Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   <---------ARR11(3)                                 --------->AHL20(1)                                 --------->ARR11(3)                                <---------AHL20(2)              --------->ARR14(2)                              <---------AHL20(2)                <---------GLK1(2)                          <---------AHL20(2)            --------->YAB1                          --------->AHL20(2)            <---------ICU4                        --------->AHL20(2)              --------->ATHB12                        <---------AHL20(2)              -------->ATHB1                      --------->AHL20(2)                <--------ATHB1                    --------->AHL20(2)                  <------------ATHB5                    <---------AHL20(2)                 <---------ATHB12           <---------At4g35610--------->AHL20(2)       --------->ICU4          <---------TOE1(3) <---------AHL20(2)       --------->WOX13(1)   <---------MYB52(1) <---------AHL20(2)            ------------>ATHB5 ---->ARR11(3)    --------->AHL20(2)           <------------MYB.PH3(1) -----ARR11(3)    <---------AHL20(2)         <-----------GT1    <---------ARR14(2) ->DOF2   <---------TOE2(3) --------->AHL20(2)<---------At5g28300   tcttcgtgagttaagcttatatatatatatatatatatattcgtttataaccgttcaatcattgtggattctctattagcattcaatagttgttttatat  3405400                         <----------DOF2                                      --------->WOX13(1)                     --------->ZAT14                                        <---------YAB1                     <---------ZAT14                                  ------>ZmHOX2a(2)                     <---------ZAT18                                 <------ZmHOX2a(2)                     --------->ZAT18                                --------->AGP1                     <-------TEIL<---------AHL20(1)                 --------->ARR11(3)                  <---------ANAC55(2)      --------->AHL20(2)       >>>>>>>>>GATA-1                  <---------ANAC58         <---------AHL20(2)       <---------ARR11(3)                  <---------ANAC46     <---------AHL20(2)           >>>>>>>>>GATA-3                  <---------ANAC55(1) <---------AHL20(2)            >>>>>>>>>GATA-2          --------->ANAC58       <---------AHL20(2)                 >>>>>>>>>GATA-4    ---------->DOF2          --------->ANAC58       --------->AHL20(2)                --------->GLK1(1) <---------ATHB12   --------->YAB1 <---------ANAC58<---------AHL20(2)    ---------->DOF2   --------->YAB1     --------   atgtagcataaaacgctaatacgtgcactttctaattttttttatttatataagaatataaagtttaagagatctattatcattcaaatcaaagaaaaag  3405500                              ------>ZmHOX2a(2)                        ----------->RAV1(2)                                              --------->ARR11(3)                      <-----------GT1                   --------->AHL20(2)<---------AHL20(1)              <---------ARR14(2)          <----------DOF2  --------->ARR11(3)           <---------CCA1(2)              --------->ARR14(2)------>ZmHOX2a(1)   <---------YAB1     <---------AHL20(2)<---------ARR11(3)           <---------ANAC46 --------->ARR14(2)  <---------YAB1 ------>ZmHOX2a(1)<---------AtMYB61 <-- -->DOF2 --------->MYB52(1) <---------ARR14(2)<---------AHL20(2)     <---------YAB1   ------>ZmHOX2a(1)   aatgtgaaggctaccgtatatgtgtaacctgatcctgtctcattctttttatttttgataaaatcctgtttattaatatgttttggtcctaaatcttcat  3405600                                                                 --------->At4g35610                                                                 <---------ZAT2                                                                 --------->ZAT2                                                                 <---------At4g35610                                                     --------->AHL20(2)                     ---------                             ---------->DOF2 --------->ANAC58 <---------MYB52(1)            ---------                     --------->DOF5.7(2)     ----------->GT1 <-----------TGA1               ---------               <---------MYB59    ---------->DOF2--------->AHL20(2)              <-------GAMYB  <---------AHL20(2)--------->TOE1(3)        --------->ANAC58<-----------HVH21  <---------MYB46(3)  <---------YAB1    --------->TOE2(3)   <----------ID1--------->YAB1         <-----------RAV1(1)   -- -------AHL20(2)    <----------DOF2 ------------------------>ANAC81<----------DOF2 <---------MYB46(3)   tttttttattgaacatgcctaactttaaccaaaaagaaaaggaagacaagaaaaaataaaaatcgtcagctttggaaatatgtggttgtgagaaacgcaa  3405700                                                                                               ------                                                    <----------DOF2                            ------                                       --------->ZAT14                                         ------                                       ---------->DOF2 <---------ARR11(3)          <----------DOF2 >ANAC46                       --------->ANAC58   --------->ZAT18                  <---------DAG2---- >ANAC58           ----------->GT1 --------->ZAT6 <---------ZAT18         <---------TOE1(3)<---------HSFB2a(2) >ANAC58       --------->DAG2  --------->ANAC58   <-------TEIL            <---------TOE2(3)--------->HSFB2a(2) --------->GT1---------->DOF2--------->ANAC46---------->DOF2<----------DOF2     <-----------GT1------   ttggataaaaaatgaataaagtcgataatacacacgaacactaaagtcaaagtgcattatctcttttttgttttttagggttttactttttttctacaag  3405800                                                                             ------->TEIL                                                                             --------->SPL7                                                                          --------->ANAC58                                                                          --------->ANAC58                                                                          <---------ANAC55(2)                                                 --------->RVE1(1)        --------->ANAC55(2)                                                --------->GLK1(2)         --------->ANAC55(1) ----->GT1---------->DOF2                       <---------ARR11(3)        --------->ANAC46    ------- --->ANAC58                                     --------->ARR11(3)       --------------->AtSPL8 --->ANAC46         *TSS                        <-----------ARR10        --------------->AtSPL3 ----->AHL20(2) ----------------------->TaNAC69(2)             ------>ZmHOX2a(1)--------->ANAC46 --->ANAC58  ---------->DOF2  <-----------HVH21<---------GLK1(2)   --------->YAB1           <--------   taaatttgaatccaaagaagcgccattttctatgtcactgtgcctcacaaaatctctccaacttcctcatcgtaacacgtacccctaatttcaaaatcat  3405900                                   ===================HOX2a_HOX2a                                   ------>ZmHOX2a(2)                                  ====================HOX2a_HOX2a                                  <------ZmHOX2a(2)                                 --------->ARR14(3)                                 <-----------ARR10                                 --------->AGP1                                 <---------AGP1                                 <---------ARR14(2)                                 <---------ARR14(3)                                 --------->ARR14(2)                                 <---------ARR11(3)                   --------->ARR11(3)                                      --------->GLK1(2)                   <---------ARR11(3)          ------>ZmHOX2a(1)          --------->YAB1 -->YAB1          <---------At4g35610      <-----------GT1               <---------ATHB12 -ARR11(3)    <-----------HVH21  --------->ARR11(3)              <-----------RAV1(2)   cttcatactattcccctgtaagctcttaatcgacagatcttggtttctcctctcaacaaaatcaagtccaggtcaataatctttctctctctctctctca  3406000                        <----------DOF2                        --------->MYB59            <---------LBD16                                    <---------TOE1(3)         <---------ARR14(2) <---------TOE2(3)                  <---------TOE2(3)         --------->ARR14(2) <---------TOE1(3)             <------------------------ANAC81           <   ctgaattcaagtattcggggtctctgatttagggtttataaatctactgttttggttctctgatttaggtttttttttcttctgtttatatgttagatgg  3406100                                                                                                  <--                                                                                            ---------                                                                                            <--------                                          <-----------RAV1(1)                              --------->GLK1(1)                                        <---------ANAC58            --------->At4g35610    <---------GLK1(1)                                        <---------ANAC58         --------->ICU4           <---------ARR11(3)                --------->GLK1(2)       <---------ANAC46    --------->ANAC46   <-----------GT1    <-- ---------AHL20(2)             <---------YAB1        <---------ICU4 <---------At4g35610   --------->ARR11(3)   atttaatcacagaaacagaatcagagaatgttgatgattcttccttgtggctccataattctaagtcattagcagacatattaacaggtatagatatcta  3406200                        ----------->GT1                      <---------WOX13(1)                   --------->AHL20(2)                   <---------AHL20(2)                 <---------------AGL15                                                              <                 <----------DOF2                                                                  <--                 --------------->AGL15                                                            ---                <-----------------AGL2                                              --------->MYB46(3) -------DAG2    <-----------------AGL3                                       --------->KAN4(1)   ---- >ARR11(3) <---------ANAC58                           --------->ARR11(3)    <---------KAN4(2)    <--- -ARR11(3) <---------ANAC58 --------->KAN4(2)         <---------ARR11(3)   <---------GLK1(2)   ------ --------DOF2------>ZmHOX2a(1)                     <---------WOX13(1)   --------->YAB1       <-------   ctttttgctcatgtcctgtctttaattggttattctgttcaaaacatagactgatagaccttctcagagataaatcagaatgttcaacaaatgctaagaa  3406300  Previous    Next  AGI:  At3g10880.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G05180.1); similar to hypothetical protein OsI_017925 [Oryza sativa (indica cultivar-group)] (GB:EAY96692.1); similar to Os05g0168800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054757.1) Range:  from: 3405820    to: 3407439    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version