Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   --------->TOE2(3)      <---------At4g35610                    --------->AtLEC2    --------->DAG2  --------->At4g35610                 <---------ATHB12--------->TOE1(3) <---------DAG2  --------->ZAT14                ---          <----------DOF2  <-----------GT1         <----------DOF2 <---------ZAT18               <---   <---------MYB52(1)  ------->TEIL    ---------->DOF2 <---------TOE1(3) ---------->DOF2         <---   agtccgttctctctttccattcatgcatttttcaacctcaataaagttgtctactttaagcttccatagtactctcaaagtgacaacaatgtggatgcta  3144100                                                                               --------->ANAC58                                                                               --------->ANAC58                                                                    --------->MYB46(3)       --------                                    ---------->DOF2                --------->ANAC58      --------->YAB1 ------>ATHB12                ---------->DOF2                      --------->ANAC58    --------->MYB52(1) ------TOE2(3)               --------->AHL20(2)                  --------->MYB46(3)--------->ANAC58 ------YAB1              --------->AHL20(2)                    --------->RAP2.6(2) --------->ANAC58   agattggagaaactatatagatagaaatcaaataaagagaaaggaacactgatatatatgttcagccacaaccaattttcgaagcaagcaaacagaatca  3144200                                                                                       <---------ATHB12                                                           ----------->GT1             --------->MYB46(3)                                                   ------->TEIL                       ------>MYB46(1)                                          --------->MYB52(1)                          -------->P   --                                          --------->YAB1  --------->DAG2              ------>MYB83 <-                            <---------ARR11(3)<---------At4g35610                   --------->AtMYB61                            --------->ARR11(3)--------->At4g35610                   --------->MYB46(3)                           <---------CCA1(2)  --------->ZAT2                <---------ARR14(2)     --                         --------->AHL20(2)   ----------->RAV1(2)        <---------ANAC46          <-                     ----------->GT1 <---------ATHB12    ---------->DOF2<-----------------------TaNAC69(2) ->GLK1(2)         ---------->DOF2 --------->WOX13(1) --------->ANAC46 --------->CCA1(2)     <-------   attgatgaacacaaatacctataaagtttaaatctttcaatcaataacagctgaacccgaaaagtagaataagagacggatagagaccaaccatgggggg  3144300                                                                                                 <---                                                                                                <----                                                                                                -----                                                                                  --------->HSFB2a(2)                            --------->At4g35610                     <---------ARR11(1)          <----        ----------->GT1     <---------At4g35610          <-----------RAV1(1)      <---------------AGL15 --------------->AGL15    <---------DEAR3(1)        ----------------------->TaNAC69(2)          ----- <---------------AGL15   <---------At4g35610   <---------AtMYB61    --------->ARR14(2)         <----- =================================================================================================MADS_MADS ------->HSFC1(2)      --------->ANAC46      <-----------RAV1(1)    <---------ARR14(2)         ------ --------HSFB2a(1)    <---------LBD16        <---------ANAC46       ------->TEIL  --------------->AGL15 ------->At4g35610    <---------At5g28300    <---------ANAC58      <---------ARR14(1)      <---------ZAT6 --------HSFC1(2)    <-----------GT1         <---------ANAC58      <---------CCA1(2)  --------->YAB1< --ANAC46          <-----------HVH21<---------TOE2(3)  <----------DOF2            <---------HSFB2a(2)   aagcttcaattggtaaatcgatttcacggctgctcaataacgtttttgtgtggtcttctttgttgcaacgtatctatatcacttccagtaatagtggaaa  3144400           ------>ZmHOX2a(2)          <------ZmHOX2a(2)         <---------ARR14(3)         <---------ARR11(3)         --------->ARR11(3)         <---------ARR14(2)         --------->ARR14(2)        --------->GLK1(1)        <---------GLK1(1)       ----------->ARR10      <------ZmHOX2a(1)                             --------->RAP2.6(2) ------HSFB2a(1)                                  --------->ZAT2       --------->DEAR3(1) -----ARR11(3)            <---------ANAC58        <---------ZAT2       <---------ALFIN1 ---->ARR11(3)            <---------ANAC58 <---------At4g35610      --------->ANAC46       <---------ICU4 -----ARR14(2)       --------->MYB52(2)    --------->ZAT14         --------->MYB46(3)      --------->YAB1 ---->ARR14(2)       <---------MYB46(3)    --------->At4g35610   --------->ARR14(2)       <---------YAB1 ----GLK1(1) ------>ZmHOX2a(1) <---------HSFB2a(2)<---------At4g35610  --------->AtMYB61--------->YAB1 --->GLK1(1)--------->TOE2(3)  --------->HSFB2a(2)--------->At4g35610 --------->MYB46(3)<---------ICU4 ---------LBD16     <---------AtMYB61<-----------ARR10           <---------ARR14(2)    <---------ATHB12   tcttcggaggagatccttagggtttgtggggttcgagagtgtctcagcactcagcagccatttgcagtatccaccaccttcattttcgaatcatcatcat  3144500                                              <---------AHL20(2)                                              <---------ICU4                                             --------->AHL20(2)                                       <---------AHL20(2)                            *TSS      <---------AHL20(2)                                  ---------->DOF2              ------>ZmHOX2a(1)       --------->AHL20(2)         <---------ANAC58       <---------YAB1             --------->TOE1(3)     --------->WOX13(1)  ---------->ID1---------->ARF1<---------ICU4             --------->TOE2(3)   ------------>CBF<---------AHL20(2)  ---------->ID1 --------->YAB1        ------>ZmHOX2a(1)---------->DOF2   --------->YAB1        <---------ANAC58   --------->AHL20(2)  <---------At4g35610   --------->AHL20(2)<---------AHL20(2)  <-----------GT1----------->GT1   ------   cttcatcttcctcatccttaactaaattaaagcctttcaattaaataataaatatttgtttttttttccttgtctcaaacagttaataatatcaaagtag  3144600                           <---------GLK1(1)                         <---------AtLEC2                    <---------ICU4              --------->YAB1              --------->TOE2(3)            <-----------ARR10            <---------ARR11(1)                                                          <---------YAB1            <---------ARR11(3)              ------->TEIL                              --------->YAB1            --------->ARR14(2)    ----------->GT1      --------->DAG2                <---------YAB1 ----->GT1 <---------CCA1(2)    --------->At4g35610   ---------->DOF2     <----------DOF2      ------   ttaacaaaaatccaaatcttaatttttgcatatcagatgtaaaatgtattttgtcaaaaagttttcatgttaatgacttttggttttatgatgatacaaa  3144700                                                                          --------->DAG2                                 ----------->GT1                         --------->DAG2                               <-------TEIL       ----------->GT1  ---------->DOF2                              --------->CCA1(2)  --------->DAG2--------->ANAC58                             <---------ARR14(2) ---------->DOF2--------->ANAC58        --------->ANAC58 --->ANAC46    ----------->RAV1(1)     ---------->DOF2---------->DOF2   ---------->DOF2--------->ANAC58   caacttgggcctaagcccaacacaaaatatggatacagaaataaagaagaaaaagttaaaggcccaagacaaagaaaagggaagaggcccagcaatgtga  3144800                                                                                    --------->LBD16                                                                                   --------->O2                                                                        <---------YAB1        <----------DOF2                                               --------->YAB1<---------LBD16       <---------HSFC1(2)                                       --------->ANAC58   <---------O2       --------->HSFC1(2)                                     <-----------RAV1(2)  <---------ANAC46       --------->HSFB2a(1)                               <---------ANAC58         <---------LBD16       <---------HSFB2a(1)                               <---------ANAC46     <------MYB83     --------->ARR11(3)                                  <---------ANAC58     <------MYB46(1)     <---------ARR11(3)     ------>MYB46(1)    --------->AtLEC2 --------->ANAC58----------->HVH21   --------->ANAC58         ------>MYB83       --------->ANAC58 <------MYB46(1)<-----------HVH21   --------->ANAC58    <-----------GT1         --------->ANAC58 <------MYB83 --------->MYB59  <------   gacacaagaactttctgaacattttaaaccaaacaaaacaattctgaacatgcaaaatggcttggcaggtaatcacaattaggtcacggggaagcctaca  3144900                                      <----------DOF2                                 <-------MYC2                                 ------->MYC3                                 <-------PIF5                                 ------->MYC2                                 ------->MYC4                                 <-------MYC4                                 <-------MYC3                                 ------->PIF5                                <---------O2                                --------->TGA1a                                =================bZIP_DOF                                <---------TGA1a                                --------->O2                              <------------OsbHLH66             --------->ARR14(2) <---------ANAC55(2)                                     --------->CCA1(2) --------->GLK1(1)            <---------ALFIN1                                         <---------ARR11(3) ---ZAT14    <---------ARR14(2) --------->ANAC55(2)  <-------TEIL                --------->YAB1   gagaaatctacttcgaatcccaaaatttctcaccacgtgtctttttcttacaaaattcgtctccaagaacgtttagaaacaaatcacaagatttaaaaca  3145000  Previous    Next  AGI:  At3g10160.1    Description:  ATDFC (A. THALIANA DHFS-FPGS HOMOLOG C); dihydrofolate synthase. similar to ATDFB (A. THALIANA DHFS-FPGS HOMOLOG B), tetrahydrofolylpolyglutamate synthase [Arabidopsis thaliana] (TAIR:AT5G05980.1); similar to ATDFB (A. THALIANA DHFS-FPGS HOMOLOG B), tetrahydrofolylpolyglutamate synthase [Arabidopsis thaliana] (TAIR:AT5G05980.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO23346.1); contains InterPro domain Mur ligase, central; (InterPro:IPR013221); contains InterPro domain Mur ligase, C-terminal; (InterPro:IPR004101); contains InterPro domain Folylpolyglutamate synthetase; (InterPro:IPR001645) Range:  from: 3139388    to: 3144528    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g10180.1    Description:  kinesin motor protein-related. similar to ZCF125, microtubule motor [Arabidopsis thaliana] (TAIR:AT1G59540.1); similar to hypothetical protein OsJ_028249 [Oryza sativa (japonica cultivar-group)] (GB:EAZ44766.1); similar to hypothetical protein OsI_030362 [Oryza sativa (indica cultivar-group)] (GB:EAZ09130.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63057.1); contains InterPro domain Kinesin, motor region; (InterPro:IPR001752); contains InterPro domain Prefoldin (InterPro:IPR009053) Range:  from: 3143479    to: 3154649    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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