Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               ---------->DOF2                                         <------ZmHOX2a(1)                                   <---------At4g35610                                   --------->ZAT2    --------->ANAC58                   <--------P      <---------ZAT2    --------->ANAC58          --------->ZAT14          --------->At4g35610           --------->CCA1(2)          <---------ZAT14        <------ZmHOX2a(1) ---------->DOF2           --------->CCA1(2)   gatgagaaacagagcagaggggtaagggaaacagaggagctgaggagcaaagacaaagcaacttgagataagagagaagataagaagatagataagctta  3197000                                          --------->SPL7                                        --------->LBD16                      --------->ANAC46 --------->ANAC58                 <---------GLK1(1)     --------->ANAC46                 --------->GLK1(1)     --------->ANAC58                      <----------DOF2<--------              <---------ZAT18         <---------LBD16              <---------GLK1(2)        <--------      ------>ZmHOX2a(2)            <-----------GT1  <------ZmHOX2a(1)<-------TEIL  ------>ZmHOX2a(2)   ggcttcgatctcttagcgcaattcccacaagaagttttaacccggaagacataaggaaatagcttcttagattcgtctactttgatctgtgctacttttt  3197100                <---------MYB52(1)               ------>ZmHOX2a(1)                                             <----------DOF2  --------->ARR14(2)                                                         <---------DAG2  --------->GLK1(2)           --------->ANAC58                            <---------ARR14(2) <---------ARR14(2)           --------->ANAC46                           <------ZmHOX2a(1) <---------GLK1(2) <---------ANAC58                           --------->ANAC55(2) --------->ARR14(2)<---------ANAC58  <---------AHL20(2)       <---------ANAC55(2)    <----------DOF2 -DAG2         <----------DOF2--------->ANAC58                <---------ANAC46   <-----------GT1 ---- --DOF2       --------->TOE2(3)      --------->AHL20(2)      <-----------------------TaNAC69(2) <----   tcagattctgcctcatcctttacttgttattcaagtcatataaatgaagaacatagagagagagacgtatgcagaggaacttttttcctttgtgaacaga  3197200                                   <---------REM1(1)                         --------->MYB52(1)                      <---------ANAC55(2)        ---------->DOF2                                   <-                      --------->ANAC58 <---------STY1(2)                                           <-                      --------->ANAC58 --------->STY1(2)        --------->ARR11(3)                <--    --------->WOX13(1)--------->ANAC55(1)       ========================HOX2a_HOX2a            <----- ----->GLK1(2)        --------->ANAC55(2)       <------ZmHOX2a(1)<------ZmHOX2a(2)             <----- -----GLK1(2)        <-----------------------TaNAC69(2) <---------ZAT14        --------->CCA1(2) <---   atttgtcaatctatctccttggagacgtaagggagagaagtagctagagaggaaagagagtagagagatcaagtagacgagataagagagagaagttttg  3197300                                                                                                    <                                                                                               <-----                                                                                             <-------    <---------MYB46(3)                                                                    <------MYB83  <-------GAMYB                                                                           <------MYB46(1) --------->ALFIN1                                                                        --------->MYB59 --------ANAC58                                                                   --------->ANAC58 <- --------ANAC58                                       <-------TEIL                ----------->GT1  <- -------MYB46(3)                     --------->AHL20(2)                           --------->ANAC55(2) ------RAV1(1)              --------->YAB1          <---------SPL7                --------->ANAC55(1) ----ANAC46              <---------GLK1(1)         *TSS                           <---------ANAC55(2) ------ANAC46       <----------DOF2  <---------AHL20(2)                           --------->ANAC58 <-   tgggtgttgttgtaagttttagctttgaaatcagagtatttatttagagagagacgttcgcatactattctttggaagagagagacgtaatttggtattg  3197400                                                                       --------->ALFIN1                                                                     --------->ALFIN1                                                                   <---------ANAC55(2)                                                                   <---------ANAC55(1)                                                                   <---------ANAC58                                                                   <---------TGA1a                                                                   --------->TGA1a                                                                   ===========================bZIP_DOF                                                                   <---------ANAC58                                                                   <---------ANAC46 -------GAMYB                                     ===========================bZIP_DOF ------RAV1(1)                                    ---------->DOF2  <---------O2 -----CBF                                 ============================HOX2a_HOX2a -----MYB83 ---------->DOF2               ------>ZmHOX2a(2)        --------->O2 -----MYB46(1)----------->GT1           --------->ARR11(3)     <------ZmHOX2a(1) --------MYB46(3)                       <---------ARR11(3) --------->ICU4          ---------->DOF2   ttggttaagagagagaaagttactaagtcttgggatgtattcgatcttcttagaaaggggaatgaggagacgtgtgggagaacgagaaagggacttaggc  3197500                                                                        <------MYB83                                                                        <------MYB46(1)                                                                        ----------->GT1                                                           ------>ZmHOX2a(1)           <---------ICU4                                                          --------->TOE1(3)            -------->HAHB4                                                          --------->TOE2(3)            <---------AHL20(2)                                                        <---------YAB1 --------->MYB59<---------ATHB51                                                --------->GLK1(2)--------->YAB1       --------->ICU4                                               <---------GLK1(2)<---------ATHB12<-----------GT1    <-              <----------DOF2     <---------ANAC46  <---------DAG2     --------->MYB46(2)          <-          --------->YAB1          <---------ANAC58  <----------DOF2<---------YAB1     <---------ATHB12     <---------ATHB12             <---------ANAC58 --------->TOE2(3)--------->ATHB12  <---------YAB1   caaacccatcattcatcttttaggcttatatatgtttcttgcatcacaagattcctttatccttaaatcatgtttggtaaaataactaattattcgtctt  3197600                                                      <---------ANAC46                                                  <---------------AGL15                                                  --------->TOE1(3)                                                  --------------->AGL15                                                  --------->TOE2(3)                                                 <-----------------AGL1                                                 <-----------------AGL3                                  ----------->HVH21------>ZmHOX2a(1)                           <-----          --------->ATHB12    <---------ATHB12   ----------------->AG                    <---------ARR14(2)         <---------YAB1     ------>ZmHOX2a(1)    ----------------->AGL2                  --------->ARR14(2) --------DAG2          --------->YAB1<---------bZIP60(2)                          ---------->DOF2  <- ---------DOF2        <---------ATHB12           ----------------->AGL1   --------->YAB1 --------->GLK1(2)   actttatactcgtgattagttgaaatcatcctatcagtgacatgttcaacttccttaagtggaatttatgtcttaatcagcatgaaaagagaaactgctt  3197700                                                                                                 <---                           --------->AHL20(1)                                        <---------DEAR3(1)                           <---------ARR11(3)                                        <------NtERF2                           <---------AHL20(1)                                       --------->ZAT18                           --------->ARR11(3)                                       ------>NtERF2<---                        ------>MYB46(1)                                             <---------ZAT18                        ------>MYB83                       --------->YAB1          <---------ANAC58                     --------->ANAC58             <---------YAB1                   <---------ANAC46 -----DOF2  --------->ATHB12  <-----------GT1   --------->YAB1                     <---------ANAC58 --------TOE2(3)     --------->ANAC58       <---------ARR14(2)                  <-----------RAV1(1)   taagttaaatcaagttattggacaccaaatattttctatgttagtgtatatgatgactcaaacaaaattcaatgtattatttctggcgcgctggagtctt  3197800                           <----------DOF2              --------->ZAT2              --------->At4g35610                             --------->LBD16           <-------TEIL   ------>ZmHOX2a(2)                   ----------->GT1   --------->At4g35610  --------->ARR11(3)                   ----------->GT1   <---------At4g35610  <---------ARR11(3)                  <---------LBD16 ------TOE2(2)<---------ZAT2   <---------YAB1   <---------AHL20(2)          --------->YAB1         <- ------TOE1(2)<---------At4g35610              --------->AHL20(2)   --------->AHL20(2)     ----------   atgttatctgaggtccagctcattgtgatctttattttagacttaacaattttataggttgaaccggaaataaaacaattttaaaaaatcagtgaaagac  3197900  Previous    Next  AGI:  At3g10320.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G41640.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23616.1); contains InterPro domain Protein of unknown function DUF563 (InterPro:IPR007657) Range:  from: 3195319    to: 3197351    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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