Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                --------->ZAT14                                                       <                              <---------ZAT14                          --------->At4g35610          -      <---------MYB52(2) <---------REM1(2)                             <---------At4g35610      <---- --------->ANAC58        <---------ZAT14                            ------>ZmHOX2a(1)         <------ --------->ANAC58        --------->ZAT14                           --------->TOE2(3)      --------->ZAT18 ----->YAB1         <---------ANAC46                           ---------->ID1             --------->ZAT14 -----YAB1     --------->ATHB12                            ------>ZmHOX2a(1)              <---------ZAT14   gacaaacaactatcgtctcattgggtctacactgttctctatacatttcaatcgctacctccttcgtctccttagctaaaccattccaaaactccactga  3322800                                                                                                  <--                                                                                               ------                                                                                               ------                                                                                  --------->At4g35610                                                                               <---------HSFC1(2) ---                                                                     --------->TOE2(2)         ------                                                                     --------->TOE1(2) <---------ZAT2    <------ZmHOX2a(2)                                               --------->ANAC58   <---------At4g35610   <---------ARR11(3)                                        ----------->GT1   --------->HSFC1(2)---- ---------HSFB2a(2)                                         ----------->GT1   ------>MYB46(1) ------- -------->HSFB2a(2)                                         <---------ZAT6    ------>MYB83    <------ -----GLK1(2)           <---------MYB46(3)         <-------GAMYB    --------->ANAC58   --------->At4g35610 ---ATHB12             <---------YAB1             <---------MYB46(3)<---------ANAC55(2)--------->ZAT2   ttctagatcaccatggtgctcgatggtgattcgaaatctagggtttgtgagatggttacgaagtgataaaacgtaagaccaagcttctgagctgtaacca  3322900                                        <------NtERF2                                     ------>NtERF2                                     <------NtERF2                                    <---------ANAC46                                    <---------RAP2.3(1)                                   <---------RAP2.3(2)                                  <---------ZAT14                                  --------->ZAT14 -------ALFIN1                    --------->SPL7                                          <---------YAB1 --->AtMYB61                     --------->ALFIN1                        --------->ARR14(2) --->ANAC46                 --------->ANAC58    --------->ZAT2           <---------ARR14(2) --------- ------>AtMYB61             --------->ANAC46    --------->At4g35610--------->ARR14(2)   --------->YAB1 ->GAMYB ---------->DOF2    --------->ANAC58   --------->GLK1(2)   <---------ARR14(2)   <---------ICU4 ----->MYB46(3)      --------->TOE2(3)<---------ANAC46          <---------ANAC46       <---------ATHB12 -->MYB46(3)         --------->YAB1<---------DEAR3(1)     <---------TOE2(3)      --------->GLK1(1) ---MYB55(2)    --------->ATERF1(1)<---------RAP2.6(2)    <---------TOE1(3)      <---------GLK1(1)<--   ccactcgagagaaaaggagccatccataacacgcagtgcggcgtagaagaagctggatttagggtttcggatttggatttgggagttccatcatgaaagc  3323000                                                                          <---------MYB52(1)                                        ----------->GT1                 ------>ZmHOX2a(2)                              --------->ZAT14                          <------ZmHOX2a(2) --------->ANAC58                              <---------ZAT14                        <---------GLK1(1)   --------->ANAC58 ->DOF2                       <-------TEIL                      --------->REM1(2)   --------->ANAC58 -------HSFB2a(2)          <---------MYB46(3)------->TEIL    <----------DOF2        --------->ANAC58   ctagaaggaattgaagatagctatagaagcggttcacagtgaaggtgaatctcagactttggactttgtagagatcggtatttgtgaagccaagtaagaa  3323100                                                                              <--------P                                                                              <---------WOX13(1)                                                                             <-------GAMYB                                                                           <---------AtMYB61                                                                          <---------MYB52(1)                                                                        <-----------RAV1(1)                                                                       ------>ZmHOX2a(2)                                                                     <---------AGP1                                                                     --------->ARR14(2)                                                                   ----------->ARR10                                                                <---------ANAC58      <--------------                                                    <---------AtLEC2 <---------ARR14(2)                    <------ZmHOX2a(2)    <---------ANAC46       <---------ANAC58   ------>ZmHOX2a(2)                   <---------ARR11(3)  <---------MYB46(3)   <---------ANAC58--------->MYB55(2)    ---  ---------->DOF2  --------->ARR11(3) <---------AtMYB61     <---------ANAC58<---------MYB46(3)    ---   tatcgaaagtagaaggaataagatcgatgaagagtagacgatggtggagaatttccatggtcgcttgcttcgatctggtggttgatccatcgatgaagac  3323200                                               <---------TGA1a                                               --------->TGA1a           ------------------------>ANAC81     <---------O2    <---------GLK1(2)          ===============================================bZIP_DOF          ---------->DOF2                      --------->O2    <---------ARR11(3) <---------TOE1(3)    ---------->DOF2                     =================bZIP_DOF    <---------AtLEC2 -------WRI1                            ---------->DOF2        --------->ARR11(3) <---------TOE2(3) ------>ANAC58  *TSS       <------ZmHOX2a(1)<----------ID1   <---------TOE2(3)   <---------DOF5.7(2) ------>ANAC58<----------ID1          <-------TEIL           <---------YAB1      <-----------GT1   agggaagaaagagaaagggacagagagaaggagagggagattcaaagcgacgagaggcccattaagattttggatggcccatttaacgttttttttggca  3323300                   <-----------GT1                     <---------ARR11(3)                --------->KAN4(2)                      --------->ARR11(3)               <---------HSFB2a(1)                 <---------YAB1                                ----               --------->HSFB2a(1)        <---------WOX13(1)                              ---------->DOF2           ----------->GT1             --------->ICU4 --------->GLK1(1)                --------->YAB1    --------->HSFB2a(2)                <---------YAB1 <---------GLK1(1)   <---------AHL20(2)---------    <---------HSFB2a(2)------>ZmHOX2a(1)--------->ATHB12                  --------->AHL20(2)---------   tatgttctgcaagtagaaaattctcctcatttgtgtttttgatgattgaaaatatgatatctgtgaaataagacaatttataaattcaatgagaaagcca  3323400                                                                                           --------->ARR14(2)                                                                                           --------->GLK1(2)                                                                                           <---------ARR14(2)                                                                                          <---------GLK1(2)                                                                                 --------->YAB1    --                                         <---------TOE2(3)                      --------->MYB46(3) <-   ----------->GT1                      --------->MYB52(1)    ---------->DOF2   <---------ATHB12  <-- ------>DOF2                            <-----------GT1    --------->AHL20(2)  --------->ANAC46  ---- >ANAC58  --------->YAB1           <---------ATHB12       --------->AHL20(2)  --------->WOX13(1)----- >ANAC58 <---------YAB1 <---------MYB52(1)        <---------TOE2(3)      --------->At4g35610   <-----   aaaggaggtttatcaaagtttaaaacgttatgcacaaatgaataacgatactaaggctaaataaaaaagcttagtagctccaatcaacaagagaatcgcc  3323500                                                                                                    -         --------->LBD16                                                                          ---        <---------LBD16        <---------ANAC46                                              ------->GAMYB       ------->GAMYB          <---------At4g35610                                            -------- ------->ARR14(2)             --------->ZAT2                          --------->TOE1(3)     <-------- --------ARR14(2)             <---------ZAT2       ------>ZmHOX2a(1)  --------->TOE2(3)     <-------- ----NtERF2           <-------PIF5           <-------TEIL            ----------->GT1        --------- ----->LBD16          ------->PIF5         --------->ARR14(2)   --------->YAB1             ------>MYB83 ---->ANAC46     --------->GLK1(2)         <---------ARR14(2)--------->WOX13(1)            -------->P ----LBD16--------->LBD16  <XXXXXXXXXXXXXXXXXXXMIR775    ----------->GT1  <-----------GT1  ------>MYB46(1)   ggaacttaaccccggagagaagctcgtggcactgctggtaatccaaattcgtcctcagcctgttaatcacatcgttaaacggtctcattagccaaccatc  3323600                                                                                               ------                                                                                               ------                                                                                               ------                                                                                             <-------                                                                                            <--------                                                                                      <------MYB46(1)                                                                                      <------MYB83      <---------ATHB12                                                              <--------P-------      <---------YAB1                                                <---------GLK1(1)<---------AtMYB61 ----------->GT1                                                    --------->GLK1(1)<---------MYB46(3) -------->DAG2                                       <---------At4g35610          <-----------RAV1(1) ------->DOF2                                    --------->TOE1(3)  <---------At4g35610  --------->At4g35610 ->YAB1--------->YAB1                           ----------->RAV1(2) --------->At4g35610  <---------At4g35610 -MYB55(2)                              ---------->DOF2         --------->ALFIN1  ------>ZmHOX2a(1)-- -ATHB12 <---------YAB1               --------->AHL20(2)       ------->MYC3       =================== >MYB46(3)                            <---------AHL20(2)       <-------MYC3     <---------ANAC46   --   aaaaggtaatcatacttgaagcatttcaaaattccaagaattaaaagttaacctgagctcttccatgtggagctccattgtgtcctgttggtgctgcagg  3323700  Previous    Next  AGI:  At3g10630.1    Description:  glycosyl transferase family 1 protein. similar to hypothetical protein [Vitis vinifera] (GB:CAN61336.1); contains InterPro domain Glycosyl transferase, group 1; (InterPro:IPR001296) Range:  from: 3321468    to: 3323216    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g10640.1    Description:  VPS60.1. similar to VPS60.2 [Arabidopsis thaliana] (TAIR:AT5G04850.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15822.1); contains InterPro domain Snf7; (InterPro:IPR005024) Range:  from: 3323315    to: 3325044    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version