Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         --------->At5g28300      ----------->GT1   --------->MYB52(1) -------ARR14(2) ------>ARR14(2)                                                         <----------DOF2     -------- ----->GLK1(1)                                                     --------->YAB1------>ZmHOX2a(2) --->GT1                  ------>ZmHOX2a(1) --------->ANAC46   ---------->DOF2   ----------->GT1   aatccaaacggtaaaaaaactacagttcctaaaaaacaatttctctaagaaactcagaaactacaaaaagaataacttttggatcgaaaaaatcaacaat  3330500                          <---------At4g35610                         <-----------RAV1(1)                 <---------At4g35610                 --------->At4g35610                 <---------ZAT2   --------->LBD16                        <---------LBD16                 <---------HSFC1(2)                                      --------->HSFB2a(2)                 --------->HSFC1(2)                                      <---------HSFB2a(2)                 <---------HSFB2a(1)  <-------GAMYB                     <---------LBD16            <---------HSFC1(1)    ------>NtERF2                       <---------ARR14(2)            --------->HSFB2a(2)  <---------ANAC46                     --------->ARR14(2)            --------->HSFC1(1)<---------ARR14(2)              --------->DEAR3(1)            <---------HSFB2a(2) <---------LBD16   <------NtERF2    <---------ANAC58                 <        <----------DOF2<---------At4g35610      <---------ANAC58   <---------ANAC58    --------->LBD16      <---------------AGL15 <----------DOF2---------->DOF2 --------->ARR14(2)     <------ZmHOX2a(1) -  <-----------GT1--------->HSFB2a(1) <---------MYB46(3)----------->RAV1(2)--------->LBD16----------->ARR10 ->MYB46(3)<---------LBD16--------->At4g35610   <---------ANAC58  <-----------------------TaNAC69(2)<   cttcttacctctttctggaagctgcttctgctgttccggcgattgtaaaggcgtctcaccagagccgaggcgtttccgggataaggacccgaagagcctc  3330600                                                           <---------At4g35610                                                           --------->At4g35610                                                         <------NtERF2                                                        --------->ABI4(1)                                                        <---------ATERF1(1)                                                       --------->ATERF1(2)                                                       --------->RRTF1(3)                                                       --------->RAP2.6(2)                                                       <---------ATERF1(2)                                                       --------->RAP2.3(2)                                                       --------->RAP2.3(3)                                                       --------->RRTF1(2)                                                       --------->DREB2C(2)                                                       --------->DEAR3(1)                                                       <---------ALFIN1                                                      <------NtERF2                                                      --------->ORA47(2)                                                      --------->RAP2.6(1)                                                      --------->RRTF1(1)                                                      --------->RAP2.3(1)                                                      --------->ERF1                                                      --------->DEAR4(2)                                                      --------->ATERF1(1)                                                     --------->DREB2C(1)                                                     <---------ATERF1(1)                                                     ------>NtERF2                                                     <---------RAP2.3(1)                                                     <---------DEAR4(2)                                                     --------->At4g35610                                                    --------->ANAC46                                                    <---------ATERF1(2)                                                    --------->RAP2.3(3)                                                    --------->RAP2.3(2)                                                    --------->RAP2.6(2)                                                    --------->ATERF1(2)                                                    --------->DEAR3(1)                                                    ------->GAMYB                               --------->MYB46(3)  --------->MYB46(3)                               ------>ZmHOX2a(2)   --------->DEAR3(2)                              <------ZmHOX2a(2)    --------->ERF1                             <---------TCP20       --------->ATERF1(1)                             --------->ARR14(2)    --------->RAP2.3(1)                             <---------ARR14(2)    <---------MYB55(2)                             <---------TCP16(1)   --------->ZAT2                          --------->DEAR3(1)      --------->At4g35610     ------>NtERF2                         --------->ATERF1(1)      <---------At4g35610  ------>NtERF2                         <---------LBD16          <---------ATERF1(1)  <---------ATERF1(1)                         <------NtERF2            ------>MYB83         --------->LBD16             --------->ICU4--------->LBD16        ------>MYB46(1)     --------->ANAC58        --------->ANAC55(2)<---------ATERF1(1)   --------->ANAC46     --------->ANAC58        --------->ANAC46------>NtERF2           ------->GAMYB----------->HVH21 ---------ZAT14         <---------RAP2.3(1)    --------->MYB46(3)     --------->ANAC46 -------->ZAT14        <---------DEAR3(1)     -------->P------>NtERF2<---------LBD16       ------>ZmHOX2a(1) ---------ZAT18        --------->ANAC46<---------ICU4<---------DREB2C(1) --------->DEAR3(1)==========   tgagcactataagtaataagtctctgcgccggatccaccaattttgacaaccagccgccgcctctgacatctccgccaccaagtccagcgttcctcacag  3330700                                                                                  <---------SPL7                                                                                 <---------ANAC46                                                                                <------NtERF2                                                                                --------->RAP2.3(1)                                                                               <---------ATERF1(1)                                                        <----------DOF2        ------>NtERF2                                                       --------->HSFB2a(1)    --------->DREB2C(2)                                                       <---------HSFB2a(1)    --------->RAP2.3(2)                                                       <---------HSFC1(2)     --------->ATERF1(2)                                                     --------->ARR14(2)       --------->RRTF1(3)                                                     <-----------ARR10        --------->DEAR3(1)                                                     <---------ARR14(2)       <---------DEAR3(1)                                                   --------->LBD16            --------->RRTF1(2)                                                  --------->HSFB2a(2)         --------->RAP2.6(2)                                                  <---------HSFB2a(2)        --------->RAP2.3(1)                                             <---------At4g35610             --------->ERF1                                             <------NtERF2                   --------->RRTF1(1)                                             --------->At4g35610             --------->ORA47(2)                                            <---------DEAR3(2)               --------->DEAR4(2)                                            ------>NtERF2                    --------->RAP2.6(1)                                           <---------DEAR3(1)               <---------ATERF1(1)                                          <------NtERF2--------->HSFC1(2)   --------->At4g35610            --------->YAB1                --------->ATERF1(1)               --------->LBD16           ==============HOX2a_HOX2a      <---------MYB52(1)                ------>NtERF2           <------ZmHOX2a(2)             <-----------HVH21                 --------->ANAC46     <------MYB83 <------ZmHOX2a(1)      <---------ATERF1(1)            <---------ARR14(2)    -------     <---------MYB46(3)                 --------->DEAR3(1)        --------->ARR14(2)          <------     <------MYB46(1)                   --------->DEAR3(2)     <---------LBD16--------->ATERF1(1)    <---------AtMYB61             ------>MYB46(1) --------->ANAC55(2)   --------->ARR14(2) <---------At4g35610   <---------MYB52(1)             ------>MYB83 <---------SPL7------>ZmHOX2a(1)--------->RAP2.3(3) <---------MYB46(3)             --------->TOE1(2) --------->ANAC46<---------ARR14(2)     <---------WOX13(1) =================HOX2a_HOX2a   --------->TOE2(2)<---------LBD16--------->LBD16--------->ABI4(1)   aagtcgttggtcgatcataaggagttttctgagacctacgagccgtcggcttccggaactttcctccggttcccaatccgccgccgtatggattgctgct  3330800               --------->ANAC58          --------->LBD16          ------>NtERF2          <---------ZAT18         <---------ANAC46         --------->DEAR3(1)         <---------ANAC58         <---------ANAC58                                                    ----------->GT1       --------->SPL7         --------->ANAC46               ------->GAMYB  --------->DAG2      --------->ALFIN1        --------->ANAC58              --------->MYB46(3)      ----------->HVH21       --------->ANAC58------->TEIL  <---------MYB52(2)     <-------PIF5          -------->P         <---------ARR14(2)      --------------->AGL15     <-----------HVH21    ----------->RAV1(1) --------->ARR14(2)     <-----------------AGL1     ------->PIF5   <---------MYB52(1)        --------->GLK1(2) <---------HSFB2a(1) -->At4g35610  --------->ANAC46               <-----------ARR10 --------->HSFB2a(1) ---At4g35610  --------->ANAC58              <---------ARR14(1)------->TEIL--------->SPL7        *TSS   ctctccccgtgccgcgctcgccattagccaacacgaaaactgagaacgaatctagggtttcaacgaacctttctgcgtaaggtaaaatcgaaaacttatt  