Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  ----------->GT1                                                                                --------->LBD16                      <---------YAB1                                           --------->LBD16                   <---------YAB1                                              --------->ANAC46                   --------->ICU4                                              --------->ANAC58                 --------->YAB1                                                --------->ANAC58                <---------YAB1                                                <---------LBD16             --------->ICU4                  --------->LBD16               <---------ALFIN1        ----------->GT1  <-----------GT1     <---------At4g35610        <-----------GT1     ---------->DOF2 --------->AHL20(2) <---------ANAC58            --------->AHL20(2) ------>ATHB12--------->YAB1            <---------ANAC58            <---------AHL20(2)            <-- ------YAB1  <---------YAB1       <----------DOF2                 <----------DOF2       --------->AHL20(2)   ttattgacaaaggtgattatcatttttataccgagtctttttgcttccgctatcgcaaaatccaaaccctttaatttccacccggaaaaatttaagagtt  3408600                                                                        --------->TOE1(3)                                                                        --------->TOE2(3)                                                                       ----------->RAV1(2)                                                                      -------->P                                                                  ------>MYB83                                                                  ------>MYB46(1)                     --------->AHL20(2)                         <---------MYB59                <---------YAB1          <---------At4g35610   --------->ARR11(3)          <---------AHL20(2)            --------->At4g35610   <---------ARR11(3)                  <-- --------ID1 --------->ICU4   <-------TEIL                ---------->DOF2   ---------->DOF2    ------   aagacaaactaattcattatcaatataaaacatacatttttgagctgtttctctctatattaaagacctacttacctgaaaagttttttcatcgtagaca  3408700                                     --------->GLK1(1)                                     <---------GLK1(1)                                    <---------ARR14(2)                                    --------->ARR14(2)                                  --------->LBD16                            --------->DEAR3(1)                           <------NtERF2                          ------>NtERF2 --------->ANAC46                          <---------RAP2.6(3)                         >>>>>>>>>AtERF-1                         --------->DEAR3(1)                         --------->RAP2.6(2)                         >>>>>>>>>AtERF-3                         >>>>>>>>>AtERF-5                         >>>>>>>>>AtERF-4                         --------->ANAC46                         >>>>>>>>>AtERF-2          --------->SPL7                         --------->RAP2.3(2)      ------>NtERF2                         --------->RAP2.3(3)    <---------ANAC58                        --------->ATERF1(1)     <---------ANAC58                        --------->MYB46(3)     <---------ZAT18                        --------->ERF1--------->MYB46(3)                        --------->RAP2.3(1)    --------->ZAT18                       --------->At4g35610    --------->ALFIN1                       <---------At4g35610  --------->TGA1a                       <---------ATERF1(1)<---------ALFIN1                     <--------P  <---------ANAC55(2)       <---------WRKY38(1)                     =================================MYC_MYB                 <---------ZAT18 --------->ANAC55(2)    ----------->GT1<---------MYB46(3)         --- ---------RAV1(2)--------->ZAT18 --------->ANAC46<---------SPL7        --------->ATHB12         <---- --->ANAC46    --------->ZAT18  <---------LBD16<---------LBD16    <---------YAB1                -----   ccaggggcaatttggagagcgcggtagccgccatcgcggaacccccaagtgcggacgatggtcaaatcgtgaatggttgcattttgaaacacataagtga  3408800                               --------->ANAC46                               --------->ANAC58                               --------->ANAC58                              --------->SPL7                        <---------ANAC58                        <---------ANAC58                        <---------ANAC46                       <------NtERF2                      --------->ABI4(2)                     ----------->GT1                     <----                      <---------MYB46(3)                    <---------ANAC46                  ------>NtERF2         <---------AtMYB61  <---------SPL7                  <---------ANAC58       <---------KAN4(2) --->ZmHOX2a(2)       ------>NtERF2              ---------->DOF2                <---------TOE2(3)<--- -----ARR11(3)  --------->ARR14(2) --------->ANAC58         <---------ANAC58   --------->YAB1-------- ---->ARR11(3)  <---------ARR14(2) --------->ANAC58        <-----------------------TaNAC69(2)--------   tcttaaaccttgtggtcgaatcggtggcttcgtacgcgagccagtaggcattgaagccattagcgtaaaatggtttcccattgagaataaactggacgcc  3408900                                       --------->HSFB2a(2)                                       ------>ZmHOX2a(1)                                       ==============================HOX2a_HOX2a                             --------->ARR14(2)                      ----------->GT1                             <---------GLK1(2)                    <---------ICU4        --------->ANAC46     --------->ARR11(3)                   <---------GLK1(2)        --------->ANAC58     <---------ARR14(2)                --------->YAB1        --------->ANAC58--------->ANAC46               <---------ANAC58         --------->ANAC58 -----DAG2           ----------->HVH21 <---------HSFB2a(2)<---------ZAT18       --------->ANAC46 -------DOF2   <-----------HVH21 <-----------GT1       <---------ANAC46         <----------ID1 ->ANAC58  --------->ANAC58  <---------ARR11(3)        <---------ANAC58   ---------->DOF2     <------ ->ANAC58  --------->ANAC58<---------TOE2(2)------>ZmHOX2a(2) <------ZmHOX2a(2) --------->ANAC58   ttttctactcacgaagccatcactcgacgcagattttactcctagatcgctagagttttgtgcgatcagaattgctaaaagcacgacaaaacacaaacac  