Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       <-----------HVH21                              <-------TEIL ------->TOE2(3)    --------->TOE1(3)                             <---------ARR14(2) -ANAC58   ----------->GT1     <---------AHL20(2)                 --------->ARR14(2) -ANAC46  --------->DAG2       ---------->DOF2     <---------ARR11(3) -ANAC58 ---------->DOF2      --------->AHL20(2)--------->HSFB2a(2)--------->CCA1(2)   atctcaactcataaagtcaaaaccttcagacattaaatcacaaatggcttcaagaactaaaccagacagatacagagaaactaaaatttctcaaattcag  3365000                       --------->GLK1(2)             <----------DOF2                                                --------->GLK1(2)            ------>ZmHOX2a(2)     --------->YAB1                 ---------->DOF2          --------->ARR11(3)      <---------ICU4              --------->ANAC58--------->YAB1          <---------ARR11(3)     <---------ATHB12      <----------DOF2     --------->YAB1      --------->ALFIN1 <---------ARR14(2)   --------->DAG2    --------->ANAC58<---------ICU4 ---------->DOF2      <---------GLK1(2)    ---------->DOF2--------->YAB1--------->YAB1            ---   aggcaaaggtgtgatcttttcagagaatctctcaaatcatggtcataaagtatagagctttgataagcaaagaataagaatcatgacataaacaagagaa  3365100            <-----------------AG                 --------->HSFB2a(2)                               <x            <-----------------AGL1       <---------MYB52(2)                                 <--------            ----------------->AGL2  ----------->GT1                                  --------->ANAC58          <---------GLK1(1)   --------->ANAC58   <---------HSFB2a(2)  --------->ATHB12      <--------    <---------ATHB12          --------->ANAC58  <---------LBD16     <---------WOX13(1)      <-------- ------>ZAT18        <XXXXXXXXXXXXXXXXXXXXMIR863-5P     ---------->DOF2              --------->ANAC58   tgcacaatgaagaaacccgaattggaatcaacaagaaatagaaacaaacctctggaatcaaagacaatggattgatggaaacgagacaagaattgggtga  3365200                                                                                      <----------DOF2                                                     <---------ANAC58                <---------ANAC58                           --------->YAB1            <---------ANAC46                <---------ANAC58                  --------->ALFIN1                   <---------ANAC58     --------->TOE1(3)                --------->ALFIN1                 <---------ANAC58         --------->TOE2(3) xxxxxxxxxxxxxxxxxsmallRNA(se3)                  <---------ANAC46       <---------ARR11(3) -ANAC58        <---------ANAC46           --------->ARR11(3)           --------->GLK1(2) -ANAC58       <------ZmHOX2a(1)    <---------AHL20(2)          <----------ID1  <---------ICU4 -ANAC46    <------ZmHOX2a(1)   ----------->GT1  <---------ANAC58       --------->ARR11(3)         --   aggaatcagacagaggaggagtggaggtataagaatgtttatttggatattgcttgcttagagtatgagacaaaaatcttaaatattgctttcacgtttg  3365300               <---------LBD16               --------->LBD16              <---------ANAC58                                        ----------->RAV1(2)              <---------ANAC58                                      <---------ALFIN1              <---------ANAC46                                 --------->TOE1(1)      <---------ANAC58                                  --------->MYB46(3)                          -      <---------ANAC46                        ------>NtERF2    --------->TOE2(1)                <----      <---------ANAC58           --------->ATHB12       <---------MYB52(2)                 <--------- ---->ZmHOX2a(2)         --------->ALFIN1 ----------->HVH21------->TEIL                <-------------   atcgaattgcttgtttccgtggaagaagtggaagttgattagaagcgacgactactgaacgaacctcgttccacctgttcatctatcgcttattttctct  3365400                                                                                     XXXXXXXXXXXXXXXX                                                                                 <---------ICU4                                                                                 --------->AHL20(2)                                                                                 <---------AHL20(2)                                                                              --------->YAB1                                                                              <---------ICU4   ------                                                                              <---------AHL20(2)                                                                              --------->AHL20(2)                                                       <---------At4g35610    <--------ATHB1   ------                                                       --------->At4g35610    <---------AHL20(1) ----                                                    <----------DOF2        --------->YAB1      ------                                              <---------AHL20(2)        <------ZmHOX2a(1)     -------                                              --------->AHL20(2)        --------->YAB1       <-------  <----------DOF2     <-----------GT1        <---------YAB1            ----------->GT1       -------- --------->ID1  --------->ARR11(3)         --------->YAB1             <---------TOE2(3)      <------- ------DOF2     <---------ARR11(3)        --------->ICU4              <---------TOE1(3)      <------- --GT1      ---------->DOF2 <----------DOF2<--------HAHB4     >>>>>>>>>CBP60g<---------YAB1  -------- -----------ANAC81 *TSS  <---------ALFIN1 <---------YAB1      >>>>>>>>>SARD1 --------->ICU4  <-------   ttttcttttttggataaagatgtttctccactttggataatgctattattaattctttgctgaaatttggataaggataataattttttcatacacctac  3365500                                                                                              -------                                                                                          <<<<<<<<<GATA-2    ------>MYB46(1)                                                                       <<<<<<<<<GATA-3    ------>MYB83                                                                          <<<<<<<<<GATA-1  <---------MYB59                                                               <---------LBD16 XXXXX>MIR472    <---------ANAC58                                              ------>ZmHOX2a(2) -->P <---------ATHB12                                                        <---------GLK1(1) >MYB46(1)       <---------ANAC46       <---------ARR14(2)                    <------ZmHOX2a(2) ----->AtMYB61   <---------AtLEC2       --------->ARR14(2)                   <---------ARR14(3) >MYB83--------->ATHB12                <------ZmHOX2a(1)                     --------->ARR14(3) -->MYB55(1)     <---------ANAC58    <---------TOE1(2)                       --------->ARR11(3) --MYB111(1) <---------ANAC58  <---------ARR14(2)                            <---------ARR14(2) ->AtMYB61   <---------ANAC58  --------->ARR14(2)                            <---------AGP1   ------- --MYB111(2) <-------GAMYB   ------->GAMYB                                   <---------ARR11(3) --MYB46(2) <------MYB46(1) --------->ANAC46                 ---------->ID1  --------->ARR14(2) ->MYB46(3) <------MYB83   <---------LBD16             <------MYB46(1)--------->At4g35610 <<<<<<<<<GATA-4 --MYB55(2) <---------MYB46(3) <---------GLK1(2)       <------MYB83   <---------At4g35610--------->ARR14(2)   cataccaaatcatttggttgcatgtcttcaacggaatcggaggaactgttttttgtttggtttgtttttttaagcagaagatctcggattgaatccacac  3365600                 <------MYB83                 <------MYB46(1)                --------->MYB59          --------------->AGL15         ----------------->AGL3         =====================HOX2a_HOX2a         ===============================================================MADS_MADS         <-----------------AGL3         ------>ZmHOX2a(2)        ======================HOX2a_HOX2a       <---------ARR14(2)       --------->ARR14(2)       <---------ARR11(1)       <---------AGP1       <-----------ARR10                     ----------->GT1              --------->TOE1(3)       --------->ARR11(3)                    <---------MYB46(3)     --------->YAB1       <---------ARR11(3)                 --------->ALFIN1          <------ZmHOX2a(1)      <---------ARR14(1)                 ------->MYC3           <<<<<<<<<MYB98      <---------CCA1(2)     <---------AHL20(2)                 <-------GAMYB     --------->LBD16   <------ZmHOX2a(1) <-------MYC3         <------MYB46(1)   <---------LBD16   --------->MYB59 <-------TEIL     ----------------->AG--------->TOE2(3) -->ANAC46<---------------AGL15 --------->AHL20(2)    ----------------->AGL1 <---------ICU4 -->ZAT6<------ZmHOX2a(2)   --------->AHL20(2)<-------GAMYB   <------MYB83--------->YAB1   taatctccggatcttaatttggttaggaatttttttatatacatgtgtggttaaatgcctaagtgggttaggataaccataatgtctcattctctcattt  3365700                                  <------MYB83                                 <---------------AtSPL8                                 --------------->AtSPL8                                 --------->MYB46(2)                                 --------->MYB59                                 <---------MYB46(3)                                 <---------------AtSPL3                                 --------->MYB111(1)                                 --------------->AtSPL3                             <---------YAB1                                                     <----                        <--------ATHB1                                                       --------                        -------->HAHB4                                                     --------->AHL20(2)                        --------->ATHB12                                                  --------->YAB1                        <---------ICU4                                                  --------->AHL20(2)                        --------->YAB1                                              --------->At4g35610                       --------->ICU4       --------->REM1(1)   <---------TOE2(3)   <---------ZAT2       --------->YAB1  <---------YAB1 --------->REM1(1)       ---------->DOF2       --------->ZAT2  <---------ARR11(3) --------->YAB1  <-------TEIL          --------->TOE2(3)        <---------At4g35610  --------->ARR11(3)--------->ICU4<------MYB46(1)       <---------CCA1(2)    <---------GLK1(2)  -----   gagagatactaataaacatgctataatgattgtgtttggtacatctacatctaaacttctatctcaaaggttttctacataatctcagcttaaaataata  3365800    --------->AtLEC2      --------->MYB59                            --------->AHL20(2) -----AHL20(2)            --------->MYB52(2)              <---------ANAC46 ->YAB1   <---------REM1(1)       ------>NtERF2           <---------YAB1                          --- ---->AHL20(2)    --------->ZAT6 --------->ANAC46    <-----------RAV1(1)     <-----------HVH21 ------   aaatccatggagatgtagaaacactagttagttcgacaccagggcttctaacctattgttgtgtttgcacattaaacagtgtcaagaacatgttgtccta  3365900  Previous    Next  AGI:  At3g10740.1    Description:  ASD1 (ALPHA-L-ARABINOFURANOSIDASE); hydrolase, acting on glycosyl bonds. similar to glycosyl hydrolase family protein 51 [Arabidopsis thaliana] (TAIR:AT5G26120.1); similar to alpha-Arabinosidase1 [Pyrus communis] (GB:BAF42035.1); similar to alpha-L-arabinofuranosidase [Prunus persica] (GB:ABF22680.3); similar to alpha-L-arabinofuranosidase [Malus x domestica] (GB:AAP97437.1); contains InterPro domain Carbohydrate-binding, CenC-like (InterPro:IPR003305); contains InterPro domain Galactose-binding like (InterPro:IPR008979); contains InterPro domain Alpha-L-arabinofuranosidase, C-terminal; (InterPro:IPR010720) Range:  from: 3360893    to: 3365419    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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