3330900                                                         --------->ANAC58                        ----------->GT1           <-----------RAV1(1)            ----------->GT1       <---------TOE2(3)      <------NtERF2          <------------CBF        <---------TOE1(3)     ------>NtERF2 ---------->DOF2           <---- ---------->DOF2       <---------TOE2(3)  <-----------GT1--------->ANAC58             --------->AHL20(2)   gagaaaagagggaattgaaaaattttaggtgaaattagggtttttttctaatttgtggcaccaaaatcgagacaaagagcaaacaaaaaaaaatgactag  3331000                                                        ------->TEIL                --------->LBD16                                                      ------->GAMYB     --------->KAN4(2)                                                     <---------MYB52(2)--------->KAN4(1)                                                     --------->ANAC58  <----------TaMYB80                                                     --------->ANAC58 ---------->TaMYB80                                                --------->ANAC58      <---------ARR14(2)                                                --------->ANAC58      <---------KAN4(2)---------->DOF2         --------->AHL20(2)----------->GT1     --------->DAG2         --------->ARR14(2)        <---------AHL20(2) <----------ID1     ---------->DOF2      ----------->GT1 <---------HSFB2a(2)        --------->AHL20(2)----------->GT1  <---------ANAC46    ---------->DOF2     --------->HSFB2a(2)      --------->YAB1     --------->DAG2    ----------->GT1--------->TOE2(3)       <---------LBD16 -----------AtSPL8      ---------->DOF2 <------ZmHOX2a(1) --------->TOE1(3)    <----------DOF2   ggtaccaaaaataattttaaaaaacaaaaaggaaaaacgagaggagcgtaaagcaacgcaccttaaaaagggtatattcgtctttccggtaaagacacac  3331100               --------->O2               ----------->GT1               --------->ANAC58                                           --------->ARR11(3)               <---------ANAC46                               ------>ZmHOX2a(2)               --------->ANAC55(1)                       <---------WOX13(1)               <---------ANAC55(2) <------ZmHOX2a(2)   --------->ATHB12 <---------YAB1               --------->ANAC55(2)--------->ARR11(3)  <---------AHL20(2)<---------TOE2(3)               --------->ANAC58   <---------ARR11(3)  --------->AHL20(2)<---------TOE1(3)           <-----------HVH21 --------->TOE1(2)  <---------MYB52(1)  <-------GAMYB        ------>MYB83        --------->ANAC58   <---------RAP2.6(3) <---------MYB46(3)            <---        ------>MYB46(1)     --------->ANAC58<---------At4g35610    ----------->GT1            -------     --------->DEAR3(2)    ------->TEIL     --------->At4g35610  <---------MYB52(1) ----------->HVH21   tagcgataccgactgtcacgtaaaatacgaacccaagatcattttcagccgtaagattaattgatccgatggttaagatttagcgcttgacaatactcca  3331200            <---------ARR11(3)            --------->ARR11(3)           --------->CCA1(1)        <---------ICU4        <---------AHL20(2)                                                    <---------MYB52(2)       --------->AHL20(2)                                               --------->REM1(1)       <---------ATHB12    ----------->GT1                              --------->MYB46(3)     --------->YAB1--------->ANAC46       <---------ZAT2           --------->PCF2        --------->ARR14(2) --------->ZAT6    --------->ANAC58     <---------ZAT18           <---------PCF2         <---------ARR14(2) --------HVH21     --------->ANAC58     --------->ZAT18 <------ZmHOX2a(1)  --------->MYB46(3) -->ZAT14  --------->RVE1(1)--------->At5g28300  <----------DOF2  --------->ZAT18 --------->MYB46(3)   gtcacactaataaatatctccaagtaaaacggtgatacttagtgggctgggctttagaggacaacatgggccctacaaccactaacaaacaaatctccag  3331300                                                 <---------WRKY18(1)                     ------->TEIL                                                ----------->HVH21                      <---------ZAT14                                              <---------ANAC58                         --------->ZAT14                                            <---------AHL20(2)                       --------------->AtSPL8                                --------->AHL20(2)                                ----------->HVH21                            --------->AHL20(1)--------->ANAC55(2)                <---------MYB59                            <---------AHL20(2)<---------ANAC55(2)          --------------->AtSPL8            --------->ICU4  --------->AHL20(2)<---------ANAC58    <---------GLK1(2)--------->MYB52(1)       ----------->GT1------------------------>ANAC81        --------->ARR14(2) <---------At4g35610     ----------->GT1 ----------->GT1        <-----------GT1  <---------ARR14(2)------->TEIL<---------   tttagaaatgtgtaaaaattcgaaggaaaataaaataaaaacaaaattacttgacctcgaatggattcgattctctctctgtacctgactgtacttttaa  3331400  Previous    Next  AGI:  At3g10650.1    Description:  similar to nucleoporin-related [Arabidopsis thaliana] (TAIR:AT5G20200.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66025.1) Range:  from: 3325175    to: 3330897    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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