Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   <---------ANAC58                 <---------ANAC58              <----------DOF2            <---------At4g35610            --------->At4g35610         <---------MYB52(1)         <-------TEIL        <------MYB83     <---------TOE2(3)       <------MYB46(1)                     <---------ANAC58     <---------TOE1(2)    <---------ANAC58                       <---------ANAC58                   < <---------At4g35610      <---------ANAC46                       <---------ANAC46            -------- --------->At4g35610      <---------ANAC58           <-----------RAV1(1)      <----------DOF2<-------   ggcttctgaggttcagctttcgtctctggcttggtttcagacgttgtttctggttttgttgtctctggcttggattcagactttgtttctggttttgctg  3333900                                                <---------At4g35610                                               ------>ZmHOX2a(1)      <------NtERF2                       <---------HSFB2a(1)      <---------ZAT14                    --------->HSFC1(2)                                      <---      --------->ZAT18                    <---------HSFC1(2)                                     <----      --------->At4g35610                <---------HSFB2a(1)                                    -----   <---------At4g35610                   --------->HSFB2a(1)                                    -----   --------->At4g35610                  <---------ARR14(2)                                      <----  --------->LBD16                       --------->ARR14(2)                                    <------  ------>NtERF2                         <-----------ARR10                      <------MYB46(1)-------  <---------ATERF1(1)                  <------ZmHOX2a(1)                       <------MYB83 --------- ---------LBD16                     <------ZmHOX2a(1)       <---------LBD16 <---------AtLEC2--------- ->At4g35610               <----------DOF2--------->HSFB2a(1)  <------ZmHOX2a(1)        <---------HSFB2a(2) --At4g35610--------->MYB46(3)   <-----------RAV1(2)  <----------DOF2 <----------DOF2   --------->HSFB2a(2)   actccggctgcacaacaacttcccgcttactttcttcaggaggaacttcctgcttactttcttcaggaacaactttctgcttggtttcttctgcaagaac  3334000                              <---------ARR14(2)                              --------->ARR14(2)                        ------>ZmHOX2a(2)       <----------DOF2 --------->GLK1(1)    ===========================HOX2a_HOX2a    ------>ZmHOX2a(1)  <---------GLK1(1)    ===================================HOX2a_HOX2a -------DOF2          <---------ARR11(3) -----HSFB2a(1)       --------->ARR11(3) ---->HSFC1(2)        <---------AGP1                     <------MYB46(1) ---->HSFB2a(1)      <---------CCA1(2)                   <------MYB83 -----HSFC1(2)      <------MYB46(1)                     <---------AtMYB61 ---ARR11(3)        <------MYB83                  <---------LBD16 -->ARR11(3)      <--------P  <---------AGP1      <---------ANAC46 <---------ANAC58   ---------->CDC5 >ANAC58       <---------TOE1(3)------>ZmHOX2a(2)<---------LBD16   <---------ANAC58   <-----------RAV1(2) >ANAC58      <-----------RAV1(2)          --------->ZAT14   <----------DOF2 <---------YAB1----------   tttctccttcttttcttcaggttggatctctagatcgggtttcagtttagtttcgggattggtctttgagcttggcattgtgataggctcagggggttta  3334100                                                                                              <------                                                                                           --------->LBD16                                                                                        <------ZmHOX2a(2)                                                                                       <---------ARR14(2)                                                                                       --------->ARR14(2)                                                                                 --------->ZAT2                                                                                 <---------At4g35610                                                                         <---------ANAC58 <---------ANAC46                           --------->At4g35610                           <---------ANAC58------>ZmHOX2a(2)                           <---------At4g35610                          --------->HSFC1(2)<---------ANAC58                           <---------ZAT2                       >>>>>>>>>TBF1    --------->At4g35610               <---------At4g35610    XXXXXXXXXXXXXXXXXXXX>MIR426  >>>>>>>>>TBF1 <---------ZAT2    <- ->GT1         --------->At4g35610 <----------DOF2    <---------YAB1    <---------HSFC1(2)<---------ANAC58   ttctggacttgatcagtagctggttctgaagctgcttctttagaaacttgtccattaccatgggaagaagaagaagcttgctcagctccgatccgtggcc  3334200                         <---------MYB52(2)                 <---------ICU4                        --------->ANAC46       <------MYB46(1)            ----------->HVH21        --------->LBD16        --------->YAB1           <---------RAP2.6(3)      --------->HSFB2a(2)   --------->ANAC58           --------->At5g28300      --------->HSFC1(1)--------->ANAC58          --------->ANAC46          <---------HSFB2a(2)------->GAMYB                      --------->YAB1          --------->RAP2.6(2)       <---------HSFC1(1)--------->ANAC46      --------->ARR11(3)        ------>NtERF2   --------->ANAC58       <------MYB83<---------ATHB12 <---------ARR11(3)        <---------At4g35610  ----------------->AGL2   --------->ANAC58--------->YAB1     <---------YAB1        --------->At4g35610<-----------GT1    --------->MYB59     --------->MYB46(3)   --------->YAB1 ---ATERF1(1)           --------->ANAC58   --------->ATHB12--------->ICU4  --------->CCA1(1) --------ALFIN1       <---------AtLEC2    --------->ICU4  --------->ANAC58 --------->RVE1(1)     ----   tccacattgcagccgtaacagtttgcaagaaaccatttccagaaatgtttggtccaacgcaagcattacccatcaaaatatctctctacttataatcaac  3334300                     --------->CCA1(2)                                 --------->YAB1                     <------ZmHOX2a(2)                                <---------YAB1                    <---------ARR11(3)                               --------->ARR11(3)                    --------->AGP1                                  -------->HAHB4                    <---------AGP1                                  --------->YAB1                    --------->ARR11(3)                  ------>ZmHOX2a(2)                    <---------ARR14(2)             ------>ZmHOX2a(2)<---------ICU4                    --------->ARR14(2)             ====================HOX2a_HOX2a                    <---------ARR14(3)            <---------At4g35610<---------ARR11(3)                    <-----------ARR10            --------->ARR14(2)<---------ATHB12            <-----                    --------->ARR14(3)     <-----------GT1         --------->ICU4       ---------->DOF2       <----------DOF2------>ZmHOX2a(2) <------------CBF===============HOX2a_HOX2a --------->DAG2 --->GAMYB   --------->ANAC46---------->DOF2 <---------At4g35610------>ZmHOX2a(1) ---------->DOF2   agcatcaagctttccacatcaagatctgatcaaaagaacacaaattgacctgatctgatctcattcctaatgatcatagacactaaaagtgaaagtcaaa  3334400                                                                        --------->YAB1                                                                        <--------ATHB1                                                                       --------->ICU4                                                                       <---------ATHB12                                               <---------ARR14(2)  ------------>CBF                                              ========================HOX2a_HOX2a                                              <------ZmHOX2a(1)   --------->ANAC58                                         --------->CCA1(2)      <-----------RAV1(2)                                        --------->ARR11(3)     <------ZmHOX2a(2)                                        <---------ARR11(3)    --------->ARR14(2)                                        <---------AHL20(1)    <---------ARR14(2)                                        --------->AHL20(1)    <-----------HVH21                                       <-----------TBP      --------->LBD16                                   ------------>CBF       <-----------------AGL1 <----------DOF2                  ------->GAMYB--------->ARR14(2) --------->ANAC58 ----CCA1(2)                     --------->MYB46(3)       <---------LBD16                --------->SPL7   tctctttataatctaagacttggttctcttgtgcaacgacaatatataggatttgatcactccggatcaggcaatgattttaaaaactccgaacaccgat  3334500                                                                    --------->ANAC58                                                                ----------->RAV1(1)                                                         --------->WOX13(1)                             --------->MYB52(1)        ------------>CBF               <---------REM1(2)      ------->TEIL     <---------ATHB12                       -------   --------->ANAC58       --------->AtLEC2           --------->WOX13(1)               <--------------   --------->ANAC46    <---------MYB46(3)           --------->MYB46(3)        --------->YAB1 --------   --------->ANAC58    <---------DEAR3(1)          ------------>CBF --------->ANAC58  ---------------   ggaacaagcaaaaaccctactcgggtcgatgcaacggatgaatcttgcacaacaacaatcaatctgccacaagaaaaaaatcaaaattttcaaaatggga  3334600                         ---------->DOF2                    ------>MYB46(1)                    ------>MYB83                    ----------->RAV1(1)             --------->ANAC46                   --------->ANAC46            <---------ARR14(2)                  --------->MYB46(3)           --------->GLK1(2)                       ------>ZmHOX2a(2)                 --------->ANAC58              --------->ARR14(2)                    --------->ARR14(2) ---->GT1        --------->ANAC58         ------->TEIL --------->MYB52(1)            <---------ARR14(2) ---AGL1        ------->TEIL           <---------MYB52(2) ------->GAMYB              <---------AGP1 --->GT1     <---------MYB52(2)        <---------ATHB12----------->RAV1(1)        <------ZmHOX2a(2) -->AGL1   <-----------GT1 <---------MYB52(2) <---------ARR14(1)           ---------->DOF2       ----   aaatcgaaagtttaaacgaacccaacacaaagaacgatgcaatgaaccgaatccagacaacagaaattgtctgaaaacaaagagatcgatctgggattga  3334700                                                                                                  <--                                                                                                  <--                                                                                                  <--                              --------->ETT(1)                                                    ---                     <------MYB46(1)                                                             <---                     <------MYB83                                                          --------->MYB52(1)                    --------->MYB46(2)                                                     ----------                    --------->MYB59             --------->GLK1(1)                     --------->DAG2  ---------->DOF2   <---------AtMYB61 --------->MYB52(1)         ---------->DOF2     ---------->DOF2 ------>DOF2        --------->MYB111(1)     ----------->GT1 ----------->GT1     <---------AtLEC2 <---   aaagaaaaggaacaatattggtttggtatttgtcggaaaataagggagggaaatcgagagaatgcttaaaagcactacatttgcataaaaagctaaaggg  3334800  Previous    Next  AGI:  At3g10660.1    Description:  CPK2 (CALMODULIN-DOMAIN PROTEIN KINASE CDPK ISOFORM 2); calmodulin-dependent protein kinase/ kinase. similar to CPK20 (calcium-dependent protein kinase 20), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT2G38910.1); similar to CPK1 (calcium-dependent protein kinase isoform AK1), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT5G04870.1); similar to CPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT2G17290.1); similar to calcium-dependent protein kinase 2 [Nicotiana tabacum] (GB:CAC82998.1); similar to calcium-dependent pr Range:  from: 3331403    to: 3334273    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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