Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   ----------->RAV1(1)              --------->ANAC58              --------->ANAC58                                               --------->ANAC58              --------->ANAC46                                               --------->AtLEC2       ---------->DOF2                                                       --------->ANAC58     --------->ANAC58                                                        --------->ANAC46     --------->ANAC58                                                   ------->PIF5    --------->SPL7                                                      <-------PIF5   --------->MYB52(1)  --------->ARR14(2)                              --------->ANAC58          ----  <---------SPL7 --------->MYB52(1)                                    --------->ANAC58          ---- --------->DEAR3(1)    --------->GLK1(1)                         ---------->DOF2                 ---- --------At4g35610     <---------GLK1(1)                      --------->ANAC58                  ----- ------->At4g35610  ------->GAMYB                             --------->AtLEC2         ---------->DOF2 ----DOF2    --------->WOX13(1)                               --------->ANAC58 --------->YAB1 <------   gagccgaacgaaagtcactcaacagaattctccgatgtactggttttagtccgtctctaacatcaggcaaagcacgtccaagcaaaacagagagcgcata  3345900                                                                              --------------------->WRI1                                                                          --------->DEAR3(1)                                                                          --------->RAP2.6(2)                                                                          ------->GAMYB                                                                          --------->ANAC46                                                                         <------------AtMYB77                                                                         --------->MYB46(3)                                                                       ------>MYB46(1)                             <---------At4g35610                       --------->MYB52(1)     -------                             --------->At4g35610                       ------>MYB83           <------                    ----------------->AGL3                         --------->ANAC58           -------      --------->ANAC46      ------->TEIL                    --------->LBD16>>>>>>>>>>>>>>>>>LFY    <-   --------->ARR14(2) ------>ZmHOX2a(1)                   <---------LBD16--------->DEAR3(2)   <------   <---------ARR14(2)--------------->AGL15           <---------ANAC58<---------MYB59 <---------At4g35610 ----->ANAC46    <---------ANAC58                    <---------ANAC58--------->AtMYB61    --------->LBD16 ----->ANAC58    <---------ANAC58                   <-------TEIL --------->MYB46(3)  --------->At4g35610 ----->ANAC58   <---------HSFC1(2)                --------->ARR14(2) ------->GAMYB<---------MYB52(1) ---->SPL7      --------->At4g35610 --------->DAG2<---------GLK1(2)--------->ANAC58  <---------ZAT2<- ---ARR14(2)    --------->HSFC1(2)---------->DOF2 <---------ARR14(2)--------->MYB46(3)  <---------LBD16   cgacatatacgactcagtagcttccttatgtagctcaaaaggcacaatacgagattcgtccccagaaacaaccaaaccgccattgttagctccggactct  3346000                                                                                                    <                                                                                                   <-                                                                                                   <-                                                                                                  ---                                                                                    --------->ATERF1(1)                                                                                    <------NtERF2 ---                                                                                  <---------ANAC46<--                                                                                  <---------DEAR3(1)-                                                                                  <---------ANAC58<--                                                                                  <---------ANAC58<--                                                                                 <------NtERF2   <---                                                                                 <---------LBD16<----                               --------->At1g77200                             ----------->HVH21<----                               --------->DREB2C(2)                             <---------DEAR3(1)<---                               --------->DEAR4(1)                             ------->MYC3      <----                            <---------ALFIN1   --------->LBD16                <-------MYC3      <----    <---------At4g35610    <---------ABI4(2)   <---------SPL7                <---------ANAC58   <----  <---------WRKY18(1)      --------->ZAT2    <---------LBD16                 >>>>>>>>CAMTA3    ------ --------->WRKY12         --------->ANAC46 <-----------GT1                   <---------O2      ------ ----------->HVH21     -------->P       <---------ARR14(2)                   <---------ANAC58 ------- -->HSFB2a(1)    --------->LBD16        --------->ARR14(2)  <---------ANAC55(2)--------->ALFIN1<----- ---HSFC1(2)<---------At4g35610----------->HVH21           --------->SPL7--------->CCA1(2)  <-------- -->HSFC1(2)--------->At4g35610--------->DEAR3(1)        <---------SPL7 <---------ARR14(2)  <-------- --------ANAC58  ------>NtERF2 <---------ETT(1)----------->HVH21      ----------->ARR10   <-------TEIL ---HSFB2a(1)    <---------ZAT18        ------->TEIL   <------ZmHOX2a(1)--------->ARR14(2)<---------ZAT14 --------ANAC58<---------LBD16--------->DEAR3(2) --------->SPL7   <------ZmHOX2a(1)<---------SPL7<---   tccttgacctgctcatctccgcgcttaccagcaccgacaacgaatttgccggaccgaggagtacgggaggagaagaaacgcgtggcggagggttcagtgc  3346100       <------NtERF2     --------->ANAC58     --------->ANAC58    --------->ATERF1(1)    --------->RAP2.6(3)   <---------ATERF1(1)  <---------ARR14(2)  --------->ARR14(2) <------NtERF2 --------->ATERF1(1) ---------ATERF1(1) --------DEAR3(1) --------ANAC46 --->NtERF2 ------>ATERF1(1)             <---------ARR14(2) ----NtERF2                   --------->GLK1(2) -------->LBD16              <---------ARR14(2) -------LBD16                --------->ARR14(2) -------At4g35610      --------->ALFIN1 ------RAP2.3(1)     --------->ALFIN1 -----RAP2.3(2)      ----------->HVH21 -----RRTF1(3)      <-----------HVH21 ------ATERF1(1)   <---------DEAR3(2) -----RRTF1(2)     <------MYB46(1) -----DEAR3(1)     <------MYB83 -----RAP2.6(2)   <---------MYB46(3) --->ZAT14        --------->MYB46(2) --->SPL7         --------->MYB55(2)           <---------ANAC46 -->ALFIN1        <---------DEAR4(1)          <------NtERF2 ----ZAT14        <---------DEAR3(1)        <---------DEAR3(1)                  <------ZmHOX2a(1) -ANAC58         <---------ORA47(1)        --------->At4g35610             --------->ALFIN1 -ANAC58  --------->ICU4<---------ANAC46  --------->ALFIN1        --------->CCA1(2) ------ANAC46   <-----------HVH21        <------ZmHOX2a(1) <------ZmHOX2a(1)  <---------ANAC46  <----   ggcggagacggcataatgggtcggtgagggggaatcggaagaaggagcggcgaagaagggaggaagagagacggagagtggaggagagagacatgagaga  3346200  <---------ZAT6 <---------TOE2(3)                              <-----------RAV1(2)                        ---------- <---------TOE1(3)                          --------->AtLEC2        <-----------GT1   ---------->DOF2 -----ZAT6                           --------->ZAT14    <----------DOF2          ----------->GT1   gttagggttagggattgaagcagtggaatggcataatactggagtcatgcccagagggttttagggatttttacaagtacaaatggattaaagtgctaaa  3346300                                                          <----------DOF2                                                    --------->ATERF1(1)                                                    <------NtERF2                                                   --------->LBD16                                                  <---------ANAC58               --------->LBD16                    <---------ANAC58             <---------LBD16                      <---------ANAC46            --------->MYB52(1)                    <---------DEAR3(1)           <---------ALFIN1     <------NtERF2    <---------LBD16                                    -         <---------ALFIN1 <-----------RAV1(2)    <<<<<<<<<E2Fc                        ------->TEIL --         =============================RAV    <----------DOF2                         <---------CCA1(2) ->GT1   ----------->RAV1(1)   ------>NtERF2 *TSS<<<<<<<<<E2Fd                  --------->GLK1(2)  <-   accctagagagccacaccggagaatttctcaggcgcgaatttcaatactttggcgggggtctttgtgtccaaacaaaaaactaatctgtatctctatttg  3346400                                  <------------MYB.PH3(2)                                  <---------MYB59                                <-----------GT1                           --------->AHL20(2)           <---------AHL20(2)--------->YAB1          --------->AHL20(2)<---------YAB1    --------->ANAC46       <---------AHL20(2)  <-----------GT1         --------->YAB1 -------->CCA1(2)        <---------YAB1<----------DOF2                        <----------DOF2 ------->ARR11(3)       <---------ARR11(3)                            <---------ZAT14    --------->WOX13(1) --------ARR11(3) --------->ANAC46<---------MYB52(2)                  --------->ZAT14  <------ZmHOX2a(2)   agatatacactattttatacaaacaagattataataactaactttcgatttcaatttctaatttcatacttgtatagtgtctttgttagatcaattacag  3346500                         <-----------GT1             <---------MYB46(3)                                       --------->GLK1(2)         --------------->AGL15  <---------AHL20(2)                    --------->ARR14(2)            -      <-----------GT1  --------->AHL20(2)      --------->MYB52(2)     <---------ARR14(2)--------->MYB52(1)   aactaaattcaccaattgttgaaaatttaacaaatttatggagaaatgttagtcacatttttgaagtttgcgattcttctatcgactcgaaaacggtaga  3346600                                             <---------ICU4                                             --------->YAB1                                            <---------ATHB12                                            --------->ICU4  ---------->DOF2                                       --------->ANAC58    --------->AtMYB61            --------->ANAC55(2)        --------->ANAC46<---------ETT(1)                          ----            <---------ANAC55(2)        --------->ANAC58--------->DEAR3(1)                     -------     <-----------GT1                  --------->WOX13(1)------>NtERF2                    <------ZmHOX2a(2) --------->ATHB12                  ------->TEIL   ------->TEIL                         <------ZmHOX2a(1) -------->ICU4 ------->TEIL --------->AHL20(2) <---------YAB1            <---------GLK1(2)   --------   gaatgatttacattatgtatttgtagcaaaaaaaatgtatcaagcaatgatgaaactccgaccaaagagaccagagaatttctcagacaggatcaaaaag  3346700                                      <----------ID1                                    <---------------AtSPL8      --------->ANAC58          --------->CCA1(2)      --------->ANAC58         --------->ARR11(3)                                     <---------WOX13(1)      --------->ANAC46 <---------ANAC58                           --------->ANAC58  <------ZmHOX2a(1) ------->GT1           <---------ANAC58                       <-----------------------TaNAC69(2) -->DAG2      --------->GLK1(2)<---------ARR11(3)           --------->ALFIN1     <---------LBD16 -->DOF2 ---------->DOF2<-----------HVH21    --------->AHL20(2)   --------->ANAC58--------->LBD16   agataaacaagcaaagaatcaataagcgtgagagatataagggacaaaaaaatcgagtttaagtggggaagaaaccaaaaactccaggattgatcagaga  3346800  Previous    Next  AGI:  At3g10690.1    Description:  DNA gyrase subunit A family protein. Identical to Probable DNA gyrase subunit A, chloroplast/mitochondrial precursor (GYRA) [Arabidopsis Thaliana] (GB:Q9CAF6;GB:Q9SG75); similar to TOPII (TOPOISOMERASE II) [Arabidopsis thaliana] (TAIR:AT3G23890.2); similar to TOPII (TOPOISOMERASE II), ATP binding / DNA binding / DNA topoisomerase (ATP-hydrolyzing) [Arabidopsis thaliana] (TAIR:AT3G23890.1); similar to Probable DNA gyrase subunit A, chloroplast/mitochondrial precursor (GB:Q7XZF7); similar to putative DNA gyrase subunit [Oryza sativa (japonica cultivar-group)] (GB:AAP73860.1); similar to DNA gyrase subunit A, chloroplast/mitochondrial precursor Range:  from: 3339397    to: 3346345    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g10700.1    Description:  GHMP kinase family protein. similar to Os04g0608100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053811.1); similar to OSIGBa0113I13.15 [Oryza sativa (indica cultivar-group)] (GB:CAH66789.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70198.1); contains InterPro domain Ribosomal protein S5 domain 2-type fold (InterPro:IPR014721); contains InterPro domain Galactokinase; (InterPro:IPR000705); contains InterPro domain Mevalonate and galactokinase; (InterPro:IPR006206); contains InterPro domain GHMP kinase, C-terminal (InterPro:IPR013750); contains InterPro domain GHMP kinase; (InterPro:IPR006204) Range:  from: 3346583    to: 3351028    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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