Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               ----------->HVH21                                            <-----------HVH21<---------ANAC55(2)                                       --------->ZAT14       ----------->RAV1(2)                                       <---------ZAT14       --------->At4g35610                                       --------->ZAT18--------->ANAC58         <---------ZAT14               --------->ZAT18        ------>ZmHOX2a(1)      --------->ANAC55(2)    --------->GLK1(2)               ----------->RAV1(2)    <-----------GT1     --------->ZAT14   <---------GLK1(2)          --------->ANAC58        --------->ANAC58    ------------------------>ANAC81   <---------GLK1(1)  <---------MYB52(1)<---------ALFIN1--------->YAB1   --------->MYB52(1) --ARR10       <---------ZAT18--------->ANAC58 --------->PCF2<---------At4g35610 ----------->GT1   ttagggaatctctgtatcgcactcgttaggctaagccctcctgcactgtgacccacaagtatcacctgatgaaaaaaacagaacagagaaaaacagagtg  3402300                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                              -------                                                                                              <------                                                                                              <------MYB83                                                                                              -------                                                                                             <-------                                                                                             <-------                                                                  ---------->DOF2            --------                                                 <---------At4g35610                        <--------P                                                 ----------->RAV1(2)    <------ZmHOX2a(1) --------->MYB55(2)                                               <-----------GT1 --------->LBD16            <---------MYB46(3)                 --------->GLK1(2)        <------MYB46(1)     <---------LBD16             --------->ATHB12           <-------TEIL                   <------MYB83        --------->HSFB2a(2)        <---------AtMYB61   <---------ANAC58                      --------->MYB59      <---------HSFB2a(2)     --------->ATHB12   <---------ANAC58     --------->ATHB12 <---------TOE2(3)   <---------LBD16 <------ZmHOX2a(1)<------MYB46(1)   agtttgcttcagattcaagaatcaattcatttgagttctgaattaggtttcacctgttcttgttcggggaaagaggagaggaagtcgatgagtggttggt  3402400                                     --------->GLK1(2)  <---------AtMYB61        --------->ANAC46 ----ANAC58                --------->ANAC58                                   --------->ANAC58 ----ANAC58                --------->ANAC58                                 ---------->DOF2 --GAMYB <---------TOE1(2)--------->LBD16          <---------ARR14(2)   <---------DEAR3(1) ----ANAC46               <---------LBD16          --------->ARR14(2)   <---------ANAC46 -->MYB55(2)           <<<<<<<<<GATA-2            <------ZmHOX2a(1)   --------->MYB52(1) ---MYB46(3)           <<<<<<<<<GATA-3         <------NtERF2         ----------->TGA1 -->MYB52(2)           <<<<<<<<<GATA-4        --------->LBD16        ----------->HVH21 --MYB46(3)            <<<<<<<<<GATA-1       <---------ANAC46  --------->AtLEC2 --AtMYB61            --------->ARR14(2)    <---------LBD16 <---------DEAR3(1)--------->ANAC58 ->MYB111(1)          <---------ARR14(2)   ------>NtERF2<---------TOE2(3) --------->At5g28300   tgtattggtcgaaggtagtgagtgaatccacggatgaagaatcgatgccggaggatttgaggtcgatgcaagtgacggtgaagccagagacttccatgag  3402500                                      <---------ANAC46                                   --------->ANAC58          <---------MYB46(3)                           ------>ZmHOX2a(1)                <---------AtMYB61               --------->At4g35610 --------->ANAC58       <---------ANAC46              --------->ANAC46<---------At4g35610        <---------AtMYB61      ------>ZmHOX2a(2)  ------>ZmHOX2a(2)               --------->ALFIN1      ============================HOX2a_HOX2a           <---------ZAT14    --------->ARR11(3) <---------ARR11(3)              --------->ALFIN1    <---------ARR11(3) --------->ARR11(3)          ---------->DOF2                  >>>>>>>ZML2    <-   acatttgatcttgtaccagcaccatgatcctaagctcatgccatgtattagcacaaagtgtggtggttttctacttggtttgagttctagggtttcttct  3402600                                 <---------ANAC58                                 ----------->RAV1(2)           --------->DEAR3(1)    <---------ANAC58         --------->LBD16     --------->CCA1(2)         ------>NtERF2 --------->DEAR3(1)        --------->DEAR3(1)  --------->ARR14(2)             --------->ANAC46        --------->ANAC58    <---------ARR14(2)             --------->ANAC58    <-----------HVH21        --------->ANAC58  ----------->ARR10                --------->ANAC58  *TSS                  <-        --------->ANAC46--------->LBD16    --------->ATHB12--------->ANAC55(1)--------->bZIP60(2) <--       <---------LBD16<---------LBD16     <---------AHL20(2)                <---------ANAC46      <--      ------>ZmHOX2a(1)<---------ANAC46   --------->AHL20(2)         <---------ANAC46   <-----------HVH21      <---------ATERF1(1)<------NtERF2 <---------ARR11(3) <---------LBD16   <---------ANAC58  ------- --------GLK1(2)    --------->ANAC46   --------->ARR11(3) --------->LBD16   <---------ANAC58  -------   tgattctcctccgccatcgattacgccggagatttgcctgagattttattggggtttttccacggaatgctctgtgtgccttgtcacatttgtcaaacgc  