Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  <----------DOF2                                               <---------ANAC46                                               <---------ANAC58                                               <---------ANAC58                                              <------NtERF2                                            <---------RAP2.6(2)       <----------DOF2       ------>ZmHOX2a(2)              ------>ZmHOX2a(2)               <---------DAG2    --------->ANAC58      <------ZmHOX2a(2)              <---------YAB1                  <---------ANAC58   --------->ANAC46     <---------ARR14(2)             <---------ARR11(3)               <---------ANAC58   --------->ANAC58     --------->ARR14(2)             --------->ARR11(3)          <----------DOF2       <-----------GT1 ----->HVH21               xxxxxxxxxxxxxxxx>smallRNA(s) ------>ZmHOX2a(2)    <-----------GT1   acagggcgatctgatgttctatctggccgatagaagatgatccttggtggcttttggatcgtttttcttttgctttttatttccaaataaacgcccttgt  3115700                                                                           <---------------------WRI1                                                                           <---------MYB52(1)                                                                      <------MYB46(1)                                                                      <------MYB83                                                                     <---------AtMYB61                                                                     --------->MYB55(2)          <----------DOF2                                            --------->MYB59       ------>NtERF2                                                 <---------MYB46(3)             <       <---------RAP2.6(3)                                         <---------MYB52(1)               -      --------->DEAR3(1)            <---------KAN4(2)          ------>ZmHOX2a(2)                    <    ------>NtERF2               <---------HSFB2a(2)           <------ZmHOX2a(2)                     -    <---------ATERF1(1)         --------->HSFB2a(2)          <---------ARR14(2)                    <-    --------->At4g35610        <---------LBD16             --------->LBD16<-------GAMYB        <-----    <---------At4g35610   <---------AHL20(2)          --------->At4g35610<---------MYB46(3)    ------  <---------RAP2.6(2)     --------->AHL20(2) <----------DOF2 --------->ARR14(2)<---------WOX13(1)  --   aatggctgccgactttgttcaactctattttattctggaataaacgtctttgtaatagctcccgatctcgtttggtcgttgattaatacaatgcgatttt  3115800                ------>ZmHOX2a(1)                ===================================HOX2a_HOX2a       <---------ANAC46                     ------>ZmHOX2a(2)       <---------ANAC58                    --------->GLK1(1)                              <---------ANAC46       <---------ANAC58                    <---------GLK1(1)                             <------NtERF2 ---------AHL20(2)                 <------NtERF2                                         --------->ALFIN1 -------->AHL20(2)                <---------DEAR3(2)             ---------->DOF2        --------->MYB55(2) ---------AHL20(1)               <---------DEAR3(1)    <---------ANAC58                 <---------MYB46(3) -------->AHL20(1)               <---------RAP2.6(2)   <-------GAMYB                   --------->ALFIN1 --------AHL20(2)    <---------PCF2<---------At4g35610 <---------ANAC58                <---------ANAC46 ----AHL20(2) <---------ANAC58  <---------ORA47(1)    <---------MYB46(3)            <-----------RAV1(1) --->AHL20(2) <---------ANAC58  --------->RAP2.6(3)<----------DOF2               <---------ARR14(2) ------->AHL20(2)   ----------->HVH21 <---------At4g35610<---------MYB46(3)      --------->ARR14(2)   attaaattggcttatttcctgtgcgacctctgaggtcggcttctgatctctgtctttggttgttttaaaaagagattagaacatatatggtggggggaat  3115900                                                              --------->ALFIN1                                                             <-------MYC3                                                            --------->TGA1a                                                            <---------bZIP60(2)                                 <---------MYB52(1)         --------->O2                           --------->ZAT18      --------->ANAC58                           --------->ZAT14      --------->ANAC58                     --------->MYB52(1)                           <-------TEIL       ---------->DOF2------->MYC3            ------>MYB46(1)                           <---------ZAT14    ========================bZIP_DOF<------MYB46(1)  ------                           <---------ABI4(2)--------->HSFB2a(2)               <------MYB83  ---------        --------->AtLEC2<---------ANAC58    <---------HSFB2a(2)     --------->KAN4(2)------>MYB83        --------->ANAC58<---------ANAC46==============================bZIP_DOF<---------DEAR3(2)<----        --------->ANAC58<---------ANAC58<----------DOF2     <---------O2     <---------TOE1(2)<------     <------NtERF2 <------ZmHOX2a(1) <-----------GT1        <---------TGA1a <---------MYB52(1)-------   ttgaagcggcatgcatatgtaggaagacgtgcaccgttttttctttccaaaagcaatatgcaacgtggcacattcttcgttggtaccaatcggatggata  3116000                                                                      <---------ZAT2                                                                      <---------At4g35610                                                                      --------->At4g35610                                                                  --------->STY1(2)                                                                  <---------At4g35610                                                                  --------->At4g35610                                                                 --------->MYB111(1)                                                                <--------P                                                             --------->ALFIN1                      <- --->CCA1(2)                                              --------->DAG2                      <------ -->GT1                   <---------ZAT14                ---------->DOF2<---------REM1(1)    <------- ---TEIL --------->TOE2(3)--------->ZAT14             ----------------->AGL1             --------->ARR14(2) ---ARR14(2)              --------->ZAT18             <-----------------AGL1             <<<<<<<ZML2 -->ARR14(2)           <---------ANAC46         --------->MYB52(1)<---------STY1(2)      <---------GLK1(2)   cacatattggaccttagtgaggctcgagtgtacaggcccaaaatgtagactaatgggcctaaagtggtagctagctgtagcttaaaccctagaacctcgg  3116100                                         --------->ANAC46                <-----------GT1          --------->ANAC58               *TSS                    <---------ALFIN1               <---------AHL20(2)  <---------MYB52(2)              --------->AHL20(2)   --------->MYB46(3) <---------------AtSPL8           <---------AHL20(2)     --------->SPL7      --------------->AtSPL8          --------->AHL20(2) <------NtERF2       ------>ZmHOX2a(2)      <---------YAB1        ------>NtERF2--------->ANAC58<-----------GT1      <----------DOF2 ---------TaMYB80          <---------ANAC58     <---------At4g35610        <---------TOE1(3) ---LBD16 <---------AHL20(2)--------->ZAT18    <---------AGP1             <-----------GT1           - --LBD16 <---------WOX13(1)<---------ANAC58    <---------ARR11(3)     <----------DOF2             <--   gataaaccctgattaattttatctcataggcgcgcgaacgaacacgcttgatctgatttgtacaatccccttcttttaagcttttgatgacattgtccct  3116200                                                              --------->ABI4(2)                                                        ==============================MYC_MYB                                                        --------->MYB52(1)                                                       ===============================MYC_MYB                                                       ------->GAMYB                                                       --------->MYB55(1)             <---------At4g35610                                                      <---------MYB111(2)          <---------At4g35610                                                      --------->MYB46(3)         <---------ANAC46                                                      <---------MYB52(2)         <---------ANAC58       ------>ZmHOX2a(1)                              <---------MYB55(2)     --------->LBD16     ------>ZmHOX2a(2)                               ------>MYB46(1)         <-------PIF5    <------ZmHOX2a(2)                                ------>MYB83            ------->PIF5   --------->ARR14(2)                             --------->MYB46(3)        --------->O2   <---------ARR14(2)                       --------->At4g35610             <---------TGA1a <---------DEAR3(2)                         <---------At4g35610             --------->TGA1a -------->ETT(1)                         <---------At4g35610<---------MYB52(1)   <---------ANAC58 <-- ---------HVH21    --------->TOE2(3)    --------->ALFIN1-------->P          <---------O2      -------   tgtcggatcctactctcttaacctttgaaatggctgattcgagtgctgctgaaccaacaaccggtgcttcttctccccccgtggcttctgatgagaactc  3116300                                       ------>ZmHOX2a(2)                                      <------ZmHOX2a(2)                                      --------->CCA1(2)                           ------->GAMYB   <---------ZAT2                          <---------ATHB12 --------->ZAT2                          <---------MYB55(2)                          --------->MYB46(3)                         ------>MYB83<---------ARR11(3)                 --------->LBD16     --------->ARR11(3)               <---------LBD16       <---------ARR14(2)                 --------->SPL7               ------>ZmHOX2a(2)     --------->ARR14(2)                <---------MYB52(1)              ===========================HOX2a_HOX2a                  <---------SPL7              <------ZmHOX2a(2)     --------->GLK1(1)                --------->DEAR3(1)             --------->ARR14(2)     <---------GLK1(1)               <------NtERF2             <---------ARR14(2)<---------HSFB2a(2)                 ------>NtERF2      <-------TEIL --------->SPL7 <------ZmHOX2a(1)                <---------RAP2.3(1)    --------->ARR14(2)   -------->P----------->ARR10             --------->ZAT18        <---------ZAT18    <---------ARR14(2)   ------>MYB46(1)   --------->At4g35610  ------->GAMYB           <---------ZAT14 -------REM1(2)==========================HOX2a_HOX2a          ----------->RAV1(2)       --------->ZAT14 -->ZAT6  --------->MYB46(3)   --------->HSFB2a(2)          --------->MYB46(3)<----------DOF2     <--   tacccagattcaaccgatccggatgccaaccatcgaggagatccgagctcaagaggtttggaacaactgcgccgttcgcgctgttactagtggagtcatg  3116400              ------>ZmHOX2a(1)          <-----------GT1          <---------ARR14(2)          --------->ARR11(3)                                                          <------MYB46(1)          <---------ARR11(3)                                                          <------MYB83          --------->ARR14(2)                                         --------->ARR11(3)         --------->CCA1(1)                                        --------->DAG2    <---------WOX13(1)         --------->GLK1(1)                                       ---------->DOF2  --------->ATHB12         --------->RVE1(1)                                    <----------ID1     <---------YAB1  <---------At4g35610 --------->HSFB2a(2)                    <---------------------WRI1  --------->At4g35610 <---------HSFB2a(2)                 ---------->DOF2      <----------DOF2   ---- ---------HVH21   <----------DOF2                     --------------->AGL15  <-------TEIL      <-----   ggtcagttcaaatatcctctctttctcgacctatattgctccattgctctgattttccaaaaatgcgaaaagctctaggtactttgattggtttgagaat  3116500                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                              -------                                                                                              -------                                                                                              -------                                                                                              -------                                                                                              <------                                                                                              -------                                                                                             <-------                                                                                            <--------                                             <---------At4g35610                          <------MYB46(1)                                  --------->CCA1(2)                               ===================         ---------->DOF2     --------->YAB1  <---------ZAT2            --------->ZAT18    <------MYB83      ----------->GT1    <---------YAB1      --------->At4g35610       <---------ZAT18<---------ARR14(2) ------->GT1         <----------DOF2    <---------At4g35610            <---------ZAT14--------->ARR14(2) ----ZAT14     <----------DOF2 <---------ZAT6--------->ZAT2   <----------DOF2     <-----------------AG   agtgaaattggtaaagtctttagctttctaatagtgatatgcttctgagctggttattgagtcactttcagattgcacttaatagtcggatttggttagg  3116600  Previous    Next  AGI:  At3g10110.1    Description:  MEE67 (maternal effect embryo arrest 67); P-P-bond-hydrolysis-driven protein transmembrane transporter. similar to mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein [Arabidopsis thaliana] (TAIR:AT1G18320.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21400.1); contains InterPro domain Mitochondrial import inner membrane translocase, subunit Tim17/22; (InterPro:IPR003397) Range:  from: 3116115    to: 3117676    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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