Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   -------->HAHB4                                                                 --------->YAB1                                                                --------->ICU4                                                              --------->YAB1                                                              <---------ICU4                                                              -------->HAHB4                                                             <---------ATHB51                                                             <---------ATHB12                                                        --------->YAB1          --------->At5g28300                          --------->ZAT6   --------->ANAC46                                --------->AHL20(2)   --------->AHL20(2) <-----------------AG                    <---------ANAC58    --------->ICU4 <-----------------AGL1      --------->AHL20(2)  <----------DOF2<---------YAB1   --------->MYB59 ----------GT1       --------->AHL20(2)  <---------ANAC58  --------->YAB1   <---------AHL20(2)   aataccctctacggtaatagcattaaaacaaatatttagtatggcttaactcttttaatactaataatgatcaaatatttagttatgtcttactgactat  3216000                                                                                               <-----                                                                                           --------->AHL20(2)                                                                                           <---------AHL20(2)                                                                                           --------->ATHB51                                                                                           <---------ICU4                                                                                          <---------YAB1                                <-------TEIL                                            <---------ICU4                               --------->CCA1(2)                                        --------->YAB1                              <---------ARR14(2)                                       <---------AHL20(2)                --------->YAB1<---------GLK1(2)                            --------------->AGL15                --------->TOE2(3)   <---------TOE1(2)                      ==========================               <---------ATHB12--------->ARR14(1)                        ------>ZmHOX2a(1)--------->ICU4      <---------ICU4          --------->ARR14(2)                     <---------ARR14(2)--------->ICU4  ------>ZmHOX2a(1)           --------->ARR11(1)                     --------->ARR14(2)<---------ATHB51 --------->TOE2(3)          ----------->ARR10 --------->ARR11(3)    <---------GLK1(1)  --------->AHL20(2)   attcctaaacatttccaatcttaagagagcaagattcgcacattttaagaactagcaaaaactcacttgcaaatcctccatattttgaaataattatttt  3216100                                <-----------GT1                           <---------AHL20(2)                           --------->AHL20(2)                           --------->AHL20(1)     <---------YAB1        <---------AHL20(1)     <---------AHL20(2)   <---------AHL20(2)                                       <---------------AtSPL8  <---------AHL20(2)      --------->AHL20(2)               --------------->AGL15   --------------->AtSPL8 --------->AHL20(2)   <---------AHL20(2)                  --------->TOE2(3)       <---------ANAC46 ------GT1  <---------MYB52(1) --------->AHL20(2)      <<<<<<<<<<GT-3b    --------->ZAT6 ==========================================================================MADS_MADS                <   caattttataatttgttagtctagtttattaaattaactcgcacaaattacttctatttttcttaaaaaatcaaaaacactattgtttgtacaaaacagt  3216200                                              --------->ANAC58                                              --------->ANAC58                                              --------->ANAC46                                           --------->ZAT14                                           <---------ZAT18             --------->GLK1(1)                                         --------->At4g35610           <---------GLK1(1)                                         <---------At4g35610       --------->ANAC58                --                                --------->RVE1(1)                  --------->ANAC46               ---                               <---------ARR11(3)                  --------->ANAC58             -----               ---------->DOF2 --------->ARR11(3)                 <---------LBD16               -----    --------->YAB1             --------->GLK1(2)           ------>ZmHOX2a(1)                  ------- ---------AHL20(2)      --------->YAB1   ------>NtERF2    --------->TOE2(3)                   <------   ttttaatcaaaaacttacaaagcctataagaaaaatctcttgcagcccactcaaaccattccttagaactcggaactctctattcatatgaaatgaccaa  3216300       --------->TGA1a       --------->O2       --------->ANAC46       =================MYC_MYB       --------->bZIP60(2)       ==================================bZIP_DOF     <---------ALFIN1<---------------AGL15 ------>MYB83        --------------->AGL15 ------>MYB46(1)    <-----------------AGL3 ------->AtMYB61    <-----------------AGL2             <---------AHL20(2) ------>MYB46(3)    ----------------->AGL3             --------->AHL20(2)                     ------- ->MYB83 --------->ZAT14                          --------->At5g28300                         <------ ->MYB46(1)         ================================================================================= -->AtMYB61    -------->P                ----------->GT1                                     -------- ---MYB59<---------ZAT14      ---------->DOF2    ----------->GT1         *TSS       --------->GLK1(1)   accatccccacttcacttaccttctatgtatggaaagttgtgagggtgaaacagtaatttaaaacgatatagtttccattacagagatttctatttccat  3216400                 <---------ICU4                 <--------HAHB4              --------->WOX13(1)           --------->ANAC58           --------->ANAC58                 ------>ZmHOX2a(2)               --------->MYB46(3)           --------->ANAC46 <<<<<<<<<TBF1 <---------ARR11(3)               --------->ANAC58      <---------YAB1     <<<<<<<<<TBF1  <---------YAB1                     --------->ANAC46 -------->AGL15  --------->YAB1         <---------ATHB12      ------->GAMYB--------->ANAC58 ---------AGL15 <---------ATHB12       <---------TOE1(2)     --------->ANAC46 ==========MADS_MADS   XXXXXXXXXXXXXXXXXXXX>MIR838           --------->ANAC58 --------->AGL3 --------->ICU4   <----------DOF2             --------->ANAC58                  ------   tttttgatatcattcgcaatcattttcttcttcttctttcccatgatcgtctctcgcttcccaacgcaatcttcttcacccaatctctaaatctctccta  3216500                                             <---------RAP2.6(3)                                             --------->LBD16                                             --------->At5g28300                                            --------->RAP2.6(2)       <------NtERF2                                          ------>NtERF2               --------->ATERF1(1)                                        --------->ATERF1(1)          <---------At4g35610                                       --------->ZAT2                --------->At4g35610                                       <---------ATERF1(1)          <---------ANAC46                                       <---------At4g35610        <---------ATERF1(1)                                       <---------ZAT2             ------>NtERF2               <------                                       --------->At4g35610        <---------ERF1              <------                                      --------->ARR14(2)          --------->ABI4(2)          <-------                                      <---------ARR14(2)         --------->ALFIN1        --------->MYB55(2)                                     <------NtERF2               <---------DEAR3(1)      <---------DEAR3(2)                                    --------->LBD16             <---------MYB52(1)       <---------MYB46(3)                                  <---------LBD16     ------>NtERF2<------NtERF2         --------->MYB52(2)                                 ------>NtERF2        --------->At4g35610    ----------->RAV1(2)-----                                 --------->MYB52(1)   <---------At4g35610 <---------ETT(2) <---------MYB52(1)                              --------->ZAT2--------->ANAC55(2)--------->LBD16          <---------DEAR3(1)                              <---------At4g35610   <---------RAP2.6(2)   --------->ETT(2)<-------GAMYB                              --------->At4g35610<---------WOX13(1)--------->ATERF1(1) <---------MYB52(1) >ZmHOX2a(1)              <---------MYB52(1)<---------ANAC46 <---------LBD16-------->P<-----------HVH21   aattccatgtctctcgcttccattcgccgtttagctgccggagctgccgtaattgccgctgcatccggtggcgctgtctacctgtctccgtcggttgcct  3216600                            --------->ARR14(1)                           <---------ARR14(2)                XXXXXXXXXXXXXXXXXXXX>MIR826    <------MYB83                --------->PCF5          <------NtERF2               <---------SPL7           --------->ATERF1(1)                                 ---------     ---------->DOF2       <---------GLK1(2)<---------ANAC58       ------->TEIL             <--------  ----------->RAV1(1)--------->GLK1(2) <---------SPL7------>ZmHOX2a(2)          --------->At4g35610 ----------->HVH21  <---------GLK1(2) <---------ANAC46    <---------ALFIN1    ------>ZmHOX2a(2) ---ANAC58    <---------MYB46(3)      <---------ANAC58    --------->DEAR3(1)<---------ARR14(2)   ---- ---ANAC58   --------->ALFIN1<-------TEIL   <---------ANAC58     <---------ZAT14<---------At4g35610<- --ATERF1(1) <---------AtMYB61        <---------ANAC58 <---------ALFIN1     --------->ARR14(2)  <---- ->NtERF2 --------->ALFIN1 --------->ARR14(2)  <------MYB46(1)<------------------SPL14      <--------   ccagcgacaaaggaggtggtccgattctagattcgttgaggcgtaggcttggtgatcccaccgcttctgtaccgtctcgatctgctcaagagtctgctct  3216700                                                                                               ------                                                                                              <------                                                                                              <------                                                                                              <------                                                                                          <---------ANAC58                                                                                          --------->ATERF1(1)                                                     <------NtERF2                        <---------ANAC58                                                    --------->MYB52(1)                <-------MYC2                                                   --------->DEAR3(1)                 ------->MYC3                                                  --------->MYB46(3)                  <-------PIF5         <---------ALFIN1                         <---------ABI4(2)                   -------->ABF1         --------->DEAR3(1)                      <---------ATERF1(1)                  <-------MYC3        <------NtERF2                           --------->TCP16(1)                    ------->MYC2      --------->DEAR3(1)                        --------->TCP20                       ------->MYC4      <---------ALFIN1                        --------->ABI4(2)                       <-------MYC4     <---------ABI4(2)                       --------->ALFIN1                         ------->PIF5  <     --------->ATERF1(1)                    <------NtERF2<---------ARR14(2)          ================     --------->MYB46(3)                     --------->ATERF1(1)                      <---------TGA1a<     <---------MYB55(2)                     <-------GAMYB--------->ARR14(2)          <---------O2  <-    ------>NtERF2                          <---------MYB46(3)                        --------->ANAC46    <---------At4g35610                   <---------ANAC46  <---------HSFB2a(2)      --------->TGA1a< >At4g35610                       <-----------HVH21<---------ALFIN1                  --------->O2 <-- -At4g35610        ------>ZmHOX2a(2)      <---------DREB2C(2)                        --------->ANAC55(2) ----->ATHB12    <---------ARR14(2)       <---------RAP2.6(2)                    ----------------->PIF3(1) --------WOX13(1)--------->ARR14(2) --------->ATHB12------>NtERF2                <-----------------PIF3(1) -----YAB1   <---------At4g35610  <-----------TGA1--------->ATERF1(1)   ----------->HVH21<---------ATERF1(1) -ZAT14------>NtERF2 --------->At4g35610  <---------DEAR3(1)--------->HSFB2a(2)<-----------HVH21-----   gattgcagccaccgcttctgatccgctcgatgttctcgtcattggcggtggagccaccggttctggagttgctcttgacgctgttacacgtggcctccgt  3216800       --------->ALFIN1     <------MYB46(1)     <---------ANAC46     <------MYB83    --------->MYB111(2)    --------->MYB46(2)    --------->MYB111(1)    <---------AtMYB61    --------->MYB55(2)    <---------MYB46(3) --->LBD16                   <---------HSFB2a(2) ---ANAC58                   --------->HSFB2a(2)           <-------TEIL ---ANAC46                  <---------LBD16          <---------At4g35610 ---ANAC58                 =========================HOX2a_HOX2a           <---------AHL20(2)       <- ------MYB46(1)            ----------->RAV1(2)    ---------->DOF2         --------->AHL20(2)     <--- ======MYC_MYB             ------>ZmHOX2a(1) <------ZmHOX2a(2)         <----------DOF2           <--- ---------MYB46(3)  <---------GLK1(1)       --------->ARR14(2)       <-------TEIL                <--- --------AtMYB61    --------->GLK1(1)       <---------ARR11(3)   --------------->AtSPL3          <--- ------MYB83       <---------ARR14(2)    <---------HSFB2a(2)     <---------------AtSPL3          <--- ------P          <------ZmHOX2a(1)      --------->HSFB2a(2)     <---------------AtSPL8     <-------- ---->ALFIN1      ==================================HOX2a_HOX2a  --------------->AtSPL8<-----------GT1   gttggtttggtggagcgcgaggatttctcctctgggacttcttcgcgatctacaaagctgattcatggaggtacttttaatttttgaattttctatgtgg  3216900  Previous    Next  AGI:  At3g10370.1    Description:  glycerol-3-phosphate dehydrogenase, putative. similar to unnamed protein product [Vitis vinifera] (GB:CAO68906.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ80918.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81960.1); contains InterPro domain FAD-dependent glycerol-3-phosphate dehydrogenase; (InterPro:IPR000447); contains InterPro domain FAD dependent oxidoreductase; (InterPro:IPR006076) Range:  from: 3216373    to: 3219275    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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