3409000                                                               <xxxxxxxxxxxxxxxxsmallRNA(le3)                                                             <---------AHL20(2)                 <------------------------ANAC81             <-----------TBP                 --------      <----------DOF2                                        --------->AHL20(2)           <----------      ------>ZmHOX2a(1)                                    --------->AHL20(2)           <---------YAB1  --------->ARR14(2)                                       ----------->TBP             ------------>CBF  <---------ARR14(2)                                      <---------ARR11(3)     <----------DOF2 <---------CCA1(2)                                        --------->ARR11(3)    <---------ANAC58 ---ALFIN1    <----------DOF2  <---------ZAT18            <---------AHL20(1)    <---------ANAC58   <-   ttcatatccttttctactttgtttttgtttttgtgctcttatcgttttcatttcaacgaatatatatatagaaggcataagtgctttcttacaattgcaa  3409100                                      <-------MYC2                                      ------->MYC2                                     --------->TGA1a                                     <---------O2                                     --------->ANAC58                                     --------->bZIP60(2)                                     <---------TGA1a                                     --------->O2                                     --------->ANAC46                                     --------->ANAC55(1)                     <---------ICU4                                     --------->ANAC58                       --------->ICU4                                     --------->ANAC55(2)                  <---------ICU4                                     <---------ANAC55(2)                  --------->ATHB51                              <---------YAB1                              --------->YAB1                            <---------ICU4                                <--------ATHB1                            <--------HAHB4           --------->CCA1(2)    --------->AHL20(2)                           --------->ICU4     --------->TOE2(3)           <---------AHL20(1)                           <---------YAB1     --------->YAB1      --------->AHL20(2)                    --------->ARR14(2)------->MYC3  --------->AHL20(1)   <---------ATHB12     <------               <---------ANAC58 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    <---------ATHB51     -------     <---------KAN4(1)   --------->YAB1----------->HVH21       --------->AHL20(2)            --------    ------->TEIL    <---------ARR14(2)<-------MYC3  <---------AHL20(1)   --------->ICU4     <-------- ---->CBF      <---------ANAC58--------->AHL20(2)--------->AHL20(2)  ------------>CBF    --------->ICU4 --CBF--------->KAN4(2) <---------YAB1<-----------HVH21       <---------AHL20(2)       ----------->GT1 --------AtLEC2<---------ANAC46--------->YAB1<-------TEIL     --------->AHL20(2)<-----------GT1    --   tgcatgaacattctaagtcgtggattttcataattatacacgtgacatccataatatataagaaataaataaacaataatttttacatatagttattaaa  3409200          <---------ICU4          --------->YAB1         --------->ICU4         <---------YAB1       <--------HAHB4       --------->ATHB51       <---------ICU4                                   <----------DOF2       --------->YAB1                                  --------------->AGL15      <---------YAB1                                   <---------------AGL15      <---------ATHB51                                <-----------------AGL1  ------------>CBF                                  <-----------GT1 ---AHL20(2) <-----------GT1                      --------->ARR11(3)                                < -->AHL20(2)<---------YAB1               <---------AHL20(2)                         <---------AHL20(2) ->YAB1-------->ATHB1              --------->YAB1 <---------ARR11(3)             <---------ICU4    -- -YAB1--------->ICU4          ------------>CBF <---------GLK1(2)   ----------->GT1<----------DOF2 <-- ------->AHL20(2)        ---------->DOF2<-----------TBP<---------DAG2           --------->ICU4   <---   ataaaacaattattattacaacacataaaaagaacaattagaatttatagaatatcaccttttatggtctagttattttgtaatctttatttgaaaaccg  3409300            <---------YAB1         <---------ARR11(3)  --------->WRKY38(1)              --------->ARR11(3) <---------WOX13(1)   <---------WRKY12 ------------CBF      <---------WRKY45                                                  ----------->GT1 ------->ATHB12       <---------WRKY38(1)     <---------ICU4--------->TOE2(3)        ---------------- -----TEIL<----------DOF2     <---------YAB1 <---------ATHB12     <---------AHL20(2) <----------DOF2 ------MYB52(1)      --------->WRKY18(1)  ------>ZmHOX2a(1) --------->YAB1    <-----------GT1 <------   ttcattgactaactttcattgtggtcaacatgttgattatcttcctaatcaatactggctaaccatatttattcttctaatgaccttctttggttatttc  3409400                        --------->ATHB12                       <---------YAB1                ------>MYB46(1)                                               <---------ARR11(3)                ------>MYB83                                                  <-----------GT1        --------->WOX13(1)                                           <---------At4g35610    <---------GLK1(1)  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)          --------->At4g35610 ----->WRI1   <---------MYB111(2)                                  <--------P --------->ARR11(3) -----GT1     <---------MYB46(2)         ------>NtERF2           <---------MYB46(3)         ---------   cccttgaaatcagtcaccaaactatatgatttgtttccctcgatgcctctctaatttcaaaattcagtggtagctcaaattatcttcttaatttcaaaga  3409500  Previous    Next  AGI:  At3g10890.1    Description:  (1-4)-beta-mannan endohydrolase, putative. Identical to Mannan endo-1,4-beta-mannosidase 3 precursor (MAN3) [Arabidopsis Thaliana] (GB:Q9SG94); similar to (1-4)-beta-mannan endohydrolase, putative [Arabidopsis thaliana] (TAIR:AT3G10900.1); similar to hypothetical protein [Thellungiella halophila] (GB:ABB45852.1); contains InterPro domain Glycoside hydrolase, family 5; (InterPro:IPR001547); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781) Range:  from: 3407460    to: 3409005    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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