Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         <---------YAB1                  <---------AHL20(2)                 <---------ARR11(3)                 --------->ARR11(3)                      <---------AHL20(2)                 <---------AHL20(2)                --------->ANAC55(2)                 --------->AHL20(2)                <---------ANAC55(2)              --------->AHL20(2)                 <-----------GT1              --------->YAB1                     --------->AHL20(2)           --------->YAB1   --------->ANAC46  <---------ICU4          --------->ZAT6    --------->ANAC58 <---------AHL20(2)           <---------TOE2(3)       ------>ZmHOX2a(1)    --------->ANAC58 --------->AHL20(2)           <---------TOE1(3)     --------->YAB1   --------->AHL20(2)  <---------RVE1(1)              ---------->DOF2   <---------ARR14(2) <---------AHL20(2)  <---------CCA1(1)           --------->TOE2(3)             <   --------->GLK1(2)<---------AHL20(2)   <---------ARR11(3)           <----------DOF2               - ---------TOE2(3)<---------AHL20(1)      <---------ARR14(2)       <---------MYB52(1)           <----- ----->AHL20(2)  --------->AHL20(1)      --------->ARR11(3)  ------------>MYB.PH3(1)     --------->TOE2(3)   ttaagaatcctaacaataatatatttttatacgaaaataagaagatattaattacatattaaaaatcagttactttaaagtttaaacttatccctaatat  3125600                                                                                                 ====                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                               <-----                                                                                             <-------                                                                                         --------->ATHB51                                                                       <---------AHL20(2)<---------ICU4                                                                      <---------AHL20(2) -------->ATHB1                                                                      --------->AHL20(2) --------->ATHB12                          ----------->GT1             --------->ARR14(2)                --------->ICU4                        --------->ALFIN1              <---------ARR14(2)        --------->MYB52(1) --       <---------ATHB12--------->TOE1(2)    --------->DAG2         <---------AHL20(2)   <---------YAB1 ---------At4g35610    --------->TOE2(2)   ---------->DOF2         --------->AHL20(2)  ============== -------->At4g35610    <-------MYC3    <---------TOE2(3)          --------->AHL20(2)   <----------DOF2 ----ICU4              ------->MYC3   --------->MYB52(1)  ------>ZmHOX2a(1)   <---------MYB52(2)>>>>>   ttagctccaatcttttgaaggaaaacgtgggtataaatgctaacgaaaagcgagagcatcctcttctatttatttattaaactaacgagcattattgtca  3125700 --------->ALFIN1                                                                              <----- =====================================MYC_MYB                                                  ------ ------O2                                                                                      ------ ----->At4g35610                                                                    ------>MYB46(1) ------At4g35610                                                                    -------->P------- ------TGA1a                                                                       --------->MYB55(1) ----->O2                                               <---------AtMYB61         <---------MYB59 ----->TGA1a                                            <-----------RAV1(1)       <---------MYB111(1) ------RAV1(2)                ------->GAMYB          <----------DOF2              <---------MYB46(2) ----HVH21                   --------->MYB46(3)   ------>ZmHOX2a(1)               <---------MYB111(2) ------->ALFIN1             <---------At4g35610 ====================RAV <---------MYB46(3)--------->YAB1 ======bZIP_DOF             --------->At4g35610 ----------->RAV1(2)  <------------CBF    <---------YAB1 >>GRF7            <---------ZAT18         <----------DOF2          --------->ATHB12------>MYB83   ggtgtgtcgaactatgtctagtgcatattcaactgccaaactactctttctcctgcttttggtggaggcttcattgggtcgatacctacctattatacct  3125800                                      <---------ANAC55(1)                                      --------->ANAC55(2)                                      <---------ANAC55(2)                                      <---------ANAC46                                      <---------ANAC58                                      <---------ANAC58                                   <---------ARR14(2)                                   --------->ARR14(2)                                  <---------GLK1(1)         ---------->DOF2       ------------>CBF                --------->SPL7                      <-      ----------->GT1     --------->ARR11(3)               --------------->AtSPL3                <---    <------------CBF      <---------ARR11(3)           <---------ZAT2     <---------YAB1         <--- ----LBD16                <---------GLK1(2)       --------->ANAC46      ----------->GT1          ---- --->TOE1(2)            ----------->ARR10         --------->ANAC58      --------->YAB1          ----- --->TOE2(2)          ------>ZmHOX2a(1)--------->LBD16 --------->ZAT2 <------------CBF          ----- ---->RAV1(2)---------->DOF2  <-----------GT1     --------->ANAC58 ------------>CBF       --------->TOE2(3)   gggttagattgtaaagaaagcctcctaagattttgcaattccgtgactatccaagcctgcttcggtactcccaattgtaattctcgattctacctgaata  3125900                                                                                                -----   <---------YAB1                                                                               ----- -----------CBF                      <----------DOF2                                  <------MYB46(1) ------YAB1                       <-----------GT1                                     <------MYB83  - ------AHL20(2)               <---------ARR11(3)             <---------MYB52(1)     <---------WOX13(1) ----->AHL20(1)             --------->ICU4                ---------->ID1           <------------CBF < ---->YAB1  <------------CBF<---------YAB1               <-----------GT1 <---------GLK1(1)  <-------- ---->AHL20(2)      <---------HSFB2a(2)          <---------YAB1          --------->GLK1(1)  ---------   atattgtaatagagaattgattccagtaccatgattttacttttacatgttttgatttttttcgtttttttttggatttctcttagattggtttccagac  