Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     <-------TEIL                                 <-------PIF5                                --------->O2                                --------->ANAC58                                --------->TGA1a                                --------->ANAC46                                --------->ANAC58                                <---------TGA1a                              <---------ALFIN1                                        <----------DOF2 --->ANAC46                --------->ANAC58                         ----------->GT1  ------>ZmHOX2a(2) ->CCA1(2)                 --------->ANAC58                   --------->At4g35610  --------->ARR11(3) -ARR14(2)                 --------->ANAC46                   <---------At4g35610  <---------ARR11(3) >ARR14(2) <---------------AtSPL8------->PIF5               --------->YAB1  --------->MYB52(1)   cgaagatgagtaagtggaacaaatcacataccccacgtccattgtctgaaatgctgactgaatcatctgaatgtaaaacaacgtcgatctttgaagcaaa  3178700                                 ------>ZmHOX2a(2)                                <------ZmHOX2a(2)                                <---------GLK1(1)                                --------->GLK1(1)                               --------->ARR11(3)                               <---------ARR11(3)                     <-------GAMYB                    <---------ANAC58            <-----------HVH21  <---------AGP1           --------->bZIP60(2) <---------ARR14(2)           --------->O2        --------->ARR14(2)                       <-----------GT1        ------          <------NtERF2 <-----------HVH21 --------->TOE2(3)          --------->CCA1(2)         ------ <---------ZAT2     <---------ANAC46      --------->TOE2(2)        <------ZmHOX2a(1)       <--------- --------->ZAT2     <---------ANAC58      --------->TOE1(2)       ----------->GT1    <------ZmHOX2a(1)   accagcttgggcctcgtcaattgcgttgtcaaggatctcataaacctaagaaacaacatgtattgggaaggatataaccagttgataggagccagtcacg  3178800                                                --------->AGP1                                                <---------ARR11(3)                                                <---------ARR14(2)                                               --------->GLK1(1)                                       --------->ANAC58                               <<<<<<<GRF7      --------->TOE2(3)                --------->ANAC58                             ------>ZmHOX2a(1)     ----------->GT1                   --------->ANAC46                             ----------->HVH21     --------->ANAC58            ----------->GT1--------->ARR14(2)         <---------ARR11(3)     --------->ANAC58       --------------->AGL15<------ZmHOX2a(2)       <---------TOE1(2) --->ANAC58                ----------------->AGL1--------->CCA1(2)       --------->LBD16   <--------- --->ANAC58     ---------->DOF2 --------->ALFIN1--------->ARR11(3)<-------TEIL<----------DOF2 --HVH21  ---------->DOF2<-----------GT1    --------->ANAC46     <-----------GT1  ----------------->AGL1   accaagaacgtcaaaagaaaaaggcatttaccagatggtgcaaaccacgagatccagtgctaccaatatacatcccaggtcttttcctgacagggtctaa  3178900               --------->ANAC46           ------>MYB46(1)           ------>MYB83                           ----------->GT1         <---------MYB111(1)               --------------->AGL15        --------->ANAC55(2)              ------------------------>ANAC81        --------->ANAC46           <-------TEIL  --------->DAG2            <------ZmHOX2a(1)        --------->ANAC55(1)       --------->CCA1(2)        --------->MYB52(1)<---------KAN4(2)      <---------ALFIN1    --------->GLK1(2)<---------------AGL15   --------->YAB1     --------->YAB1 --ARR10<---------ANAC55(2)    <---------TOE2(3)---------->DOF2   <-------TEIL       <---------ATHB12   gccttccaacacctaatacaccatagagaatttaagatacaataacccaaaaaagtgaaactaagagattcatagtaggaattttcaataactatagaag  3179000                                                                                        <---------ANAC58                                                                           <----------DOF2                                                                         ================HOX2a_HOX2a                                                                         <---------RVE1(1)                                                                         <------ZmHOX2a(2)                                                                        --------->ARR14(3)                                                                        <---------ARR14(3)                     --------->ZAT18                                    --------->ARR11(3)                     --------->ZAT14                      --------->ANAC58===============HOX2a_HOX2a                     <---------ZAT18                      --------->ANAC58------>ZmHOX2a(2)                     <---------ZAT14                  --------->ANAC58  <---------ARR14(2)          -                 <---------------AtSPL8               --------->ANAC58  --------->ARR14(2)          -                ------>ZmHOX2a(2)                    --------->DAG2     <---------ARR11(3)          -             --------->YAB1                         ---------->DOF2    --------->RVE1(1)<---------ANAC58             --------->ATHB12                 --------->At4g35610   ---------->DOF2     <---------ANAC46            <---------ATHB12--------->YAB1 <---------ATHB12     <----------ID1    <------ZmHOX2a(1)<-   aaaacatcgttccaatgatcgagtacacaaacataaaaacagcaaatcatctaaaaaagcaagaaaacgaaaaagatctttagaggaattacttggatgt  3179100             --------->TOE2(3)             --------->TOE1(3)            <---------ICU4         --------->YAB1      --------->YAB1     <---------ZAT18 -------->ANAC58         <---------At4g35610                                    --------->GLK1(1) -------->ANAC46     --------->ALFIN1                                           <---------CCA1(2) --- -------->ANAC58  <---------ZAT6                                   <---------TOE2(3) --------------->AtSPL8 --------LBD16------>ZmHOX2a(1)                                <----------DOF2 <----------DOF2  <----   gctcggaactataatccttagaggtagagctctcttggagagactccatggtcgatgacataaaacttttaggtgagaccgcatttctttgtacaagtct  3179200                                                                        <---------ANAC58                                                                        <---------ANAC58                                ------>ZmHOX2a(1)  --------->ICU4  <---------DAG2                                --------->LBD16  --------->YAB1  ------>MYB83         <------------CBF     ----------->RAV1(2)<---------ICU4  ------>MYB46(1)        --------->ATHB12 <----------DOF2  ----------->GT1      <---------MYB111(2) ------>WRKY45           <---------DAG2 ------>MYB83----------->GT1<----------DOF2 ------DOF2     --------->MYB52(1)      ------>MYB46(1)        <---------MYB111(1)   ttgactaaaaacattggctaactgaaactttatcctgaaaccaaatgtgaataatggttatactaccaacttttgcttcagactatggaagcgaatcaca  3179300                                           --------->ANAC58                                           --------->ANAC46                                           --------->ANAC58                                           <----------ID1                   <------------CBF                                        <---------ARR14(2)               ------------>CBF                                        --------->ARR14(2)              --------->ANAC58                                       ------>MYB46(1)                  --------->ANAC58               --------->ZAT14         ------>MYB83                   ---------->DOF2               <---------ZAT14       <---------MYB59           <---------At4g35610            --------->YAB1   ---------->DOF2                   --------->ZAT2                --------      --------->TOE2(3)    ----------->HVH21                   --------->At4g35610          ---------     ----------->GT1---------->DOF2 ----------------->AGL1   <------ZmHOX2a(1)    <----------DOF2----   tagctaaatgttaatagtaaactaaagccctgaaagtgaccaaatacgaaaaacatttttgaaggagctgaagaaagcaattgactttcacttgaaaagt  3179400                                                      --------->DAG2                                                     ---------->DOF2                      <---------HSFB2a(2)         <---------ANAC46                      --------->LBD16             --------->ANAC55(2)         <------NtERF2              ----------------->AGL1              <---------ANAC55(2)   --------->At4g35610     --------->TOE2(3)--------->HSFB2a(2)  --------->At4g35610        --------->YAB1        <-------- ->DAG2 <---------AHL20(2)                 ------------>CBF          <---------YAB1         <-------- ->DOF2--------->AHL20(2)                 --------->ANAC46   --------->ATHB12--------->ANAC58 ------->GT1  ------------>CBF           --------->YAB1     --------->ICU4   --------->ANAC58   agtataacataaaattcccaattccgagaaaacttggaaactatcagcaatcgcgtaaaggaatgatttttatcatcggaggcaaattggtattgcttct  3179500                                           <---------LBD16                                      --------->AtMYB61                                     ----------------->AGL1                          --------->TOE1(2)                                --------->LBD16                                      <---------LBD16                               --------->LBD16         ---------->DOF2               --------->TOE2(2)                    <---------ANAC55(2)  <---------ARR14(2)                  <-----------GT1                    <---------ANAC46 ----------------->AGL2               <---------ICU4                    --------->ANAC55(2)  --------->ARR14(2)               --------->AHL20(2)       --                <---------At5g28300  ----------------->AG                 <---------AHL20(2)       <-               <-----------GT1 --------->ANAC46   ----------->GT1        --------->AHL20(2)        --       --------->YAB1         --------->LBD16    --------->DAG2     --------->At4g35610    <-------GAMYB -ANAC58      --------->ZAT14 <---------LBD16   ---------->DOF2     <---------At4g35610   --------->ALFIN1 -ANAC58      <---------ZAT14<---------LBD16 --------->LBD16   --------->CCA1(2)    ----------->RAV1(2)   tctattcaatcttcatttcactgcgtaatttccccggaaaccaaaaccggaaaagtgaaaagaagaaatgagctaattaatacaatacctgggtgttgaa  3179600  Previous    Next  AGI:  At3g10270.1    Description:  DNA topoisomerase, ATP-hydrolyzing, putative / DNA topoisomerase II, putative / DNA gyrase, putative. Identical to Probable DNA gyrase subunit B, chloroplast precursor (GYRBC) [Arabidopsis Thaliana] (GB:Q9SS38); similar to DNA topoisomerase, ATP-hydrolyzing, putative / DNA topoisomerase II, putative / DNA gyrase, putative [Arabidopsis thaliana] (TAIR:AT5G04130.2); similar to DNA topoisomerase, ATP-hydrolyzing, putative / DNA topoisomerase II, putative / DNA gyrase, putative [Arabidopsis thaliana] (TAIR:AT5G04130.1); similar to hypothetical protein OsJ_001189 [Oryza sativa (japonica cultivar-group)] (GB:EAZ11364.1); similar to DNA gyrase subu Range:  from: 3173585    to: 3179149    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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