Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     *TSS                                <-----------GT1                             --------->ALFIN1                           <---------TGA1a                           --------->O2                           <---------ANAC55(1)                           <---------ANAC55(2)                           <---------bZIP60(2)                           <---------ANAC58                           ==================================================bZIP_DOF                           <---------O2                           >>>>>>>>>>HY5                           --------->ANAC55(2)            =========================bZIP_DOF                                                <-------            ---------->DOF2<---------ANAC46                                                  <-------         ---------->DOF2   <---------ANAC58                                               <----------         ============================bZIP_DOF                                         <---------ANAC46     --------->ETT(2)     ----------->STF1  <---------ZAT14                       <---------ANAC58     <---------ETT(2)    <---------TGA2(2)  --------->ZAT14                   --------->ANAC58 ----------->AG         ----------->TGA1    <---------At4g35610               --------->ANAC58 ----------->AGL1       ----------->HVH21   --------->At4g35610   ---------->DOF2 <---------ANAC58  <   aaaattgtagacaaagaagcacagagatgacgtgttactcttcttctgcagtcgctagccctctaatctaaagtctctgcaagtacttgtgtttacttta  3366500                                                          <---------At4g35610                                                          ------>NtERF2                                                          --------->At4g35610                                                         --------->DEAR3(1)                                                         --------->RAP2.6(2)                                                         --------->RAP2.3(2)                                                        --------->RAP2.3(1)                                                        --------->ATERF1(1)                                                        --------->RRTF1(1)                                                        <------NtERF2                                                       <---------RAP2.3(1)                                                       ------>NtERF2                                                       <---------ATERF1(1)                                                       <---------DEAR4(2)                        <---                                                      <---------DEAR3(1)                        -----                                                      --------->ANAC46                          -----                                                      --------->RAP2.6(2)                       -----    <---------ANAC58                                  --------->RAP2.3(2)                    --------    <---------ANAC58                                  --------->DEAR3(1)            --------->LBD16 ---DOF2                                             --------->RAP2.3(1)           --------->ANAC58 --DAG2                 --------->HSFB2a(2)      ---------->DOF2                   --------->ANAC46 -GT1                   <---------HSFB2a(2) ---------->DOF2  ---------->DOF2       --------->LBD16 ------ZmHOX2a(1) ------------>CBF      --------->GLK1(2)--------->RRTF1(3)        --------->ANAC58 <   taggatgcttatctagggtatacaatctagaaaccctagaagaatctaaagtaaagccgccgctaaaggaagacagagacaatacccgaaatagagtgtt  3366600   <---------ATHB12  ------>MYB83  ------>MYB46(1) ------WRKY18(1) ---->WRKY45                                                           --------->ARR14(2) ---->WRKY38(1)                   >>>>>>>>>>>>>>>>>LFY                 <---------ARR14(2) ---->WRKY12                  ---------->DOF2                       --------->YAB1 ->ALFIN1------->TEIL  ----------->GT1                    <---------DAG2 ---------MYB59    <---------ALFIN1                       <----------DOF2                    --------   gaccaaacatggacttaagcccaacttgtttaaaaagcccaatgtacaatgacacaattcctttttctaaacatattcgagtttcaacttgttttaaaag  3366700                                                                                                   <-                                                                                                 ----                                                                                              ------>ZmHOX2a(2)                                                                                              =======                                                                                             ========                                                                                             <------ZmHOX2a(2)                                                      --------->ANAC55(2)                   ---------                                                      --------->ANAC46                      <--------                                                      <---------ANAC55(2)                   <--------                          <---------ANAC55(2)         --------->ANAC58                      <--------                          --------->ANAC46            --------->ANAC58                      ---------                          --------->ANAC58      <---------CCA1(2)                           <--------    ------------>CBF      --------->ANAC58--------->ANAC58             <----------DOF2      --------- -->DOF2 --------->YAB1  <---------LBD16  --------->ANAC58  --------->YAB1 <---------YAB1   ---------   gcctagcccaatactaacttatcttgctacggaagaatgttaactcgcctctatctacgtaatcaaactagggctttcttattctgacgaacaagatctt  3366800                        --------->MYB52(1) ============================HOX2a_HOX2a <------ZmHOX2a(1)    ------>ZmHOX2a(2) ===========================HOX2a_HOX2a --------TOE2(3)     <------ZmHOX2a(2) ------>DOF2        <---------ARR14(2)                                 ----------->HVH21 =======HOX2a_HOX2a --------->ARR14(2)                                 ----------->TGA1 =======HOX2a_HOX2a --------->ARR11(3)                               ----------->RAV1(2) >AGP1  <---------At4g35610                                          <---------ANAC58 -AGP1  --------->At4g35610                       ----------->HVH21  <---------ANAC58    <---------ARR14(2) -ARR11(3)          <---------ARR11(3)      <---------At4g35610      ========================RAV -ARR14(3)          --------->AGP1          --------->ZAT2           <---------AtLEC2    --------->ARR14(2) >ARR11(3)         <---------GLK1(1)        <---------ZAT2       <---------ANAC58     <---------ANAC46 -ARR14(2)         --------->GLK1(1)        --------->At4g35610  <---------ANAC58 <-------GAMYB >ARR14(2)    --------->At4g35610      <-----------GT1    <------ZmHOX2a(2)      <-----------RAV1(1) >ARR14(3) --------->At4g35610       <---------AHL20(2) <------ZmHOX2a(1)    <---------GLK1(1)   aaaggatgtcatcagaagcggagatctatcggaaaaaatttaaacgagctgtctgacaggatcagtgccttgcctgacgatttctgttgcatatactgtg  3366900                       --------->MYB46(3)                                                       <----                    ----------->HVH21                                                         -------                    --------->WRKY38(1)                   --------->HSFB2a(2)                <-------                   --------->At5g28300                    <---------HSFB2a(2)              --------->ANAC58                 <---------DEAR3(1)                      <---------LBD16                   --------->ANAC58                <-------TEIL                        <---------ARR14(2)             <---------ZAT14              --------->ARR11(1)                    --------->ARR14(2)             --------->ZAT18          ---------->DOF2                        <---------ANAC58                  --------->ZAT14        --------->MYB46(3)   --------->ICU4      <---------ANAC58     <---------ANAC46   ---------->DOF2      ----------->RAV1(1)    <---------YAB1      <---------ANAC46<-----------RAV1(1)  --------->ANAC46   tctaatcccaacaaaagatgcggtgaccaccatgattttgtcgaaacgatggcgttttctctggacgatgttgcctaaactcgagtacacagaaagcaac  3367000                                                                                       <---------ZAT18                                                                                       --------->ZAT18                                                                                 <---------ANAC58                                                                                 <---------ANAC58                                                                                --------->ATHB12                                                                             --------->YAB1                                                                           <---------ARR11(1)                                                                          <---------CCA1(2)                             ---------->DOF2                            <---------ANAC58                         --------->HSFB2a(2)                            <---------ANAC58                         <---------HSFB2a(2)                            <---------ANAC46     ---------->DOF2   --------->STY1(2)                                <---------ANAC55(1)    <------NtERF2      <---------STY1(2)                                --------->ANAC55(2) <---------LBD16    <---------ANAC58             --------->ANAC46       <---------ANAC55(2) -----MYB52(2)      <---------ANAC58             --------->ANAC58   <---------ANAC58<------MYB83 -->MYB52(1)--------->ARR14(2)                   --------->ANAC58   <---------ANAC58<------MYB46(1) ---ID1     <---------ARR14(2)    --------->ATHB12              ---------->DOF2<---------YAB1     ---   gaaggcggaaagagtatttgggacttgctagaaaagtcattgcaactacacaaggcaccttcagtagaaagcttgcgtatcatgcttggtccacaatgtc  3367100                                               --------->TOE2(3)                                              --------->ANAC58                                              --------->ANAC58                                           <---------MYB52(1)                          <---------HSFB2a(2)<-------TEIL                               ------>ZmHOX2a(1)                          --------->HSFB2a(2)--------->SPL7                           ------>ZmHOX2a(2)                       <---------PCF2    <---------------AtSPL3                      <------ZmHOX2a(2)                      <------MYB46(1) <---------WRKY18(1)                           --------->ARR11(3)                 --------->DAG2      ----------->HVH21                              <---------ARR11(3)             --------->ETT(1)        --------->WRKY38(1)     --------->TOE1(3)      <---------GLK1(2)             <---------ANAC46      <-------GAMYB            --------->ZAT6          --------->ARR14(2)    <---------REM1(1) <------MYB83 <---------At4g35610     -------->P               <---------ARR14(2)   <---------TOE2(3)--------->ALFIN1 --------->WRKY12  --------->At4g35610          --------->AGP1 --->ZmHOX2a(1) ---------->DOF2    --------->At4g35610 <---------At4g35610         <---------At4g35610   ctgttgatgtagatgtcggaaagtgggtctcgaatgcagttgaccggtacgttagagagctaaccctaagtcttagttttctctcagatcctgccagtaa  3367200                                                                             ------>NtERF2                                                                           <---------ANAC58                                                                           ---------->ARF1                                                                           <---------ANAC58                                                                       <---------ANAC58                                                                       <---------ANAC58                                                                      <------NtERF2                                                                      --------->ZAT2                                                                     ------>NtERF2                                                                    <---------DEAR3(1)                                                                   <---------LBD16          --------->ANAC46                                    <---------ANAC58          --------->ANAC58                     --------->GLK1(2)   --------->LBD16          --------->ANAC58                    <---------ARR11(3)   <---------At4g35610          <----      --------->ANAC46                        <---------GLK1(2)  <---------LBD16                <----  <----------DOF2               ------->TEIL----------->ARR10 <---------ANAC58   <-----------HVH21   gaggctttacaccagcaaaacgcttgtgaaattgaatcttatgggcaagattcttgttgatgttccttccgcggcttgcctcccgtcccttcaatcgctg  3367300                                                                                     --------->LBD16                                                                                   ------>ZmHOX2a(2)                                                                             <------MYB46(1)                            --------->ARR14(2)                               <------MYB83             <---------ANAC46--------->GLK1(2)                       <---------CCA1(1)             ----------->GT1<---------GLK1(2)<---------YAB1          <---------RVE1(1)           <---------ANAC46 <---------ARR11(3)                      --------->ARR11(3)           ----------->GT1  <---------ARR14(2)      <---------At4g35610  <-----------RAV1(1) -----ZAT2--------->ALFIN1----------->ARR10<----------DOF2          <---------ARR11(3) -----At4g35610   ---------->DOF2  <---------YAB1   --------->At4g35610  <---------MYB46(3)    ------   ctccttgtcaatgtggtgtataaagaccaagattctcatgttaggcttttattgagttgccctgttctcagatatttgttggtgatccgaaataagagtg  3367400  Previous    Next  AGI:  At3g10745.1    Description:  MIR158A; miRNA Range:  from: 3366336    to: 3366435    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g10750.1    Description:  similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G05080.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63564.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101); contains InterPro domain FBD (InterPro:IPR013596) Range:  from: 3366932    to: 3368274    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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