Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              <---------ARR14(2)                 <-----------GT1     ------>ZmHOX2a(1)        --------->AHL20(2)  --------->ARR14(2)       <---------YAB1   ------>ZmHOX2a(1)       <---------AHL20(2) ---------->DOF2    <---------ARR11(3) --------->TOE2(3)<---------WOX13(1) -----GLK1(1)  <-----------GT1      <---------MYB59                                             <---- ---->DOF2  <---------AHL20(2)     ----------------->AG     <---------GLK1(1)            <---------WOX13(1) >HSFB2a(2) --------->AHL20(2)    <-----------------AGL1    --------->CCA1(2)         <---------YAB1 -HSFB2a(2)<---------AHL20(2)    <---------MYB52(1)        <---------ARR11(3)         <---------TOE2(3)   agcctggatattatttatttcacttcctaaaatccgttcctaattggtattttgagagcatgatatgcgatatatgtcttacaatattgagattgctaat  3199400                                                                   <---------ANAC58                                                                   <---------ANAC58                                                                   <---------ANAC46                                                                 <---------ANAC58                                                                 <------MYB83                                                                 <---------ANAC46                                                                 <------MYB46(1)                                                                 <---------ANAC58                ----                                                  <---------ARR14(2)                     <-------MYC3                                            <---------CCA1(2)   --------->MYB46(2)       ------->MYC3                                          <---------ANAC58      --------->MYB111(1)     --------->TGA1a                                   ---------->DOF2--------->ARR14(2)      <---------YAB1--------->O2                          <---------YAB1  <---------ANAC58      <---------AtMYB61       <---------O2             --------->MYB59<---------AHL20(2) --------->YAB1   <---------MYB46(3)      <---------TGA1a -----WOX13(1)          <---------AHL20(2)<---------ANAC46    <---------MYB52(1) ----------->HVH21   tggtatttgcctagttatgtccatgtttatttttatccaaagttgtgtatcatatactgtgtctgtttggtgtgttatgacttatgacccatgtgtgata  3199500                                                                                                 <---                                                                                                 ----                                       ---------->DOF2                                          <----                                  ------->TEIL       --------->ATHB12                          <-----                            <-------TEIL             <--------HAHB4                          --------       <---------SPL7    <---------ANAC46----------->GT1                                  --------->ALFIN1 ----->GLK1(2) <---------SPL7<---------AtLEC2      --------->GLK1(2)                      <---------MYB52(1)   atctcatgtggtatggccgtatggatgatgtgcatgaacataaaagtaaaaagaatcatttagagacccaaaacaatatagggcttcaaaacgttgggcc  3199600                                                                                                  ---                                                                                                 ----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                -----                                                                                                -----                                                                                                -----                                                                                                <----                                                                                                -----                                                                                               ======                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                               ======                                                                                               <-----                                                                                      <---------ICU4                                                                                     <---------YAB1                                                                                     ------>ZmHOX2a(1)  --------->MYB52(2)                                                             --------->ARR14(2) ---NtERF2        --------->YAB1                                              <------NtERF2    ------ ----->LBD16     <---------YAB1                                              <-----------HVH21<------ -----ANAC46 ----------------->AGL2                                         --------->DEAR3(1)------- ----LBD16   ----------------->AGL3                             --------->WOX13(1)<------ZmHOX2a(2) < ->TCP20   <---------ZAT18                      --------->MYB46(3) --------->YAB1<---------ARR14(2)--   gggtttgtttcagagccctattatagatagatgggtctgaagaagtctgaacaaacaaaaacatgtctatcatattagccgtcgatcctcattagacacg  3199700   <-------GAMYB  ----------->GT1  <---------DEAR3(2)  <---------MYB46(3) <---------DEAR3(1) ------>WRKY12 ----->ALFIN1 ---MYC2 ---MYC3 ---MYC4 -->MYC2 -->MYC3 -->MYC4 ---PIF5 -->PIF5                                                  ---------->DOF2 ==========MYC_MYB                                      ------------------------>ANAC81 --->TGA1a                                            ---------->DOF2 ----ANAC46                                       --------->LBD16 ----ANAC55(2)                                   <---------HSFB2a(2) ----TGA1a                --------->ARR14(2)     --------->HSFB2a(2) ===========MYC_MYB    <------MYB83             <---------LBD16 ----O2          ------>NtERF2                  <---------ANAC46 --->O2        ----------------->AGL1          <---------LBD16                                     <- -----------------TaNAC69(2)                 <----------DOF2                              ----------- ----->OsbHLH66<-----------------AGL1       ------>ZmHOX2a(2)                            --------->DAG2 ---------ORA47(1)     <------MYB46(1)    <---------ARR11(3)               *TSS         ---------->DOF2 ---------->AtMYB77   --------->MYB59     --------->ARR11(3)   ---------->DOF2  <---------ATHB12   --   tggacggttgatatactgccgagttcggtatcgtcgcaaattttgatctttcgggaaaaagaaagaaaagagaagaaaacaaatcgttgaaaaagtaagt  3199800                <------ZmHOX2a(1)            <---------O2            <---------ANAC46                                               --------->DAG2         <------NtERF2                  <-----------GT1                   --------->DAG2         ----------->HVH21      >>>>>>>>>TBF1  <----------DOF2      ----------->GT1 --------At4g35610           >>>>>>>>>TBF1  --------->GLK1(2)     <---------ATHB12  <---------ANAC58 >GT1   ------>NtERF2<----------ID1  ----------->GT1     ---------->DOF2 ---------->DOF2         ---- ------->At4g35610 ---------->DOF2 ---------->DOF2      --------->YAB1<---------ZAT6<---------ANAC58   aagctcaaggcgcgacgaggaaaaagacgaagaagaagaaagtaacaatctttagtaatcaaagtccaattagtgaaaaggggttttcttgtgagaagag  3199900                                                                             <-------TEIL                                                                            --------->CCA1(2)                  -------------->OsCBT                     <---------WRKY18(1)                <---------ANAC46                        --------------------->WRI1                <---------bZIP60(2)                   <---------ANAC46     <---------ARR14(2)               <-----------------------TaNAC69(2)     <---------YAB1       --------->ARR14(2)             ----------->TGA1                     <-------GAMYB         <------NtERF2               <         <---------YAB1                          <---------MYB46(3)    --------->LBD16              <       --------->CCA1(2)                        <---------TOE2(2)     --------->DEAR3(1)      <------    --------->ANAC58                         --------->ANAC46        <---------LBD16         --------    --------->ANAC58                         --------->ANAC58       --------->LBD16          <-------    --------->GLK1(2)                        --------->ANAC58       ------>NtERF2<---------MYB52(1) < ------>DOF2 ----------->HVH21              <---------LBD16<-----------GT1--------->GLK1(1) ---------   aaagagaagctatgagtgacgcgttttgttcggactgtaagaggcacacggaggttgtgtttgaccattccgccggagatacagtttgttcagagtgtgg  3200000                                                                                                  ---                                                                                        <---------MYB46(3)                                                                                       <---------AtMYB61                                                                                       --------->ALFIN1                                                                         ============================                                                                       --------->ARR11(3)  --------->SPL7                                                                       <---------ARR11(3)<---------SPL7                                                                      --------->YAB1  <-------GAMYB                                                                     --------->ICU4  <---------DEAR3(2)                                                                     <---------YAB1 <---------DEAR4(1)               --------->ANAC46                                    <---------ICU4   <---------DEAR3(1)               --------->ANAC58                                    --------->YAB1   <---------ANAC46    <---------ANAC58                         <----------DOF2      --------->ICU4    <---------At1g77200    <---------ANAC58                     <---------ZAT18        --------->YAB1      <---------DREB2C(2) ---------ANAC58                         <---------SPL7      <---------At4g35610  <-----------HVH21 ---------ANAC46                        <---------ANAC58     ----------->GT1     <-----------RAV1(1) ---AtMYB61    --------->ANAC58         <---------ANAC58     --------->LBD16   <---------ANAC58   <-- ->ZAT14 ------->TEIL                   <---------ANAC46   --------->ZAT18     <---------ANAC58   --- --ZAT14<---------CCA1(2)        <---------YAB1            <---------LBD16 ------>ZmHOX2a(1)--------- ---------ANAC58    <---------ATHB12 --------->ALFIN1 <---------ATHB12-------->HAHB4--------->ETT(1) >ALFIN1<---------GLK1(2)  ------->TEIL<-----------------------TaNAC69(2)------>ZmHOX2a(2)--------->PCF5   tctcgtgcttgaatctcactcaatcgatgaaacttctgagtggcgtactttcgctaatgagtccggtgataatgatcctgttcgtgtcggtggtccgacg  3200100                                                      ----------->RAV1(2)                                                      ------>ZmHOX2a(1)                                                    ------>ZmHOX2a(2)                                                    ======================HOX2a_HOX2a                                                   =======================HOX2a_HOX2a    <----------DOF2                                <------ZmHOX2a(2)  ------>ZmHOX2a(1)                               <---------ARR14(2)                            <---- --------------->AGL15                            ------->TEIL                                ------- ---->TEIL    <---------AtMYB61              ------>MYB46(1)                                 <------- ========HOX2a_HOX2a       --------->ZAT14   ------>MYB83     <---------GLK1(1)              -------- -------ARR14(2)       --------->ZAT6        --------->MYB52(1)    ------>ZmHOX2a(1)         <------- ------>ARR14(2) <---------AtMYB61         <---------MYB59    --------->GLK1(1)     --------->ETT(2)< -->HVH21<---------At4g35610  <-----------HVH21   --------->ARR14(2)                <---------MYB46(3)   aatcctcttttagcagatggtggtctcactactgtcatttctaaacctaatggatcctctggcgatttcctctcttcttctcttggtcgatggcagaatc  3200200          ------>ZmHOX2a(1)   ==============HOX2a_HOX2a   ------>ZmHOX2a(2) <---------ARR11(3) <---------ARR14(2) <-----------ARR10 --------->ARR11(3) <---------AGP1 --------->ARR14(2)           <---------ANAC58                       <-----------GT1 -----ANAC46                  <---------ANAC58                  --------->MYB52(2) -->GLK1(2)                   <---------ANAC46                 <-------TEIL --GLK1(2)<---------YAB1 <-----------RAV1(1)                <------MYB46(1) ->ARR14(2)             <---------YAB1                      <------MYB83 --ARR14(2)   ------>ZmHOX2a(2)<----------DOF2         ----------->HVH21 ---------CCA1(2)   <----------DOF2                   <---------ANAC46   gtggatctaatcctgatcgtggccttattgttgctttcaagactatcgctaccatggctgataggttcgtttttcgattctagggtttgttttttaagcc  3200300  Previous    Next  AGI:  At3g10330.1    Description:  transcription initiation factor IIB-2 / general transcription factor TFIIB-2 (TFIIB2). Identical to Transcription initiation factor IIB-2 (TFIIB2) [Arabidopsis Thaliana] (GB:Q9SS44;GB:P92972); similar to TFIIB (TRANSCRIPTION FACTOR II B), RNA polymerase II transcription factor [Arabidopsis thaliana] (TAIR:AT2G41630.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23618.1); contains InterPro domain Cyclin (InterPro:IPR006670); contains InterPro domain Transcription factor TFIIB related; (InterPro:IPR000812); contains InterPro domain Zinc finger, TFIIB-type; (InterPro:IPR013137); contains InterPro domain Cyclin-related (InterPro: Range:  from: 3199775    to: 3201860    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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