3402700                                                                        --------->AHL20(2)                                                                        <---------AHL20(2)             <---------AHL20(1)                                   ----------->GT1             --------->AHL20(1)                              --------->AHL20(2)             --------->ARR11(3)                              <---------AHL20(2)     <---------ZAT6                                          --------->ICU4     ----------->GT1                              <---------AHL20(2)    <---------AHL20(1)   ----------->GT1       <----------DOF2         --------->YAB1 --------->ICU4 --------ARR14(2)    ---------->ID1             <---------YAB1<---------ICU4                        - -------CCA1(2) <----------DOF2               --------->YAB1 <---------ATHB51                       < ---------TBP<---------ARR11(3)     <---------ANAC55(2)    --------->YAB1                           < -->ANAC58  --------->RVE1(1)       --------->ANAC55(2)--------->AHL20(2)                           - -->ANAC58  --------->CCA1(1)    <---------MYB52(1)    <---------AHL20(2)<---------AHL20(2) ---------   atatatagtgaaaaatatcttttgtttctttctcagttatgtgattttttataatattaaaaaataattagtaattaatttctactattaagacatgacc  3402800        <------ZmHOX2a(1)       <---------YAB1                                                                      --------->At4g35610      <---------TOE2(3)      --------->AHL20(1)              <------ZmHOX2a(1)             <---------At4g35610 -------->ARR14(2)     --------->ANAC58        <---------ANAC58                   <---------ARR14(2) ---------ZAT14        --------->ANAC58        <---------ANAC46                   --------->ARR14(2) ---------ZAT18        --------->ANAC46        <---------ANAC55(1)               <------ZmHOX2a(1) -------->ZAT14  --------->AHL20(2)<---------GLK1(2)    --------->ALFIN1     ---------->DOF2 -->HVH21  ----------->GT1   --------->ARR11(3)<---------ANAC58  <---------AHL20(2)       <---------TOE1(3)   agtatacttaggatagaaatttaacaaggaatatatagaatgtctacttgcgtataatgtgtaggatttatttccaaaaaaaaggatttgttaagctaaa  3402900                              <---------YAB1                        <---------AHL20(2)                        --------->AHL20(2)                     <---------AHL20(2)                       --------->AHL20(2)          <---------AHL20(2)                       <---------AHL20(2)          --------->AHL20(2)                       <---------AHL20(1)       <---------AHL20(2)    <----------DOF2                  --------->AHL20(2) <---------ANAC58   <-----------GT1                  <---------AHL20(2) <---------ANAC58  --------->AHL20(2)  <---------AHL20(2)        ----------->GT1--------->AHL20(1)      --------->AHL20(2)     ------>ZmHOX2a(1)           ---     ---------->DOF2<---------AHL20(2)         --------->YAB1  --------->AHL20(2)                 <--   aatgagcaaaaggaaactatataaatttaattctcatttgcttattctattatataatttactaaataaatccttttttaattctaccaaaaaaacaatc  3403000                    <---------AHL20(1)                    <---------ARR11(3)                    --------->ARR11(3)                                          <---------AHL20(2)                    --------->AHL20(1)                                          <---------YAB1                  --------->AHL20(1)                                           --------->AHL20(2)                  <---------AHL20(1)                                         <---------AHL20(1)                  <---------ARR11(3)           ------>MYB83                  --------->AHL20(1)               <---------AHL20(2)            <---------ALFIN1               --------->AHL20(2)         ----------->GT1                     --------->DEAR3(1)      ----------->GT1       <---------WOX13(1)                    --------->AtMYB61  <---------AHL20(2)     --------->ATHB12<---------YAB1         <---------MYB55(2)  --------->AHL20(2)    <---------AHL20(2)                      --------->MYB46(3) <---------AHL20(2)    <---------YAB1--------->ARR11(3)       --------->SPL7      --------->AHL20(1) --->ZmHOX2a(1)--------->AHL20(2)--------->YAB1------>MYB46(1) --------->AHL20(2) --------DOF2 --------->YAB1     --------->TOE2(3)             <---------AHL20(1)            --------   ctttttttaattggtataaaaatatttttgtccaatattaatccgaaccacccataagttcaaaatttatttagtaaaatatataatagaataagcagtt  3403100                   --------->ARR11(3)                   <---------ARR11(3)                   --------->ARR14(2)               ---------->DOF2    <---------AHL20(2)   <---------AHL20(2)   --------->AHL20(1)   <---------AHL20(1)                   <----------DOF2             <----------DOF2           -------   --------->AHL20(2)                <-----------GT1               --------->MYB52(2)        <-------  --------->AHL20(2)              <---------KAN4(2)      <<<<<<<<<<<<<<<<<LFY                -------- --->GT1----------->GT1      ---------->DOF2 <-----------GT1   <---------MYB46(3)   <---------AHL20(2)   aaaaattaatttgttaaaaaagatattccaaaaaagaataaactttattaccatgaaatagacattggttctttgcacaatgctattttttttttccgac  3403200  Previous    Next  AGI:  At3g10870.1    Description:  hydrolase, alpha/beta fold family protein. similar to hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] (TAIR:AT5G58310.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41533.1); contains InterPro domain Alpha/beta hydrolase fold-1 (InterPro:IPR000073) Range:  from: 3401083    to: 3402677    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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