3126000                                                       <---------TOE2(3)                                                       <---------TOE1(3)                                                      --------->MYB52(1)                                                      <---------DOF5.7(2)                                                 --------->ANAC58       <---------YAB1                            --------->ANAC46    ----------->HVH21    <---------YAB1          --------->ANAC58    ----------->TGA1   --------->YAB1           <---------LBD16 ---->ANAC58         --------->ARR11(3)    ----------------------->TaNAC69(2) ---->ANAC58   --------->ALFIN1            <-------GAMYB -------->GLK1(1)   --------->GLK1(1)     ----------->GT1                                        <--- ---------GLK1(1)   <---------GLK1(1)     <---------MYB46(3)                          --------->ANAC58 -HSFB2a(2) <---------TOE2(3)            --------->ALFIN1                             --------->ANAC58 >HSFB2a(2) --------->DAG2      ------->TEIL  <---------REM1(2)  --------->YAB1       --------->ANAC46   ggaaatgtgacgataaggtgggatatcatgaatgaaactcgaggtggttacacggctaacgttacaatcttcaactacttgaagtatcacgacattgaag  3126100                                                                                      ----------->RAV1(1)                                                                                     ----------->HVH21                                <---------ARR14(2)                                   --------->ANAC58                                --------->ARR14(2)                                   <---------ETT(2)                  --------->CCA1(2)       <---------ZAT14                            --------->ETT(2)                  <---------GLK1(1)       --------->ZAT18                           --------->SPL7                 <---------ARR14(2)       --------->ZAT14                         --------->LBD16       <-------GAMYB           ------>MYB83                                      --------->ANAC46    <---------ANAC58           ------>MYB46(1)    <------MYB83----------->GT1   <---------LBD16    <---------ANAC58         <---------MYB59      <------MYB46(1)     <-----------GT1--------->ANAC58 ---ZmHOX2a(1)   --------->ARR14(2) ------>ZmHOX2a(1)    ---------->DOF2   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   gaccatgggtgttagattggatatgggaagaccaaatcctattgagcactgtaggtgttcaaagtagtaattttacgatatacccggacgacagaaatag  3126200                                                                                --------->GLK1(1)                                     <---------ICU4                            <---------GLK1(1)                                     -------->HAHB4                        --------->ALFIN1                                     --------->YAB1            <---------HSFB2a(2)               <---------DOF5.7(2)  <---------YAB1             --------->HSFB2a(2)               <---------At5g28300  --------->ICU4        ------>MYB83  <---------DEAR3(1)              <-----------GT1     --------->YAB1          ------>MYB46(1)<---------DEAR3(2)    >>>>>>>>>ARR1                 <---------ICU4   --------->YAB1      <---------ORA47(1)    >>>>>>>>>ARR2             <---------YAB1       <---------ICU4     <------ZmHOX2a(1)   --------->ATHB12 ----------->RAV1(1)      <---------At4g35610    --------->ANAC58 <---------TOE1(2)  --------->ICU4  ------>NtERF2--------->YAB1--------->At4g35610 <---------STY1(2)   <---------TOE2(2)  <---------YAB1 --------->ANAC46--------->ICU4   <---------ATHB12  --------->ANAC58------>ZmHOX2a(1)   ggttatgattgtggagttaccgccacaaactgatgataatgatgaccagctaatcataccaacttctagcaaggacggtgggattcctaggtttagagaa  3126300                                                                           <---------MYB52(1)                                                                          ------>NtERF2                                                                         --------->ATERF1(2)                                                                         <---------HSFB2a(2)                                                                         --------->HSFB2a(2)                            <---------ANAC58                             <---------ATERF1(2)                            <---------ANAC58                             <---------ETT(1)                          <-----------GT1                               <---------LBD16             -                    <---------ARR11(3)                              --------->At4g35610           ---                    --------->ARR11(3)                          --------->ARR11(3)                <--                 --------->DAG2                                 <---------ARR11(3)            -------                ---------->DOF2          <-----------RAV1(1)   --------->CCA1(1)           <---------AGP1           --------->AtLEC2<---------TOE2(3)     <------NtERF2 --------->RVE1(1)      <---------REM1(1)    --------->RAP2.6(3)<----------DOF2  <---------TOE2(3)--------->TOE2(3)--------->LBD16------->TEIL   gaacatgacgaccttgcaaaaagctcttttacgttccaaattgatgttggccgagctaatctaaaatatcatcttccggcaattgatcatgtagctctga  3126400                                                                                         --------->bZIP60(2)                                                                                         --------->REM1(1)                                                                                  <---------ANAC58                                                                               <---------WOX13(1)                                   ---------->DOF2        --------->At4g35610<---------ICU4 -------->ANAC46          <---------AHL20(2)              <---------At4g35610--------->ATHB12 ------>AtMYB61           --------->AHL20(2)        --------->LBD16         <---------YAB1 -------ALFIN1         ----------->GT1             <---------ANAC46         --------->ICU4       <--- ---->HVH21    <-------TEIL      <---------YAB1   <---------LBD16    <-------TEIL <---------ANAC58   ccacaccaagagggacatacatatgtgataaattgatgaaagttactcaaactccgggttatctgagtaagttcatccatgattgcttgccacatcatat  3126500  Previous    Next  AGI:  At3g10116.1    Description:  contains domain PD140986 (PD140986) Range:  from: 3126028    to: 3126624    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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