Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         <---------ANAC55(2)             --------->KAN4(1)             --------->GLK1(1)             <----------TaMYB80            <---------ARR14(2)            ---------->TaMYB80                                                            -------->P     <----------DOF2   --------->ANAC55(2)                      <---------AHL20(2)        ------>MYB83 ->TEIL     --------->ARR14(2)                                  <---------AHL20(1)        ------>MYB46(1) >AtLEC2    <---------ARR11(3)                                  --------->AHL20(2)       ------>ZmHOX2a(1) >ANAC58    <---------KAN4(2)                                   --------->AHL20(1) <---------DAG2<--- >ANAC58    --------->ARR11(3)                 <-----------GT1 --------->AHL20(2)  <----------DOF2<--   ttccattctttggggatattcagacacataattcagccaaactaaattttaactatttcaaacaattttatttgtaattagataacttttcctaccattt  3129700                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   --                          --------->ARR11(3)                                                       <-                          <---------AHL20(1)              <----------DOF2                          <-           --------->ARR11(3)                         <---------ALFIN1 --------->AtMYB61           <-           <---------ARR11(1)             --------->YAB1 --------->TOE2(3)                        ---          <---------CCA1(2)     <---------YAB1       --------->MYB46(3)--------->ZAT6           ----- --------GT1              <---------ARR11(3) --------->YAB1      --------->ZAT6     --------->ANAC46< ---------GT1     <-----------GT1     --------->ZAT6-------->P<-----------GT1      <---------REM1(2)<   taacttactatcaaatcttttaacttgatatattctgatcacactaatcacatctaccacctttataccactaccactacaagtctacacaactattccg  3129800                                                                         <---------AHL20(2)                                                                         --------->AHL20(2)                                                                        <---------AHL20(2)  <----------DOF2                                                       <---------AHL20(1) ------>ZmHOX2a(2)                                                      --------->AHL20(2) ------->AGP1                                                     <------ZmHOX2a(2) ------->ARR14(3)                                                 --------->CCA1(2)             ----- ------->ARR11(3)                                                 =================================HOX2a_HOX2a ------->ARR14(2)                                                --------->ARR14(2)             <---- --------ARR14(2)                                                --------->AGP1                 <---- --------ARR11(3)                                                --------->ARR11(3)         <------ZmHOX2a(1) --------ARR14(3)                    ----------->GT1             <---------ARR14(2)     --------->ICU4 ------>GLK1(1)                   <---------AHL20(2)             <---------ARR11(3)   <---------ICU4< ---->LBD16   --------->RVE1(1)  <---------AHL20(2)             --------->GLK1(1)    --------->ICU4 - ------ZmHOX2a(2)         <---------MYB52(1)                    <---------GLK1(1)    <---------YAB1 - ---------RVE1(1)      <-------TEIL <---------TOE2(3)         <------ZmHOX2a(1)    --------->YAB1  --   agatctttatgtgaaaatatcgaaattcgtttttttttaatgtgaaaaaatcgaaattagtttaggagatccaatttttttaaaaacataattaggagag  3129900               <---------ALFIN1          --------->ANAC46          <---------ALFIN1        <---------ALFIN1        --------->AtMYB61       --------->MYB46(3)    ----------->HVH21    ------->GAMYB   --------->bZIP60(2)   --------->DEAR3(2)   <---------MYB55(2)   --------->MYB46(3)----------->RAV1(1)  ------>MYB46(1)   --------->ANAC46  ------>MYB83 --------->ANAC46  --------->ANAC46  --------->ANAC58 ---->ZAT18 --------->ANAC46 -----ZAT18 --------->ANAC58 -----ZAT14 --------->ANAC58                                 <------ZmHOX2a(2) ---------ALFIN1------>NtERF2<-----------GT1                --------->ARR11(3) -------->AtMYB61   --------->ANAC58          --------->AHL20(2) -------->DEAR3(1)<---------ALFIN1<----------DOF2           <---------ARR11(3) ------->MYB46(3)--------->MYB46(3)    <---------TOE2(3)---------->DOF2                         -----   caccacccgaccacaccccaccacgacatataaacacttttaatgaaaaaaaatgagataaagatcatttaggggagcatttgatagaatggcatttctc  3130000                 <-------PIF5              <-----------RAV1(2)            --------->ANAC58            --------->ANAC58          ---------->DOF2         --------->ARR14(2)         <---------ARR14(2)       --------->LBD16       --------->ANAC46                                                               <---------ARR11(3)      --------->HSFB2a(2)                                                             --------->ARR11(3)      <---------HSFB2a(2)                  --------->AHL20(2)                         --------->GLK1(2)     <---------LBD16                     <---------HSFB2a(2)                 *TSS    --------->RVE1(1)  --------->KAN4(2)                      --------->HSFB2a(2)<---------ARR14(2)       --------->CCA1(1) <----------TaMYB80             --------->TOE2(3)      ------->GAMYB      --------->ANAC58 --------->KAN4(1)        --------->ANAC55(2)          --------->TOE2(3)  --------->ANAC58 <---------KAN4(1)        --------->ANAC46 ----------->TBP  --------->ARR14(2)     --------->AHL20(2) ---->ANAC55(2)  ------->PIF5   --------->TOE1(3)     --------->MYB46(3)  --------->ANAC46   gtaatattcccgaaacgcaggggcattcacataaccttaagttctataaatatgcaaccacaaatctccaaaactcaagaaacaaaaaaatctctaaaca  3130100                                                                                               <-----                                  ------------------------>ANAC81                              ------                                 <----------ID1               --------->ARR14(2)              -------                      <---------TOE2(3)                       <---------ARR14(2)           ----------                     ---------->DOF2                --------->DAG2                   ----------->GT1         ---------->DOF2   ----------->GT1         ---------->DOF2                 ---------->DOF2  -   catatacagaagaaagcacaaactaaagttagaaaaaaacaaacaaacaaacaaaaagtatggggaactgtttagtaatggagaagaaagtgataaagat  3130200       -------->HAHB4       --------->ATHB12 ----ARR11(3)                                <-------TEIL               ------>ZmHOX2a(1) --->ARR11(3)                            <---------TOE2(3) --------->ANAC58 -->YAB1     ---------->DOF2             <---------TOE1(3) --------->ANAC46          <----------DOF2 >DOF2--------->ICU4               --------->TOE1(2)       --------->ANAC58  <---------ZAT14        - -------->YAB1                  <------ZmHOX2a(1)       ------>ZmHOX2a(1)    --------->ZAT14      ---   aatgagaaatgatgggaaagtagttgaatacagaggacctatgaaggttcatcacatcctcacccaattctctcctcactactctctctttgactctctc  3130300                                    <-----------RAV1(1)                             <---------HSFC1(2)                             --------->HSFC1(2)           --------->At4g35610<---------GLK1(2)                                        ------->MYC3      --------->YAB1        --------->ANAC58                                      --------->ANAC58  --------->MYB46(3)        --------->ANAC58                                    ---------->DOF2 ------>MYB46(1)       --------->ANAC58                                      --------->WOX13(1) ------>MYB83          --------->ANAC58                           <------ZmHOX2a(1)    <-------MYC3 ---------->RAV1(1)    --------->ANAC46    <---------RAP2.6(3)  --------->LBD16<---------ATHB12 ------>MYB46(3)     <---------ALFIN1     --------->RAP2.6(2)  <-----------RAV1(2)--------->ANAC58   accaacaattgtcatcttcatccccaagccaagcttctctgtggccgtctctactatctattgccccaggagactaactcaatcaagcacatgaagaaga  3130400                                   ---------->DOF2                              --------->ALFIN1                           <---------AtMYB61                                --------->bZIP60(1)                         --------->LBD16                                 ----------->HVH21                     --------->ARR14(2)                           <---------GLK1(2)          <-----------RAV1(2) ----------->GT1                --------->MYB52(1)     ---------->DOF2 <---------ARR14(2)                      <-----------GT1<---------bZIP60(1)------   cgatgaagaaagtcaggtttgcaaatccagaggtggaaaaagaagaacaagaagaagatagattaacagattgttgtgacaacaccaaggagaagactaa  3130500                                                            <---------ARR14(2)                                                            --------->ARR14(2)                                                            --------->GLK1(2)                                                          --------->HSFB2a(1)                                                          --------->HSFC1(2)                                                          <---------HSFC1(2)                                                --------->At4g35610                                             --------->At4g35610                             --------->ANAC58--------->HSFC1(2)                                     -                             --------->ANAC58<---------HSFC1(2)                                   ---                       <---------ANAC46      <---------At4g35610                               ------                     <---------MYB46(3)     --------->GLK1(2)                                  ------   <---------ANAC46<-------GAMYB    --------->ZAT2<----------DOF2          ----------->GT1     ------ --->MYB52(1)     <---------MYB46(3)--------->At4g35610   <---------HSFB2a(1)       <------ZmHOX2a(1)   tggtgttgtgagagtgaagatggttgtgagtaagcaagagctggagaagctgcttcaaggaggttctgttcatgaaatggtttataggactcttgctaag  3130600  Previous    Next  AGI:  At3g10120.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G03890.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62766.1) Range:  from: 3130077    to: 3130896    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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