggacgcgttgaccagtctttgacccaattccctttgaagacatcgcatccttccgg  3459000                          <------NtERF2<---------AtMYB61                          --------->ATERF1(1)                         --------->LBD16                        <---------ANAC58                        <---------DEAR3(1)      <---------AtMYB61    <---------ANAC46                        <---------ANAC46    <------ZmHOX2a(1)      --------->MYB55(2)                       --------->ATERF1(1)<---------ANAC46        <---------DEAR3(1)                       <------NtERF2<---------RAP2.6(2)           <---------AtMYB61              <---                     <---------DEAR3(1)--------->ALFIN1        <---------DEAR3(1)   --------->ALFIN1       ------>MYB83  --------->ALFIN1<---------MYB46(3)     <---------ARR14(2)     <------NtERF2 <---      --------->MYB55(1)<---------ANAC58<---------MYB46(3)  ----------->HVH21    --------->ALFIN1<---     <---------MYB59 ----------->HVH21--------->ATERF1(1)  <------ZmHOX2a(1)     <---------DEAR3(1)  <-----------GT1   <-------PIF5    <---------DEAR3(1)--------->ALFIN1          <---------LBD16 <---- ------ANAC46       ------->PIF5    <---------DREB2C(2)  <---------ANAC46     --------->DAG2 <------- --->LBD16         --------->ZAT2--------->ALFIN1     <---------ANAC46    <------ZmHOX2a(1) --------- >NtERF2           --------->At4g35610<------NtERF2--------->ALFIN1<---------MYB46(3)       <-------- --LBD16     ---------->DOF2 <------ZmHOX2a(1)  --------->ALFIN1  --------->ALFIN1 --------->ATERF1(1) ->SPL7------>MYB46(1) <---------LBD16<-------GAMYB<---------AtMYB61 --------->ALFIN1 <------ZmHOX2a(1) ----------DOF2  <-----------RAV1(2)<---------ANAC46<---------MYB46(3)  <---------ANAC46 <------ZmHOX2a(1)   cgttttacctactgcaaaagcaggtggcggaggagatggcggtggaggagatggtggtggaggagacggtggtggaggagaaggcggaggaggagatgtt  3459100              <---------ARR14(2)            <---------HSFC1(2)        --------->ALFIN1       <------NtERF2       --------->ATERF1(1)                 <------MYB46(1)     <---------DEAR3(1)                    <------MYB83     <---------ANAC46                     --------->ALFIN1     --------->ALFIN1                     <---------MYB46(3)    <------NtERF2  <---------WRKY12      <---------WOX13(1)    --------->ATERF1(1)                 <---------ARR14(2)  <---------DEAR3(1)                    --------->ARR14(2) --------->ATERF1(1)                  --------->LBD16           --------->ZAT14 ------MYB46(3)<-------TEIL          <---------ANAC58     <------NtERF2 ---MYB46(1)--------->HSFC1(2)       <---------ANAC58   <---------DEAR3(1) ---MYB83   <---------HSFB2a(1)      <---------ANAC46------>ZmHOX2a(2) -----AtMYB61 --------->ARR14(2)--------->ATHB12    <------ZmHOX2a(2) ----RAV1(1)--------->HSFB2a(1)<---------YAB1      --------->ARR14(2)                 --------->CCA1(2) >ARR11(3) <---------------AtSPL3   <---------LBD16<---------ARR14(2)  <------ZmHOX2a(2) -ARR11(3)<------ZmHOX2a(1)  ------->GAMYB<---------AtMYB61     <---------ZAT14  ---------->DOF2 ----   ggtggaggcggaggaggttcgtcaactacaacgacgattgcggattggtggacgatcgtcggagagtgaagagatcgacgagagaaagagatgaaatcgt  3459200                      --------->At4g35610               <---------ANAC46              --------->ATERF1(1)              <------NtERF2             ------>NtERF2             <---------ORA47(2)             <---------ATERF1(1)             <---------RAP2.3(1)             <---------ERF1             <---------DEAR4(2)      ----------->GT1                                            <----            <---------RAP2.3(2)    <---------ZAT14                               --------->At5g28300            <---------RAP2.6(2)    --------->ZAT14            <---------ANAC46  ----------->GT1<-----            <---------RAP2.3(3)    --------->ZAT18           <------NtERF2     <---------DEAR3(1)            <---------DEAR3(1)     --------->SPL7   --------->ALFIN1      <---------MYB52(1)------->GAMYB           --------->ATERF1(1) <---------------AtSPL8   ----------->HVH21<-------GAMYB     --------->DEAR3(1)      <---------REM1(1)   ---------->DOF2         --------->ALFIN1     <---------TOE2(3)   --------->ANAC46 -------------->SPL14 <---------At4g35610   >>>>>>>>>TBF1  <---------DEAR3(1) <---------------------WRI1   ggccgtagatgaaggcggcgagtaagatgaaagcgagtacggtgaagaagaagtgtgtgagacggcgttttctacggttagacggtgaaaacaacgccgt  3459300                              --------->WRKY12                             --------->DOF5.7(2)                                      *TSS                            --------->TOE2(3)             --------->ANAC58            --------->YAB1                          <---------TOE2(3)             <-----------GT1       <---------ZAT14                       <---------AHL20(2)        ---------->ID1     --------------->AGL15                      --------->YAB1         ----------------------->TaNAC69(2)   --------->ICU4                     <---------YAB1<----------DOF2  <----------DOF2 <---------------AGL15                  <---------AHL20(2)         <----------DOF2  <----------DOF2 --------->ZAT14      <---------AHL20(2) <-----------GT1   ---------->ID1 --------->ANAC58   <---------REM1(1)  <---- -----MYB52(1)    --------->AHL20(2)      <-----------GT1 --------->ANAC46   <---------ANAC46   <---- --GAMYB        <----------DOF2   <---------DAG2 <-----------GT1    <----------DOF2<---------ICU4<<<<   tgtcatatttttttttttcttttattataacgtttacctttttttttctttttcctttttacgcctttctctttttatggtgtagtaatgacaaaatttg  