Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                <---------ANAC46                                            <---------ZAT2                                            --------->At4g35610                                            --------->ZAT2            --------->ARR14(2)                                          ------->PIF5                <---------ARR11(3)                                          <-------PIF5                <---------ARR14(2)                                         <---------At4g35610          --------->ARR11(3)                                         <---------ZAT2           <------ZmHOX2a(1)   --------->ATHB12                  --------->ALFIN1       --------->At4g35610  --------->LBD16--------->ANAC58         --------->GLK1(1)               ----------->RAV1(2)<---------LBD16  --------->ANAC58       -         <---------GLK1(1)              ------>NtERF2      --------->SPL7   ------>MYB46(1)        <-   <---------ANAC58            --------->ANAC46          <-----------HVH21--------->AtMYB61      ----   <---------ANAC46            --------->ANAC58          <---------SPL7--------->CCA1(2)   <---------ANAC58   <---------ANAC58            --------->ANAC58   --------------------->WRI1------>MYB83   <---------ANAC58   atattgctgggatttctcaagtggagacacaacaagctatggcacctgctgtgtttggacgtcccgcaggaagataccaacgctaagtttattgggtttc  3319900         <---------ANAC46        <---------LBD16      <---------GLK1(1) <------MYB83     --------->ARR11(3) ----------->GT1                                        <---------ANAC58     <---------ARR11(3) <------MYB46(1)                              <---------TOE2(3)         <----- -------->YAB1         --------->MYB59                               <---------TOE1(3)         <----- --------ATHB12<---------TGA1a                                       <---------YAB1   <----------DOF2 ----->WOX13(1)<---------O2 --------->ATHB12                <----------DOF2    <---------ANAC58<-----   aatcaaagatttcggagacgagagtttggtttattggtctagtatggattcaacatcgtttcctttgatttaagattaatgtcgtttcctttgatttaag  3320000                                     <----------DOF2                        <---------ANAC58                                      ------------>CBF                        <---------ANAC58                                      <---------ATHB12      <---------HSFB2a(2)           --------->TOE2(3)                        --------->ANAC58      --------->HSFB2a(2)<----------DOF2                                     --------->ANAC58 ----TOE2(3)       <----------DOF2  <---------DAG2                        ------------>CBF ----YAB1  <-----------TBP       <-----------GT1               --------->ATHB12  <------------CBF ----TOE1(3)<---------AHL20(2)  <-----------GT1               <---------YAB1--------->WOX13(1)-------   attaatgtctggaatttatagcttttgctttgttttaacctttttttttggtccattttgaactatgatttggagttgcaatcaattgaaaacagcatgt  3320100                                                                              --------->ANAC55(1)                                                                              --------->ANAC58                                                                              --------->ANAC55(2)                                                                              --------->ANAC58                                                                              --------->ANAC46                                                                              <---------ANAC55(2)                                                                             ------->TEIL   <--------                                                                         --------------->AtSPL8                                                                         <---------------AtSPL3<-----                                                                  --------->REM1(2)       <---------ICU4                                                                  <---------ZAT14        <---------YAB1                                                                  --------->ZAT14        --------->ICU4                  <---------ANAC46                               --------->ALFIN1      --------->YAB1        ------------>CBF --------->ANAC58                        ----------------------->TaNAC69(2)   <---------CCA1(2)     --------->ANAC58                      <---------ANAC46       <-------TEIL -- ---->GT1  <------------CBF     --------->YAB1                 --------->ALFIN1    --------->ICU4<---   aattcatctcttcaattgttttgtggtaagaaaatgatatcaaaaacgttttctaaattccaagggtgtgtagtctttgtacgtaatattcatgatgagt  3320200                                         ----------->GT1                                      <---------ANAC55(2)                     -------->P                                      <---------ANAC58                        ------>MYB83                                 --------->LBD16                              ------>MYB46(1)                                --------->LBD16                             --------->DEAR3(1)                               --------->HSFB2a(2)                          <---------MYB59                               <---------HSFB2a(2)                          <---------MYB46(2)                         <---------AHL20(2)                                --------->DEAR3(2)                    --------->ICU4 --------->ARR14(2)                     ------->TEIL                   --------->ANAC55(2)<---------ANAC58                  <---------ZAT14         ------->GAMYB  --------->AHL20(2)                              <---------SPL7 -YAB1--------->MYB52(1)<---------AHL20(2)                              --------->ZAT14 ------HVH21  ----------->GT1 <---------LBD16               --------->ANAC58--------->MYB46(3) ------->At4g35610 <---------ANAC55(2)<---------ANAC46      --------->ANAC58<---------MYB111(1) --------RAV1(2)<---------MYB52(1) <---------ARR14(2)     <-----------------AGL1   caggggcataacggtccagttacttattaatttcccgaatacgtggaaaaataggttttggctcgaaatggcactgtaccgaccccttctcttgcatcat  3320300                                                                                                 <---                                                                                       --------->SPL7                                                                                      <---------MYB52(1)                                                                                     <---------RAP2.6(3)                                                                                    <---------ANAC46                                        --------->ANAC46                            <---------ANAC58                                 <-----------GT1              ----------->RAV1(2)   <---------ANAC58                           --------->ANAC58             <-----------GT1           ------>NtERF2  ----                           --------->ANAC46          <---------GLK1(2)           --------->DEAR3(1)                           --------->ANAC58      <------ZmHOX2a(2)      --------->TOE2(3)   <--------   ccaacttctccgtctgtaactacgtttctacgaaattacccctcgaaaccgatcaaattctccagcctgcccttccttcatcgctgccgtaagtctcggg  3320400                                                                     <------NtERF2                                                                     <---------At4g35610                                                                     --------->ATERF1(1)                                                                     --------->At4g35610                                                                    <---------SPL7                                                                  <------NtERF2                                                                  --------->ATERF1(1)                                                                 <---------RAP2.3(1)                                                                --------->ETT(1)                                                                <---------RAP2.3(3)                                                                <---------At1g77200                                                   <-------TEIL <---------DREB2C(2)                                                 <---------ARR14(2) ------>NtERF2                                                 --------->ARR14(2) <---------ATERF1(1)            <---------MYB52(1)             ------>ZmHOX2a(1)    <---------DEAR3(1)                  -        ------>ZmHOX2a(1)                ================================RAV                       <-     ------>ZmHOX2a(1)                   ----------->RAV1(2)    <---------DEAR4(1)                 --    <---------ALFIN1                    ------>ZmHOX2a(1)      --------->DDF1                --------  ------>ZmHOX2a(1)                --------->HSFB2a(1)         --------->RAP2.6(3)          --------- ------GLK1(1)                     <---------HSFB2a(1)       <-----------RAV1(1)           ---------- ----->GLK1(1)<---------DEAR3(1) <---------GLK1(2)--------->CCA1(2)<---------ANAC46     --------->HSFB2a(2) -LBD16<---------ALFIN1     <---------AtLEC2    <------ZmHOX2a(1)<---------ORA47(2)     <---------HSFB2a(2)   tctcctcctcctccgctcggtgttgttcttccatggaatctcctcctgaaggatacagaagaaatgtcggcgtctgcctcatgaattcttccaaaaaggt  3320500                                                                               <---------At5g28300                                                                              <-----------GT1                                                                         --------->ARR14(2)     <---------TOE2(3)                                                   <---------ARR14(2)      ----    --------->YAB1                                                       <---------ARR11(3)     <----  <---------WOX13(1)                                                     <---------GLK1(2)      <---- -------->ATHB12                                      ------>ZmHOX2a(1)  --------->ARR11(3)     <---- --------YAB1                               --------->ATHB12           ----------->ARR10       <----- ------->ICU4 --------->ATHB12             <---------YAB1            <---------ZAT14           ------ ->DAG2   ----------->GT1                  <---------ATHB12          <---------ZAT18         <------MYB83 >DAG2   <---------WOX13(1)              <---------At4g35610         --------->ZAT14         <------MYB46(1) >DOF2<---------YAB1      <---------GLK1(2)--------->ICU4            --------->ZAT18       <--------P   gatgattgatgatggataattggaaacagcttcttctattttccgatgattagctccttctcacaattaagtgcagattttcactgcctcgaggttggat  3320600       <---------ANAC58                              <-------TEIL       <---------ANAC58                             --------->CCA1(2)      <---------MYB46(3)                            --------->ARR14(1) ----->KAN4(2)                                     --------->ARR11(1)                       <-------- -----KAN4(1)                                      --------->ARR14(2)                     --------->GLK1(1) ------TaMYB80                                     <---------GLK1(2)                 --------->At4g35610 -----GLK1(1)                                      <---------ARR14(2)                <---------At4g35610 ----ARR14(2)          --------->ANAC55(2)       <---------YAB1             ------>ZmHOX2a(1) --->ARR14(2)        <-----------RAV1(2)   <---------ARR11(3)    <-----------GT1  ---------->DOF2----   attcccagtgcttggcaaatgcctcaggtaatctctagattccaatttcttaagattcgaattggtttctccattttcctcatacaaagctgaaatcaat  3320700                                      --------->TOE2(3)                                   --------->KAN4(2)                          <---------WRKY18(1)                            --------->HSFB2a(2)                        <---------WOX13(1)                               <---------HSFB2a(2)                        <----------DOF2                           <---------YAB1                       <---------ANAC58                         <---------ICU4                  <---- -ATHB12               <---------ANAC58                        --------->ICU4                -------- ----->YAB1     --------->YAB1    <---------KAN4(1)         <---------YAB1              --------->CCA1(2)   ggtactcacttgttcgcatcatactgcttgacttgaataatctcaaactcccaaaacaaaatttgattatgacttccaaaacaatggatgatacgaattc  3320800  Previous    Next  AGI:  At3g10610.1    Description:  40S ribosomal protein S17 (RPS17C). Identical to 40S ribosomal protein S17-3 (RPS17C) [Arabidopsis Thaliana] (GB:Q9SQZ1); similar to 40S ribosomal protein S17 (RPS17B) [Arabidopsis thaliana] (TAIR:AT2G05220.2); similar to 40S ribosomal protein S17 (RPS17B) [Arabidopsis thaliana] (TAIR:AT2G05220.1); similar to unknown [Populus trichocarpa] (GB:ABK93227.1); contains InterPro domain Ribosomal protein S17e; (InterPro:IPR001210) Range:  from: 3319032    to: 3320154    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g10620.1    Description:  diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase, putative. similar to diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase, putative [Arabidopsis thaliana] (TAIR:AT5G06340.1); similar to diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase [Lupinus angustifolius] (GB:AAC49902.1); contains InterPro domain NUDIX hydrolase, core; (InterPro:IPR000086); contains InterPro domain NUDIX; (InterPro:IPR015797) Range:  from: 3320268    to: 3321729    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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