Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         ---------->DOF2                                                                                    <------ZmHOX2a(2)                                                                                    =================                                                                                   <---------ARR14(2)                                                                                   <-----------ARR10                                                                                   --------->GLK1(2)                                                                                   --------->ARR14(2)                                                                                   --------->ARR11(3)                                                                                   <---------AGP1                                                                                   <---------ARR11(3)                                                                            ------>ZmHOX2a(2)                                                                            =============HOX2a_HOX2a                                                                           <------ZmHOX2a(2)                                                                           ==============HOX2a_HOX2a                                                                          <-----------ARR10                                                                          --------->ARR14(3)                                                                          --------->GLK1(2)                                                                          --------->ARR11(3)                                                                          <---------AGP1 <-----------                                                                          <---------ARR11(3)                                                                          --------->ARR14(2)                                                                          <---------ARR14(2)                                                                          <---------ARR14(3) <-------TEIL                         --------->ZAT14                                 <------ZmHOX2a(1) <---------                --------->ANAC58                                         ==================HOX2a_HOX2a -----YAB1      --------->ANAC58                                         ===================HOX2a_HOX2a -->YAB1        --------->ANAC46                                   <---------ARR14(2)  ============== ---ICU4      --------->ZAT6        ---------->DOF2                --------->ARR14(2)------>ZmHOX2a(2) --YAB1    --------->YAB1<---------ZAT14<----------ID1           <------NtERF2    <------ZmHOX2a(1) ->ICU4 --------->WOX13(1)   ---------->DOF2                   ----------------->AGL1================   cacagactatctatcaacactcaacagtatacaaagttgaaagggacaaataaactgactggagggccgaatcgaggatcttgaggatctaaaggtacaa  3234900              <---------TGA1a              <---------O2              --------->O2              --------->TGA1a              =================bZIP_DOF          --------->TOE2(3)     --------->HSFC1(2)     --------->HSFB2a(1)     <---------HSFB2a(1)                                                                     <-------   <---------GLK1(2)<----------DOF2                                                 <---------ANAC46 =================HOX2a_HOX2a                                                      --------->ALFIN1 ----AtSPL8------>ZmHOX2a(1)                                                     <---------ANAC58 -ID1<---------HSFC1(2)  <---------GLK1(2)                   <---------ANAC58    <---------ANAC58 =======================bZIP_DOF   <---------At4g35610       <---------ANAC58    <---------ANAC46 <-- =================HOX2a_HOX2a      --------->At4g35610  <----------DOF2<----------DOF2  ----------->ARR10   acttggaatcttcctcaagtgtctttggaatctcttgagctgaatttctaacacatagcttttgcttcttgagctttgtgtttgtgtggtgagatttact  3235000                                                            <---------ARR14(2)                                                            --------->ARR14(2)                       <---------MYB52(2)                <---------ANAC46                  --------->ANAC58                       <---------ANAC55(2)                  ----------->GT1                        --------->ANAC55(2)                  --------->ANAC55(1)             --------->TOE2(3)                  <---------ANAC55(2)       --------->ARR11(3)                  --------->ANAC55(2)       <---------ARR11(3)                  --------->ANAC58        ----------->ARR10 ------->TEIL                  --------->ANAC46 --------->CCA1(2)    <-------TEIL ----GT1  ---------->DOF2     ---------->DOF2--------->At4g35610                         <---------TOE2(3) --------DOF2    <-----------------------TaNAC69(2)------>ZmHOX2a(1)                 <----------DOF2   ctttgtccataacaaagaagacgtaactagcccaaagatgcgagaagagcttcctaagtacgtatatgaagatgatgaagaagttggctttgagattgca  3235100                                                                                                 ----                                                                                                 <---                                                                                                -----                                                                                                <----                                                                                                -----                                                     <---------ANAC46               <---------ICU4                                          <---------CCA1(2)                         --------->YAB1                                  ------>ZmHOX2a(1)  <---------ANAC58              <---------ATHB12                             ---------->ARF1         <---------ANAC58     <---------REM1(1)     =====   --------->MYB52(1)        ---------->ID1   <---------CCA1(2)--------->AHL20(2)--------->WOX13(1)<-   gaccccaacgaagaaatcgacattgctccttgtctcctaatctcatctctatcttgcttgttagataaaatcgttcatgtagccaatcatgttttgccat  3235200      ------->TEIL      <-------TEIL  --------------->AtSPL8  <---------------AtSPL8 <---------ANAC46 --->MYC3 ----MYC3                                       -------->P ---->O2                                        ------>MYB46(1) -----O2  ---------->DOF2                  --------->ANAC58 ---->TGA1a                                --------->ANAC58          --------->ANAC46         *TSS ====================bZIP_DOF      <---------YAB1       <----------DOF2                      <------- ----------HVH21              <---------ICU4    ------>MYB83   ----------->GT1   <---------TOE2(3)  -   gtgtcatgtacataaaccgcatcaaaacctgttcattactcttgcaagcctacctcggctttattttgtataaacaacgttttaagttttgttttataca  