3459400                                   --------->YAB1                                  <---------YAB1                                <--------HAHB4                                <---------ICU4                       <---------ARR14(2)                       --------->ARR14(2)                       --------->ZAT18                       <---------ZAT14                       --------->ZAT14                                                              -                    <---------ANAC46        <---------YAB1      ---------->DOF2             <------ZmHOX2a(2)          --------->TOE2(3)     --------->ATHB51     --------->ICU4                        --------->ARR14(2) --MYB83  <----------DOF2       -------->ATHB1      <---------TOE2(3)                    --------->ANAC58 --MYB46(1) <---------AHL20(2)  --------->YAB1   --------->AHL20(2)           --------------->AtSPL8< <<<<<<MYB80--------->AHL20(2) --------->ICU4    <---------AHL20(2)    <---------YAB1    --------->ANAC58   gtttgattaaaactttaatttggagtatactgaattattatagtatatgattttaatgtttataaacaaagctataatttgttgtacttgcacgatccaa  3459500                                                                                    <---------CCA1(2)                     --------->ATHB51                                           <---------ANAC58            <---------ANAC58  --------->ANAC58                                  <---------ANAC58            <---------ANAC58  --------->ANAC58                                  <---------ANAC46  ------>MYB83       <--------HAHB4          <---------AHL20(2)              <---------MYB52(1)  ------>MYB46(1)    <---------ICU4          <---------YAB1                 <-------GAMYB -------->AtMYB61   --------->ICU4          <---------AHL20(2)             <---------ANAC58   ------- ---------MYB59     <---------ATHB12        --------->AHL20(2)             <---------ANAC58<---------ATHB12   aaccaaacccatgttcttgcccataattaagcacgactgtttatattttaattcaaacttacaaaattggaacaatttcgttgcttgtatccaatgaact  3459600                                                                   --------->ANAC58                                                                 ---------->DOF2                                                              --------->ANAC58<----------DOF2                                                              --------->ANAC58<---------DAG2                                                          --------->ANAC58--------->ZAT14                                                    ---------->DOF2--------->ANAC58                                   <---------At5g28300    --------->ANAC58<---------ZAT14 >TEIL              --------->GLK1(1)  ----------->GT1  ---------->DOF2   <---------ZAT18   tatctatctccaaattagtctgaattccaatttggattacggtgttataaaacaaaaagaaagcaagaaaagccactacactttttgctaatcacatgtt  3459700                                                                                                   --                                                                                                   --                                                                           ---------->DOF2         <-                                                                          <---------ATHB12        ---                                                                     <------ZmHOX2a(2)            ---                    --------->YAB1                                  --------->AGP1                ---            <------ZmHOX2a(2)                                       --------->ARR14(2)            ===          <------ZmHOX2a(1)   <----------DOF2                       <---------ARR14(2)    <---------DAG2      ---------->DOF2      <-----------GT1                         --------->At4g35610    <----------DOF2  <----------DOF2--------->YAB1            ---------->DOF2   <---------AHL20(2)    --------->GLK1(2)   tgaacttttaaaggatcaacaataacatttaactttgtttgtattcaaaggccttataagcattttatcagatccaataaagaagaatccaacttttcat  3459800                --------->ANAC46   <-----------ARR10                --------->ANAC58   --------->AHL20(1)         --------->YAB1            --------->ARR11(3)     <---------ICU4                <---------ARR11(3)             <---------DAG2 ------->TOE2(3)--------->ANAC58  --------->CCA1(1)  <---------ANAC58 ------------->AGL15              --------->RVE1(1)  <---------ANAC46      --------->AHL20(2) --------------AGL15          <---------AHL20(2)     <---------ANAC58 ----------->TBP -------------->AG            --------->AHL20(2)  <----------DOF2 <----------DOF2     <-----------HVH21 -------------->AGL2 --------->ANAC58    <---------CCA1(2)        --------------->AGL15 -------------->AGL1 --------->ANAC58  <---------CCA1(2)       <-----------GT1     <------------CBF =================================================================================MADS_MADS  <-------   gccttaatcagtaatcacaggccaaggcccatataaatatcttatctctctgctttcgtgtaagtttactttataaaaaaaatgaaattgtcatgtcgtt  3459900  Previous    Next  AGI:  At3g11030.1    Description:  steroid hormone receptor/ transcription factor. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G40320.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41435.1); contains InterPro domain Protein of unknown function DUF231, plant (InterPro:IPR004253) Range:  from: 3457233    to: 3459386    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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