Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       <------NtERF2                                                                                     --------->ATERF1(1)                                                                                    <---------RAP2.3(1)                                                                                    <---------RRTF1(1)                                                                                    <---------ATERF1(1)                                                                                    <<<<<<<<<AtERF-2                                                                                    <<<<<<<<<AtERF-1                                                                                    <<<<<<<<<AtERF-3                                                                                    <<<<<<<<<AtERF-4                                                                                    ------>NtERF2                                                                                    <<<<<<<<<AtERF-5                           --------->ZAT2                                           <---------ERF1                           <---------At4g35610                                      <<<<<<<<<AtERF-7                           --------->At4g35610                                     <---------DEAR3(1)                           <---------ZAT2                                          --------->ATERF1(2)                     <------NtERF2                                                 <---------ATERF1(2)                    <---------SPL7                                                 <---------RAP2.6(2)                    <-----------HVH21                                              <---------RAP2.3(2)                    ------>NtERF2                                                  <---------RRTF1(3)                   --------->O2                                                    <---------RRTF1(2)                   --------->DEAR3(1)                                              <---------RAP2.3(3)                   <---------DEAR3(1)                                              <---------ANAC58                   --------->RAP2.3(3)                                             <<<<<<<<<<AtTINY2                   <---------ANAC46                                                <---------ANAC46                   <---------O2                                                    <---------ANAC58                   --------->RAP2.3(2)                                            --------->ATERF1(1)                  --------->DEAR4(2)                                              --------->RAP2.6(3)                  <------NtERF2                                                   <------NtERF2                  --------->ATERF1(1)                                            <---------ERF1                  --------->RRTF1(1)                                             <---------ATERF1(1)                  --------->ERF1 --------->ANAC58                               --------->ALFIN1                  --------->ORA47(2)                                            <---------DEAR3(1)                 ------>NtERF2   --------->ANAC58                            --------->ALFIN1           <------ZmHOX2a(1)     --------->ANAC46                          <---------ZAT2  <---------ANAC46--------->RAP2.3(1)<---------GLK1(1)            *TSS     --------->ZAT2 <---------LBD16 <---------RAP2.3(1) --------->GLK1(1) ----------->GT1    --------->GLK1(2) -----RAV1(1)  --------->ZAT18 --------->MYB52(1)      <---------ZAT6<------ZmHOX2a(1)           ----   ggctacggagagaggattgcgccgtcggaagctgaacggaattcatgggtttagagagagttaaacagagaggaagaagctggtggcggctcttaataaa  3101800                         --------->MYB59               <-----------HVH21              <---------ANAC58                                --------->ZAT6              <---------ANAC58                            --------->MYB46(3)              <---------O2<------MYB83                    <---------MYB46(2)              --------->O2<------MYB46(1)          <-----------ARR10                                <              --------->ANAC46                    --------->ARR14(2)                                <              --------->ANAC55(2)      <----------DOF2   --------->ANAC46  <----------DOF2        <--   ------->GAMYB----------->HVH21  <-----------GT1<---------GLK1(2)-------->P                   <----  <---------MYB52(2)     <---------AtMYB61   <-----------GT1------>MYB46(1)<---------DAG2   ---------  --------->MYB46(3)   <---------MYB52(1)--------->AHL20(2) ------>MYB83<---------ALFIN1    <-------- ----->ANAC46 <---------ANAC55(2) <-----------GT1 <---------ARR14(2)--------->MYB46(3)      <--------   cacaacaaacaaaactacgtgaccggtttggttttttaaaccttttattaccgattctcaccaaacactaaccagcactttttttgtctgtatttaggtt  3101900                                                                                --------->ICU4                                                                                <---------YAB1  ----------->HVH21    ----------->RAV1(1)    --------->ATHB12                 <---------TOE2(3)  --------->LBD16      ------>MYB83         --------->LBD16                   --------->MYB52(1) ---------At4g35610    ------>MYB46(1)     <---------ANAC46                   --------->YAB1 ---------LBD16       --------->ANAC46     <---------ANAC58                   <-----------GT1 ---------GT1       --------->ANAC46       --------->ANAC55(2)             --------->YAB1          <- -------HVH21       --------->ANAC58       <---------ANAC58               <---------AHL20(2) ------->TEIL >MYB59             --------->ANAC58       <---------ANAC55(2)            --------->AHL20(2)<-------- -TOE1(3)     <-----------GT1              <---------ANAC55(1)        --------->AHL20(2)  --------->ANAC58 -TOE2(3) --------->AHL20(2)         <---------YAB1                   <---------AHL20(2)  --------->ANAC58   tcaccggacacataaattacaaacccaacacaaaaaactattattccgtgattagccctaatgtattgcagattaattaataacgattatggacgcactt  3102000                 --------->YAB1      <---------MYB46(3)                                                           --------->AHL20(2)   <------MYB83  <---------ICU4                                                    <---------AHL20(2)   <------MYB46(1)                                                               <-----------TBP   <---------MYB46(3)                                                          <---------AHL20(2)  <---------MYB46(3)                            <----------DOF2               <---------AHL20(2)  <---------AtMYB61                            ------>ZmHOX2a(2)         --------->AHL20(1) <--------P   --------->YAB1                 --------->ARR11(3)          <---------ARR11(3) ----------RAV1(1)       ------->TEIL        <---------ARR11(3)          --------->ARR11(3) -ALFIN1 <------ZmHOX2a(2)          --------->AHL20(2)                   <---------AHL20(1)   -------   ggtgttggtggatcattcatcatcatgtatattggaaaataaaaactgatcttttctaagttttagcaaaacaaatattttttatttatatggtctacga  3102100               <---------ANAC46               <---------TGA1a               <---------ANAC58               <---------ANAC58       <------MYB46(1)       <------MYB83       <---------ANAC46      <---------AtMYB61      --------->MYB111(2)      <---------MYB46(3)      --------->MYB46(2)  --------->YAB1                       <-----------GT1                    ---      --------->MYB111(1) <---------ICU4             <---------GLK1(1)                     --------->ANAC46      --------->MYB55(2)--------->GLK1(2)            --------->GLK1(1)                     --------->ANAC58 -->ANAC46<---------MYB46(3)         --------->REM1(1)        *TSS                         --------->ANAC58   caagaagtttggtggtgacttgagagaatcatgaaatctacaacttgtggatgagaattccagttttatcacttactctcttcttcgtctcacacacaat  3102200                                                                          --------->ZAT6                                                                        --------->MYB52(1)                                                                      <---------MYB52(2)                                                                   <---------ZAT14     <---------ALFIN1       <---------ARR11(3)                     <---------ZAT18    --------->ZAT18         --------->ARR11(3)                     --------->ZAT14               ----    <---------ZAT18   --------->ANAC58                       <---------ARR14(2)                ------  --------->ZAT18     --------->ANAC58                       --------->GLK1(2)                 <-----  <---------ZAT18 --------->ANAC58                           --------->ARR14(2)               ------- ------>MYB52(1)  --------->ANAC58        <----------DOF2   <---------GLK1(2)               <--------   taagggcacactctgaaggaaggcaaacaagaactagtcagtttctttgttttagacaacaagaatctgtgaactaacacaaaaacattgaaagaatgat  3102300                                                                           <---------MYB52(1)      --------->YAB1                                            --------->ZAT18                <----- -->ZmHOX2a(2)                                                  --------->ZAT14                <----- --->ARR11(3)                              ------>ZmHOX2a(1)    <---------ZAT18                <----- ----ARR11(3)                        ---------->ID1             <---------ZAT14                <----- -->YAB1------->TEIL             <----------DOF2                <-------TEIL              --------->WOX13(1) -KAN4(2)       <-----------GT1<---------DAG2       <----------DOF2--------->ANAC46    <-----------HVH21   cttaacaatgaaacttgttcaccctctccatcactctttgtcttcctccattccctttccctcaagtacacacatctgttatctctctctgtcaattact  3102400                                                                                  --------->ANAC58                                                                                  --------->ANAC58                                                                                 --------->GLK1(1)          --------->MYB46(3)                                                     --------->WOX13(1)-- ----ANAC55(1)                      --------->ICU4                   <---------AtLEC2            <--- ----ANAC46                    --------->ANAC58               <---------YAB1 --------->DAG2  -------- ----ANAC58                    --------->ANAC58             --------->YAB1 ---------->DOF2   -------- ----ANAC58                  ---------->DOF2             ----------->GT1<------ZmHOX2a(1)  <---------SPL7   tgtatgttttgaaccaatatcgagacatcgattaagcaaaaattgttttttttttggatttgttataatttgcaggaaaaaggcaatccaaaccgtaccg  3102500                                                               <---------DEAR3(2)                                                              <---------DEAR3(1)                                                              --------->DEAR3(1)                                                             <------NtERF2                                                             --------->ATERF1(1)                                                            ------>NtERF2                                                            <---------RAP2.6(1)                                                            <---------RAP2.3(1)                                                            <---------ATERF1(1)                                                            <---------RRTF1(1)                                                            <---------ERF1                                                           --------->DEAR3(1)                                                           <---------DEAR3(1)                                                          --------->ATERF1(1)                                                          --------->ERF1                                                          --------->RAP2.6(1)                                                          --------->RRTF1(1)                                                          --------->RAP2.3(1)                                                         <---------RAP2.3(1)                                                         <---------ATERF1(1)                                                         ------>NtERF2                  <---------DEAR3(1)                     --------->LBD16                 --------->At4g35610                    <---------DEAR3(1)                 <---------ZAT2                         --------->ANAC46                 --------->ZAT2                        --------->SPL7     <-----------GT1<------NtERF2    <---------ZAT14   <---------LBD16    --------->DOF5.7(2)   --------->DAG2          ------>ZmHOX2a(1) <-------GAMYB    <---------MYB52(1)  ---------->DOF2         <---------ANAC58<-----------HVH21          <---------ANAC58 ------->ABI4(2) <---------At4g35610 --------->ZAT14   --------->ATERF1(1)                 <---------ANAC46 ------MYB52(1) --------->LBD16  --------->YAB1 <---------ANAC58<---------MYB52(1) <---------HSFC1(2) ->SPL7         ------>NtERF2   --------->At4g35610   ------>NtERF2--------->MYB52(2)      <---------ANAC58 ->MYB52(1)   <---------LBD16   <---------At4g35610   <---------ATERF1(1)          --------->HSFC1(2)   gtgctcgttaccttctcccggctgcgaaaaggtcatcagaacagagactgtcctgcctccggcgccggtgagttgtgaagggagaagggtcttacttgga  3102600                                                                       --------->TOE2(3)                                                                       --------->TOE1(3)                   <------ZmHOX2a(2)                     <---------ANAC46                  --------->ARR11(3)                 <---------At4g35610                  <---------ARR11(3)                 --------->At4g35610------>ZmHOX2a(1)          <-----------RAV1(2)                   --------->ANAC46    <---------ARR11(3)     --------->ANAC46--------->KAN4(2)        <---------ALFIN1  --------->YAB1          <---------At4g35610   tgtcttctcgctacaggttagatcattctctattagttcttcacatctccacttaagctcagtgtatcaaaatccttagaaaatgttgttatctgattca  3102700  Previous    Next  AGI:  At3g10050.1    Description:  OMR1 (L-O-METHYLTHREONINE RESISTANT 1); L-threonine ammonia-lyase. Identical to Threonine dehydratase biosynthetic, chloroplast precursor (OMR1) [Arabidopsis Thaliana] (GB:Q9ZSS6;GB:Q9SPF1); similar to ATSR (ARABIDOPSIS THALIANA SIGNAL-RESPONSIVE), serine racemase [Arabidopsis thaliana] (TAIR:AT4G11640.1); similar to threonine dehydratase/deaminase mutant [synthetic construct] (GB:AAT74610.1); similar to threonine dehydratase/deaminase mutant [synthetic construct] (GB:AAT74611.1); similar to threonine dehydratase/deaminase mutant [synthetic construct] (GB:AAT74612.1); contains InterPro domain Serine/threonine dehydratase, pyridoxal-phosphate Range:  from: 3098730    to: 3101766    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g10060.1    Description:  immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putative. similar to immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein [Arabidopsis thaliana] (TAIR:AT1G20810.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62955.1); contains InterPro domain Peptidyl-prolyl cis-trans isomerase, FKBP-type; (InterPro:IPR001179) Range:  from: 3102162    to: 3104019    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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