3235300                                                <---------YAB1                                             <---------YAB1                                           -------->ATHB1                                           --------->ATHB51                                           <---------AHL20(2)                                           -------->HAHB4                                           <--------HAHB4                                           <---------ICU4                                           --------->YAB1                                          --------->ICU4                                          <---------ATHB51                --------->AHL20(2)                                          <---------YAB1      --------->ZAT2                                        <---------ICU4        <---------At4g35610           <--------       <---------LBD16                 --------->ICU4         <---------ZAT2         <------------CBF  <---------MYB52(1)              <---------ANAC58            --------->At4g35610----------------->AGL1 ----GT1      <---------MYB52(2)  <---------ANAC46          <-----------RAV1(2)<-----------GT1 ---------->GT1   --------->YAB1  <---------ANAC58        <-----------HVH21<---------AHL20(2)--------   tttcgttatttcggaaacaaacatagataacacatttcgtagtaattattatgtttttggtgtcagcagagtttgattttataacgaaattgggcaaccc  3235400                                                                                                 ----                                                                                                 ----                    <---------YAB1                                                    <----------DOF2          ------->TEIL                                                               <----------DOF2          <---------ARR11(1)                                                         <---------DAG2          <---------ARR11(3)                                                       ------>NtERF2 ----         <---------CCA1(2)                                                      <---------At4g35610   --------->ARR14(2)                              <-----------HVH21       <---------YAB1        ---- -ATERF1(1)  <----------DOF2            <---------HSFB2a(2)    <---------ALFIN1 --------->At4g35610 >P<---------ARR14(2)           <------ZmHOX2a(2)  --------->TOE2(3)  <------------------------ANAC81   ctacatatactgtatctttcttatgacttatgagatcaaattacagaagaaaacgtcaattgctcacacattgttttatgtttgctgccttttgttttca  3235500                                                              <-----------HVH21                                                             ------->GAMYB                                                     <---------At4g35610      ---------->DOF2                    ------>ZmHOX2a(1)  --------->MYB46(3)   ------->GAMYB                     --------->ARR14(2)   ----------->RAV1(1)                    ----  --------->ANAC58                   <---------ARR14(2) --------->At4g35610                <---------  --------->ANAC58              -------->P           --------->At4g35610                --------->ARR14(2) ----->ANAC58               --------->ANAC46      --------->LBD16                       <---------ARR14(2) ----->ANAC46           ----------->RAV1(2)     ----------->RAV1(2)                ----------->GT1 ----->ANAC58           <---------At4g35610     ======================RAV      <---------HSFB2a(2) ----->AtLEC2           --------->At4g35610   ------>ZmHOX2a(1)                --------->HSFB2a(2)   tgcaacgcaaaagaagatgtgatcacatctgagcaaccagttcctctcctccctgagcagcaacagtcacagtagcatcttcgataagtgaattctccat  3235600                                                                 ====================================                                                                 <---------TGA1a                                                                 ----------->RAV1(2)                                                                 --------->ZAT2                                                           <-----------ARR10                                                          <---------CCA1(2)                                                          <---------At4g35610                                                         ------->TEIL                             <--                                <------MYB83          ------>ZmHOX2a(1)                         <----                        <----------DOF2             <---------ANAC46                  --------->YAB1                      <---------At4g35610           <---------ANAC58                 <---------ATHB12                      --------->At4g35610           <---------ANAC58         <---------YAB1     <---- ----->MYB46(3)      ------->TEIL               ------->MYC3     <---------ZAT2  --------->AHL20(2) --GT1        <---------YAB1    <------MYB46(1) <-------MYC3     --------->TGA1a <---------AHL20(2)   ccatcgcttcagcattttcaatgcagctttaggctggtccattggaaccatgtgtcctgcatctctcacctgtgtttttatgtttaaatcatcaaaccct  3235700                                                                     ------>NtERF2         --------->ANAC55(2)                                  ---------->DOF2         <---------ANAC55(2)                  <-------GAMYB --------->ANAC58   <---------ARR14(2)       <-----------GT1                       <---------MYB46(3)      <---------RAP2.6(3) ======bZIP_DOF                          --------->MYB46(3) --------->ANAC58  <------ZmHOX2a(1) ---------RAV1(1)                    <---------MYB52(2) <---------YAB1      <---------TOE2(3) -----MYB52(1)                     ---------->DOF2<---------YAB1    --------->DEAR3(1)              < ------DOF2      --------->YAB1   --------->TOE1(2)  <---------YAB1 --------->RAP2.6(2) <---------MYB46(3)   ttgttgttgttacatactataagaaaaccagtagaaccaaagaacgactgttgttattatgcaagaaaggccgaccttgaggaaactgagttgttcataa  3235800  Previous    Next  AGI:  At3g10405.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO68898.1) Range:  from: 3233720    to: 3235294    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g10410.1    Description:  SCPL49 (serine carboxypeptidase-like 49); serine carboxypeptidase. Identical to Serine carboxypeptidase-like 49 precursor (SCPL49) [Arabidopsis Thaliana] (GB:P32826;GB:Q42107;GB:Q9CAE5); similar to SCPL48 (serine carboxypeptidase-like 48), serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT3G45010.1); similar to SCPL47 (serine carboxypeptidase-like 47), serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT5G22980.1); similar to serine carboxypeptidase precursor [Matricaria chamomilla] (GB:AAD42963.2); similar to carboxypeptidase type III [Theobroma cacao] (GB:CAC86383.1); similar to putative serine carboxypeptidase precursor [Gossypium Range:  from: 3235296    to: 3238118    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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