Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   <----------DOF2                                                         ----------->GT1          <-------GAMYB                                --------->ICU4        <--------P       --------->YAB1     <---------ATHB12     <---------DAG2        -------------- --ANAC55(2)        <---------YAB1 <---------GLK1(2)<------ZmHOX2a(2)                  <------------- ->ANAC58<---------MYB46(3)        --------->ARR14(2)  <---------YAB1            <-----------GT1 ->ANAC58----------->GT1<-------TEIL--------->GLK1(1)--------->ATHB12         <-----------GT1 ------- ->ANAC55(2) <---------AHL20(2)    <---------ARR14(2)<--------HAHB4 <------------------------ANAC81   ttaatacatggttgttaaatttctgattcattatccagatttcgaaatcaatggatcattagtaaaactttttttttttttttctacttctcaaatttgt  3166300                                                                  <---------WOX13(1)                                                                <---------ICU4                                                                -------->HAHB4                                                     --------->AHL20(1)                                                     <---------AHL20(1)                                                     --------->AHL20(2)                                                     <---------AHL20(2)                                                    --------->YAB1<---------YAB1                                             <------MYB83       --------->ATHB12                                        --------->ATHB12        --------->YAB1                                        --------->AHL20(2)     --------->ICU4                                        <---------AHL20(2)     <---------YAB1                                       <---------AHL20(2)      <---------ATHB12                              ----------->GT1----------->GT1  <---------TOE2(3)                     -       <---------YAB1        --------->DAG2  <------MYB46(1) --------->YAB1                        <- --------->AHL20(2)         ---------->DOF2 --------->MYB59<---------AHL20(2)                  <----- ->AGL15                 ----------->GT1--------->ATHB51   --------->AHL20(2)                  <----- --AGL15            <---------YAB1  <---------AHL20(2)    --------->YAB1     <---------YAB1    ------ ---->GT1         --------->CCA1(2) --------->AHL20(2)<---------YAB1--------->YAB1<---------AHL20(2)<   aaaaaaaatatgcttataagttatgagaagtaaagtaaaaaattatttggtaaattataattttaatgattaataagttatgttttaaatgttatatttt  3166400          --------->ANAC58          --------->ANAC58    <---------YAB1        ---------->DOF2  --------->ARR11(3)     <-----------GT1     --------->GLK1(2) -------->AHL20(2)       <---------ARR11(3)                               ----------->GT1 --------AHL20(2)    --------->YAB1                                --------->AHL20(2)   --------->HSFC1(2) ----AHL20(1)    --------->AHL20(2)          <-----------GT1  ------------>CBF          --------->HSFB2a(1) ----AHL20(2)   --------->AHL20(2)      <------MYB83        <---------ARR14(2)  <------------CBF----- --->AHL20(2)   <---------AHL20(2) --------->ATHB12  <------------CBF--------->AHL20(2) <---------HSFB2a(1) ---------AHL20(2)  --------->AHL20(2)  <------MYB46(1)----------->GT1<---------AHL20(2)<---------HSFC1(2)   atttatttaacaaagcaaataaataaaaatctatgaatgatttggtttatcgctacattgtgaatccaatataaaatcgttatattgcgaagtttctata  3166500                                                                   ----------->GT1       <---------ARR11(3)                                  <---------HSFB2a(2)       --------->ARR11(3)                                  --------->HSFB2a(2)      <---------GLK1(1)       <---------AHL20(2)           --------->HSFC1(1)      --------->GLK1(1)   <---------MYB52(1)               <---------HSFC1(1)   --------->ANAC46     <---------ANAC58                  <---------LBD16                         ---   --------->ANAC58     <---------ANAC58             --------->ARR11(3)                           <--   --------->ANAC58 <----------DOF2                  <---------ARR11(3)   --------->ZAT14      ------ ---->YAB1       <-----------GT1              ----------->GT1 ---------->DOF2               <--------   atcccaagaaatcttctatatactttccgtttttattttgaaacaaaatggaaactatcttctggaaagtggaaactatagtctatagataatcacataa  3166600       ------->MYC3       <-------MYC3      <---------TGA1a         <---------ARR11(3)      --------->O2            --------->ARR11(3)      <---------O2           <---------CCA1(2)      --------->TGA1a      --------->ANAC55(2) ------>ARR11(3)         <-----------GT1 -------ARR11(3)         <---------AHL20(2)        --------->YAB1 --->AHL20(2)<---------ARR14(2)                 --------->YAB1     ---------->DOF2  <---------TOE2(3) -ANAC55(2)  --------->ARR14(2) --------->TOE2(3)  --------->AHL20(2)    ----------->GT1   aatctccaacgtgtgtattcgtattatttacatatcttaaaaatgagttagaataatatgaagaggtcgaaaagcctgaaaaaactagggttttggccaa  3166700                                                                                         ============                                                                                         ------>ZmHOX2a(2)                                                                                        =============                                                                                        <------ZmHOX2a(2)                                                                                       <---------ARR14(2)                                                                                       --------->ARR14(2)                                                                                       --------->ARR11(3)                                                         ----------------->AGL3        <---------ARR11(3)                                                         <-----------------AGL3        --------->AGP1                                    ------>MYB46(1)      <-----------------AGL2     --------->HSFB2a(2)                                    -------->P           ----------------->AG       <---------HSFB2a(2)                                    ------>MYB83        =================================HOX2a_HOX2a                             ---------->DOF2       <---------DOF5.7(2)            ------>ZmHOX2a(1)                        ----------->GT1       --------->DAG2         --------->MYB52(2)<---------AGP1                      <------ZmHOX2a(1)---------->DOF2  <------ZmHOX2a(2)         ==============HOX2a_HOX2a      ----------->RAV1(1)  --------->CCA1(2) ---------->DOF2        <-------TEIL  =============HOX2a_HOX2a   agatggagcaacaagaagagaagaggaagataaaagcctaccaaagaaaaagtaaacgatccaaatcaggttcgtcgtccattcctctagatctagtctc  3166800                                             <---------ANAC58                                             <---------ANAC46                                             <---------ANAC55(2)                                             --------->ANAC55(2)                                             <---------ANAC55(1)                                             <---------ANAC58                ----------->RAV1(2)      <-------GAMYB                =======================RAV<---------MYB52(1)           --------->ZAT6               --------->MYB52(2)                 --------->DEAR3(1)        ------>ZmHOX2a(1)            <---------ARR14(2)                 --------->DEAR3(1) --------->ARR11(3)             <---------ANAC46                        <---------ALFIN1 <---------ARR11(3)             <---------ANAC58     --------->ANAC46   --------->AtMYB61 --------->ARR14(2)     --------->GLK1(2)XXXXXXXXXXXXXXXXXXXX>MIR858<---------ATHB12 <---------GLK1(2)     <---------GLK1(1)<---------ANAC58            --------->MYB46(3) <---------ARR14(2)    --------->GLK1(1)<---------ANAC58          --------->WOX13(1) ==============HOX2a_HOX2a      <---------ANAC58     --------->ANAC58  --------->MYB46(3) ==============HOX2a_HOX2a <-----------RAV1(1)       --------->ANAC58--------->YAB1   agagatactcctaagactgcctgagaaatctgttgcgaggtttcgttgcgtgtccaagccttggtcatcaatcaccaccgagccatatttcatcaacttg  3166900                                                                            <-----------TGA1                                                                            <-----------HVH21                                                                      ----------->RAV1(1)                                                                    --------->LBD16                                                                   --------->ANAC58                            --------->At4g35610                    --------->ANAC46               --------->ANAC58                                    --------->ANAC58               --------->ANAC46                                    --------->ANAC55(2)               --------->ANAC58             ---------->DOF2        <---------ANAC55(2)              <---------LBD16      --------->ANAC58               <---------LBD16             <---------ALFIN1    ---------->DOF2                <---------ARR14(2)            <---------REM1(2) <----------DOF2                   --------->ARR14(2) --------->MYB46(3)<----------DOF2 --------->ANAC58         ------>ZmHOX2a(1)   ttaacaactaggtctccacggcttttactctgcttcaaagcaaatgaaaagttttttgtttcctcgattccgcaacatcgtcagacgtttgagacttgga  3167000                                                                               --------->GLK1(2)                                                                               <---------ARR14(2)                                                                           --------->ANAC55(2)                                                                           --------->ANAC58                                                                           --------->ANAC58                                                                           --------->ANAC46                                                                          <---------LBD16                                                                          --------->SPL7                                                                         --------->MYB52(1)                                                                         --------->STY1(1)      <----                                                                         <---------STY1(1)   --------                                   --------->YAB1                   <-----------------AGL1 <---------ANAC58                              <-------GAMYB                     <---------ANAC58           <---------ANAC46                             ------>ZmHOX2a(2)            --------->AHL20(2)   --------->ARR14(2)----                   <---------At4g35610     <---------GLK1(1)    <---------ANAC58   <-----------HVH21                   --------->At4g35610     --------->GLK1(1)  <-----------GT1 <---------GLK1(2)<-----                   <---------ZAT2 <---------YAB1  --------->At4g35610 --------->ANAC46     <---------ANAC58   acaagtctcactcttattctcagcttattgatcgttatcatatggaattctcagaagaaatgaattacttcccccctacggaatctgtcaatggcttgat  3167100                                                  ----------->GT1                                                  <---------MYB46(3)                                                <-------GAMYB                                            ----------->RAV1(1)                                            ------------>AtMYB77             --------->ZAT2                ----------->HVH21             --------->At4g35610         --------->ANAC46         --------->GLK1(2)               --------->ANAC58                                        <---        --------->YAB1    <---------ANAC46 --------->ANAC46                           <---------ARR11(3) <----------DOF2         --------->ATHB12<---------ANAC55(2)                          --------->ARR11(3) -----At4g35610        <---------WOX13(1)--------->ANAC55(2)                       <---------KAN4(2) --->ARR10   <---------At4g35610         --------->ANAC58          >>>>>>>>>>>>>>>>>LFY ------>ZmHOX2a(2) -->ZmHOX2a(2)      <---------YAB1      <---------ZAT18            <<<<<<<<<<<<<<<<<LFY ============= ----ARR11(3)<---------ZAT2             --------->ZAT18    <-----------GT1   --------->GLK1(1)-------   ctgctttcaagaatcagctaggctgattgtttggaaccctagtacgcgacagttgttaattttaccaaaacccaatgggaactcgaatgatctaacaatc  3167200  Previous    Next  AGI:  At3g10240.1    Description:  F-box protein-related. Identical to Putative F-box protein At3g10240 [Arabidopsis Thaliana] (GB:Q9SS35); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G47790.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60954.1); contains InterPro domain F-box associated type 3 (InterPro:IPR013187); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 3166703    to: 3167872    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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