Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         <--------ATHB1       --------->ATHB51       <---------ICU4       -------->ATHB1       --------->ATHB12      <---------ATHB51      --------->ICU4      <<<<<<<<<<AGL22                      <----------DOF2      <<<<<<<<<<AGL24             <-----------GT1      <<<<<<<<<<AGL20          <---------AHL20(2)<---------ANAC58      <---------ATHB12        --------->AHL20(2) <---------ANAC58                 ---------->DOF2      <---------YAB1     <---------YAB1 --------->GLK1(2)  --------->YAB1    XXXXXXXXXXXXXXXXXXXXX>MIR2936 ->LBD16            <------ZmHOX2a(1)  <---------GLK1(2)<xxxxxxxxxxxxxxxxsmallRNA(i)   <----------ID1   tcatcccaattattgacaaggaggattatcaattttataccgattctttttgcttcggctatcacaaaatccaaacccttgaaaaaaagaagacaaacta  3411700                                                                                               ------                              --------->DAG2           <---------MYB46(3)     <---------MYB46(3)                     <---------TOE2(3)        ----------->HVH21               <----------DOF2  <-----                <---------AHL20(2)           --------->TOE1(3)     <------ZmHOX2a(1)          <xxxxxx           >>>>>>>>>MYB98    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<---------TOE1(2)           --------       ----------->GT1      ---------->DOF2  --------->TOE2(3)   <---------TOE2(2)        --------->ZAT18      --------->DAG2 <---------TOE1(3)      ----------->RAV1(2)--------->TOE1(2)        --------->ZAT18     ---------->DOF2 --------->MYB59       -------->P<---------MYB52(1)<-----------RAV1(2)<---------ZAT18   attaacaaaaagtaacatatatttaggttgaaaaggcttcacacttacctgaaacgtttgttcatcgtaggaaccaggggctgtttggagagcgcggtat  3411800                        <---------ANAC46                        <---------ANAC58                        --------->ATERF1(1)                     <-------PIF5                    <---------ZAT2                    --------->TGA1a              --------->MYB46(3)            <---------ARR14(2)          --------->LBD16                                                                          --         --------->ANAC55(2)                                                                       <-         <---------ANAC55(2)<---------DEAR3(1)                                                     <-         --------->ANAC46 ------>NtERF2                                                            <-        <---------LBD16 <---------ANAC58                                                           --    --------->DEAR3(1) <-------TEIL                                                                <-    <---------ALFIN1--------->ZAT2                                                            ------>ZmHOX2a(2)   --------->ATERF1(1)--------->ALFIN1                                                       <------ZmHOX2a(2)   <------NtERF2  <-----------RAV1(2)                                                    --------->ETT(1)  <---------RAP2.3(1)------->PIF5                                                    <---------AtMYB61  ------>NtERF2   <---------ALFIN1                  <---------ANAC58           --------->ARR11(3)<--- --->ARR14(2)<---------GLK1(1)                      <---------ANAC46          <---------CCA1(2) <---- ----ARR14(2)--------->GLK1(1)     <---------WRKY38(1)                    ------>ZmHOX2a(2) <-------- xxxxxxxxxxxxxxxxsmallRNA(si3)    --------->WRKY18(1)                   <---------ARR11(3)  --------- ->At5g28300--------->ARR14(2) <---------AtMYB61    <---------ANAC58    --------->ARR11(3)<---------DEAR3(2)   atggcgccatcgcggaacccccaggtgcgggcgatggtcaaaccgagactagttgcgttttgaaacacattagtgatcttaaatcttgtggtcggatcgg  3411900       --------->ANAC46       --------->ANAC58      --------->SPL7    <---------SPL7  <-------TEIL                                                             <---------ARR14(2)  <----- ------->At4g35610                                                    ------>NtERF2 --------->ANAC58 --------At4g35610                                                   --------->ANAC58      <--------- --------HSFB2a(1)                                           --------->AHL20(1)     <---------MYB52(2) --------ZAT2                                                <---------AHL20(1)     --------->ANAC46 ------->HSFC1(2)   --------->ICU4  <---------ANAC46         --------->AHL20(2)     --------->ANAC58 --------HSFC1(2)  --------->ANAC58 <---------ANAC58         <---------AHL20(2)<---------At4g35610 -----P--------->ANAC58  ---------->DOF2                    --------->AHL20(2) --------->At4g35610 -----MYB52(1)     --------->ANAC58 <---------ANAC58   --------->YAB1--------->ANAC58     --------->ANAC46 -ARR14(2) --------->ANAC58         ----------->GT1<---------------AGL15   --------->ARR14(2)  ------ >ARR14(2) --------->ANAC58        <-----------------------TaNAC69(2)--------->ANAC46  ------->TEIL   tagcttcgtacgcgagccagtaagcattgaagccattagcgtaaaatggtttcccatttagaataaattggacgccatttctgctcacgaacccatcact  3412000    --------->HSFB2a(1)    --------->At4g35610    --------->HSFC1(2)    <---------HSFC1(2)    <---------ZAT2    <---------At4g35610                                                                 <----------DOF2    --------->ZAT2               --------->YAB1       ---------->DOF2                  <-------------  <------NtERF2             <---------ZAT18       --------->ANAC58                  <----------DOF2 ----O2                <----------DOF2      ---------->DOF2     <---------ALFIN1 <-----------GT1 --HVH21       ------>ZmHOX2a(1)<------ZmHOX2a(2) ----------->GT1           <----------DOF2 ----->RAV1(2) ========================HOX2a_HOX2a--------->ANAC58      <---------GLK1(2)   tggcgcagcttctactcctacatagctttgtgcgatcacaatcgctaaaagcacgataaaacacaaacacttcatattcttttctactttctttttgttt  3412100                                                          <------------CBF                                                         --------->ATHB51                                                         <---------ICU4                                                        <---------YAB1                             --------->AHL20(2)       --------->YAB1                             <-----------TBP<---------ANAC58                                        <                             <---------AHL20(2)      --------------->AGL15                      -----                           <-----------TBP  --------->ANAC55(2)                                 <----                           <---------AHL20(2)        <---------------AGL15                  <--------                           --------->AHL20(2)    <----------DOF2                           <---------ANAC46 <---------ZAT18         <-----------TBP    <---------ANAC58 ------------>CBF              <---------ANAC58 -----------ANAC81   ----------->GT1        <---------ANAC55(2)      --------->AtLEC2      <---------ANAC58   ttgtgctcttatcgttttccaacgagtatatatatatagagggcatacgtgctttcttataattgcaatgcatgcatataaacattcactaattcgtgga  3412200             --------->O2             <---------ANAC58             --------->ANAC55(2)             <---------O2             --------->TGA1a             <---------ANAC58             <---------TGA1a             --------->ANAC46           --------->ANAC58           --------->ANAC46                                                               --------->YAB1           --------->ANAC58                          <---------ICU4                   --------->ZAT6     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)           <--------ATHB1                  ------------>CBF    --------->ATHB51                                --------->ICU4                  --------->MYB52(1)    <--------HAHB4                                  <---------ATHB12              <---------MYB52(2)    <---------ICU4                          --------------->AtSPL8              <-----------GT1   --------->ICU4                        <---------YAB1 <---------ICU4     --------->AHL20(2)   <---------YAB1        ----------->GT1 ------------>CBF                  --------->AHL20(1) --------->YAB1       --------->TOE2(3) --------->TOE2(3)                  <---------AHL20(1) ---------YAB1       <-------TEIL      --------->YAB1--------->YAB1        <---------ARR11(3)      <- ---->ARR14(2) ----------->HVH21      <---------ATHB12 --------->ICU4 <------ZmHOX2a(2)   <--------ATHB1 -----ARR14(2)<-----------HVH21       --------->ICU4<---------ATHB51 <---------ARR11(3)  <---------ATHB51 -LBD16    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ------------>CBF     --------->ARR11(3)--------->YAB1   ttttcataattacacgcgtgacatccatagtaaataagaaatcatcaatgtacaataattcttacatataagatcaaaatattaactaacaataatacat  3412300                                                                                <---------AHL20(2)                                                                                --------->AHL20(2)                                                                                --------->AHL20(1)                 <---------AHL20(2)                                          <---------AHL20(2)                 --------->AHL20(2)                                          --------->AHL20(2)             <---------YAB1                                                 --------->AHL20(2)           --------->YAB1                         <---------AHL20(2)        <---------AHL20(2)          <---------YAB1                         <---------AHL20(1)       --------->TOE2(3)        <---------ICU4                           --------->AHL20(1)      --------->YAB1        --------->YAB1                      --------->YAB1               <--------HAHB4       <---------YAB1                       --------->AHL20(2)          <---------YAB1       --------->ICU4            <----------ID1--------->AHL20(1)      <---------ARR11(1)   ---------     --------->YAB1         --------->YAB1 <---------YAB1             <---------ARR14(1)   <---------AHL20(1)     <---------ICU4       ------------>CBF--------->AHL20(1)          <---------CCA1(2)    --------->AHL20(1)    <---------YAB1        ------>MYB46(1) <---------AHL20(2)      <---------At5g28300--------->YAB1 <---------AHL20(2)       ------>MYB83    --------->AHL20(2)   --------->ARR11(3)    ----------->GT1 --------->AHL20(2)  <-----------GT1     --------->YAB1        <---------ARR11(3)<---------AHL20(2) ---------DOF2--------->ATHB12 --------->YAB1  <---------AHL20(1)<-----------GT1<---------AHL20(1)   tcttttattattattatgatttattacctacaataagaacaaattataatatatatttgagagaatatcaccgtatcattaatttaatagtaatatataa  3412400                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    <                                                                                                    <                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                                 ----                                                                                                <----                                              <---------ICU4                                  -------                                              --------->YAB1                               --------->YAB1                                             <---------ATHB12                           <---------ICU4                                   <---------ARR11(3)                                   --------->YAB1                 <-----------GT1   <-----------GT1                                     <---------AHL20(2)                --------->AHL20(2) --------->ARR11(3)                               <---------AHL20(2)                <---------AHL20(2)--------->YAB1      --------->At4g35610          <---------AHL20(2) >CCA1(2)   --------->ICU4 ----------->GT1------>ZmHOX2a(1)  --------->ATHB12      --------->AHL20(2)   gttttttttttgtaatatttaactagaagttgttaattatcttcctaatcaatatgagcttagtaattgggcctatttgatcaaattaaataataacaat  3412500 ---------ICU4 -------->ATHB12                        ---------->ID1 -------->ATHB51             --------->YAB1 ------->HAHB4               <--------HAHB4 ------------ATHB5           <---------ICU4 --------ATHB1              <---------ATHB12 ------->ICU4               --------->ICU4 --------ATHB51             <---------YAB1                                              <-----------RAV1(1) --------YAB1      <---------YAB1   --------------------->WRI1                   --------->ARR11(3) ----->YAB1     <---------YAB1    <---------YAB1                               --------->ICU4 -----ATHB51   <---------AHL20(2)--------->ARR11(3)                       ----------->GT1 -->YAB1     <---------AHL20(2)  <---------ARR11(3)                 ---------->DOF2--------->YAB1   aataattgggcctatatttttattcttgtaatcattatctttgttctcttccccttgatatatgaattagcaaagtaagtaaaaatcatgttgttgcata  3412600  Previous    Next  AGI:  At3g10900.1    Description:  (1-4)-beta-mannan endohydrolase, putative. Identical to Putative mannan endo-1,4-beta-mannosidase 4 precursor (MAN4) [Arabidopsis Thaliana] (GB:Q9SG95); similar to (1-4)-beta-mannan endohydrolase family [Arabidopsis thaliana] (TAIR:AT3G30540.1); similar to hypothetical protein [Thellungiella halophila] (GB:ABB45852.1); contains InterPro domain Glycoside hydrolase, family 5; (InterPro:IPR001547); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781) Range:  from: 3410257    to: 3412075    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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