Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             ------>MYB46(1)                                                                         <---------MYB111(1)                                                                        --------->ANAC55(2)            --------->DAG2                                     --------->TOE1(2)      ----------->GT1                                          --------->TOE2(2) --------->YAB1                                             --------->CCA1(2) --------->TOE2(3)                                       <---------TOE2(3) ------>MYB83 ------->GAMYB          <-------TEIL                <----------DOF2     <---------ANAC55(2) -------->MYB46(3)   <---------HSFC1(2)           <---------------AGL15 --------->ANAC46 ------>P  ---------->DOF2            <--------P  --------------->AGL15 --------->ANAC55(1) ------>WOX13(1)     --------->HSFC1(2)     <-----------ARR10<-------TEIL<---------MYB59   caaccaaaatgtataaagggagaagcttcattacttacaggttgcaagtcttctcttttaagatacatacgaacacctaatctcttagatagcttcttag  3101400                                                                                    <---------ANAC58                                                 --------->KAN4(2)                  <---------ANAC58                                                <----------TaMYB80              <---------ANAC58                                               --------->ARR14(2)               <---------ANAC58                                               <---------ARR14(2)              <---------HSFC1(2)                                               <---------ARR11(3)         --------->LBD16                                        <---------ZAT14              <---------ANAC58               <        <---------MYB46(3)              --------->ZAT14              <---------ANAC58 <---------MYB52(1)        ----------->GT1                 --------->ZAT18   --------->ARR14(2)   <---------HSFB2a(1)  <       --------->ALFIN1           --------->TOE1(3)       <---------ARR14(2)   --------->HSFB2a(1) <-       <---------AtMYB61          --------->TOE2(3)  <-----------HVH21  <---------LBD16            --     <---------ANAC46      <---------ANAC46 ----------->GT1  --------->ANAC46  --------->HSFC1(2)----   ccaattggagtggtgactcaatggcgatgtcgtaaaccttagtggacagtatattcgtcaaatactccatagcttccgcgatgcttccgttctcagcctc  3101500                                                                                              -------                                                                                             --------                                                                           <---------TOE2(3)---------                                                                         ---------->DOF2    <-------GAMYB             --------->SPL7                                          --------->ALFIN1      <---------ORA47(2)         <---------------AtSPL3                                    <---------ANAC46        <---------MYB46(3)         --------->HSFB2a(2) ================================================MYC_MYB      <---------DEAR3(1)         <---------HSFB2a(2) ------->GAMYB                         <---------O2           <---------DREB2C(2)         <---------------AtSPL8   <------NtERF2                    --------->O2           --------->ALFIN1    --------->HSFB2a(1)      <---------ATERF1(2)                   =================================MYC_MYB   --------->SPL7            --------->ANAC46                      <---------ANAC58      <------NtERF2   <---------TOE1(2)        <------------AtMYB77                   <---------TGA1a<----------DOF2   <---------TOE2(2)        --------->DEAR3(2)                     <---------bZIP60(2)   <---------ABI4(1) <---------SPL7             =================================================MYC_MYB     --------->ATERF1(1) ---------ANAC58    --------->DEAR3(1)                      --------->TOE1(3)   --------->HSFC1(2) ---------ANAC58<---------At4g35610                       --------->ARR11(3)    <---------HSFB2a(1) --------TOE1(2)<---------ZAT14 <-----------RAV1(2)       <---------ARR11(3)    <---------HSFC1(2) ------------->AtSPL3     --------->MYB52(1)    --------->ARR14(2) <---------ANAC58    <---------DEAR3(1) -------------->SPL14    ----------->HVH21      <---------ARR14(2) =================bZIP_DOF<------NtERF2   gttcgtacgttctggtacagcaccgaggtaaccggcagggtattgcaacgaattcggagagaccttaagacgtggtaaaggaagctttggaggcggtgga  3101600                                        <---------HSFB2a(2)                                      ------>ZmHOX2a(2)                                      ====================HOX2a_HOX2a                                     <------ZmHOX2a(2)                                     =====================HOX2a_HOX2a                                    --------->ARR14(2)                          --------->RAP2.6(2)                          --------->DEAR3(1)                          --------->ANAC58                          --------->ANAC46                          --------->ANAC58                          ------->GAMYB --------->LBD16                         <------------AtMYB77                         --------->DEAR3(2)                                     <---------YAB1                         --------->MYB46(3)                            <---------ALFIN1       <------                       --------->ARR14(2)                              --------->AtMYB61 --------->At5g28300                       <---------GLK1(2)--------->HSFB2a(2)        <---------ETT(1)    <---------DEAR3(1) -->ZAT14              <---------ARR14(2)                       --------->ARR14(2)    <---------ORA47(1) ->ALFIN1      <---------LBD16      <---------ARR14(2)          <---------ARR14(2) <---------WOX13(1) >ATERF1(1)   <---------LBD16<---------ALFIN1      <------ZmHOX2a(1)  --------->MYB46(3)----------->GT1   gtcatagatgtttcatctcgggacagaaccgccactgcgatccgagaacgggaggagaagtgagtgaatccgaccactggttttgatggacggtgaatgt  3101700                                                                                     --------->ATERF1(1)                                                                                     <------NtERF2                                                                                    <<<<<<<<<AtERF-1                                                                                    <<<<<<<<<AtERF-2                                                                                    <<<<<<<<<AtERF-3                                                                                    ------>NtERF2                                                                                    <<<<<<<<<AtERF-4                                                                                    <---------ATERF1(1)                                                                                    <<<<<<<<<AtERF-5                                                                                    <<<<<<<<<AtERF-7                                                                                    <---------RAP2.3(1)                           <---------At4g35610                                      <---------ERF1                           <---------ZAT2                                           <---------RRTF1(1)                           --------->ZAT2                                          <---------RRTF1(3)                           --------->At4g35610                                     <---------ANAC58                     <------NtERF2                                                 <<<<<<<<<<AtTINY2                    <---------SPL7                                                 <---------RAP2.6(2)                    <-----------HVH21                                              <---------RRTF1(2)                    ------>NtERF2                                                  <---------RAP2.3(2)                   <---------O2                                                    --------->ATERF1(2)                   --------->O2                                                    <---------ATERF1(2)                   --------->DEAR3(1)                                              <---------DEAR3(1)                   <---------ANAC46                                                <---------ANAC46                   <---------DEAR3(1)                                              <---------RAP2.3(3)                   --------->RAP2.3(3)                                             <---------ANAC58                   --------->RAP2.3(2)                                            --------->RAP2.6(3)                  <------NtERF2                                                   --------->ATERF1(1)                  --------->ORA47(2)                                              <------NtERF2                  --------->ATERF1(1)                                            <---------ATERF1(1)                  --------->RRTF1(1)                                             <---------ERF1                  --------->RAP2.3(1)                                           --------->ALFIN1                  --------->ERF1 --------->ANAC58                               <---------DEAR3(1)                 <---------RAP2.3(1) <---------GLK1(1)                       --------->ALFIN1           <------ZmHOX2a(1)     --------->ANAC58                          --------->ZAT2  <---------ANAC46--------->DEAR4(2) --------->GLK1(1)            *TSS     <---------ZAT2 <---------LBD16 ------>NtERF2   --------->ANAC46      <---------ZAT6<------ZmHOX2a(1) -----RAV1(1)  --------->ZAT18 --------->MYB52(1)      ----------->GT1    --------->GLK1(2)      ----   ggctacggagagaggattgcgccgtcggaagctgaacggaattcatgggtttagagagagttaaacagagaggaagaagctggtggcggctcttaataaa  3101800                         --------->MYB59               <-----------HVH21              <---------ANAC55(2)                             --------->ZAT6              <---------ANAC58                            --------->MYB46(3)              --------->ANAC55(2)                         <---------MYB46(2)              --------->O2<------MYB46(1)          <-----------ARR10                                <              <---------O2<------MYB83            <---------ARR14(2)                                <              --------->ANAC46         <----------DOF2   --------->ANAC46  <---------DAG2         <--   ------->GAMYB----------->HVH21  <-----------GT1--------->ARR14(2)--------->MYB46(3)          <----  --------->MYB46(3)     <---------AtMYB61   <-----------GT1------>MYB83<---------ALFIN1    <--------  <---------MYB52(2)   <---------MYB52(1)--------->AHL20(2) ------>MYB46(1)<----------DOF2  --------- ----->ANAC46 <---------ANAC58    <-----------GT1 <---------GLK1(2)-------->P               <--------   cacaacaaacaaaactacgtgaccggtttggttttttaaaccttttattaccgattctcaccaaacactaaccagcactttttttgtctgtatttaggtt  3101900                                                                                --------->ICU4                                                                                <---------YAB1  --------->LBD16      ----------->RAV1(1)    --------->ATHB12                 <---------TOE2(3)  ----------->HVH21    ------>MYB46(1)      --------->LBD16                   <-----------GT1 ---------At4g35610    ------>MYB83        <---------ANAC58                   --------->YAB1 ---------LBD16       --------->ANAC46     <---------ANAC46                   --------->MYB52(1) ---------GT1       --------->ANAC58       <---------ANAC58                --------->YAB1          <- -------HVH21       --------->ANAC46       <---------ANAC55(1)            --------->AHL20(2) ------->TEIL -TOE2(3)           --------->ANAC58       --------->ANAC55(2)            <---------AHL20(2)<-------- >MYB59       <-----------GT1              <---------ANAC55(2)        --------->AHL20(2)  --------->ANAC58 -TOE1(3) --------->AHL20(2)         <---------YAB1                   <---------AHL20(2)  --------->ANAC58   tcaccggacacataaattacaaacccaacacaaaaaactattattccgtgattagccctaatgtattgcagattaattaataacgattatggacgcactt  3102000                 --------->YAB1      <---------MYB46(3)                                                           --------->AHL20(2)   <------MYB46(1)                                                                 <---------AHL20(2)   <---------MYB46(3)                                                            <-----------TBP   <------MYB83  <---------ICU4                                                <---------AHL20(2)  <---------MYB46(3)                            <----------DOF2               <---------AHL20(2)  <---------AtMYB61                            ------>ZmHOX2a(2)         <---------AHL20(1) <--------P   --------->YAB1                 --------->ARR11(3)          --------->AHL20(1) ----------RAV1(1)       ------->TEIL        <---------ARR11(3)          --------->ARR11(3) -ALFIN1 <------ZmHOX2a(2)          --------->AHL20(2)                   <---------ARR11(3)   -------   ggtgttggtggatcattcatcatcatgtatattggaaaataaaaactgatcttttctaagttttagcaaaacaaatattttttatttatatggtctacga  3102100               <---------ANAC58               <---------ANAC46               <---------TGA1a               <---------ANAC58       <---------ANAC46       <------MYB46(1)       <------MYB83      --------->MYB55(2)      <---------MYB46(3)      --------->MYB46(2)      --------->MYB111(2) --------->YAB1                       <-----------GT1                    ---      --------->MYB111(1) <---------ICU4             --------->GLK1(1)                     --------->ANAC58      <---------AtMYB61 --------->GLK1(2)            <---------GLK1(1)                     --------->ANAC58 -->ANAC46<---------MYB46(3)         --------->REM1(1)        *TSS                         --------->ANAC46   caagaagtttggtggtgacttgagagaatcatgaaatctacaacttgtggatgagaattccagttttatcacttactctcttcttcgtctcacacacaat  3102200                                                                          --------->ZAT6                                                                        --------->MYB52(1)                                                                      <---------MYB52(2)                                                                   <---------ZAT14     <---------ALFIN1       <---------ARR11(3)                     --------->ZAT14    --------->ZAT18         --------->ARR11(3)                     <---------ZAT18               ----    <---------ZAT18   --------->ANAC58                       --------->ARR14(2)                <-----  --------->ZAT18     --------->ANAC58                       <---------ARR14(2)                ------  <---------ZAT18 --------->ANAC58                           --------->GLK1(2)                ------- ------>MYB52(1)  --------->ANAC58        <----------DOF2   <---------GLK1(2)               <--------   taagggcacactctgaaggaaggcaaacaagaactagtcagtttctttgttttagacaacaagaatctgtgaactaacacaaaaacattgaaagaatgat  3102300  Previous    Next  AGI:  At3g10050.1    Description:  OMR1 (L-O-METHYLTHREONINE RESISTANT 1); L-threonine ammonia-lyase. Identical to Threonine dehydratase biosynthetic, chloroplast precursor (OMR1) [Arabidopsis Thaliana] (GB:Q9ZSS6;GB:Q9SPF1); similar to ATSR (ARABIDOPSIS THALIANA SIGNAL-RESPONSIVE), serine racemase [Arabidopsis thaliana] (TAIR:AT4G11640.1); similar to threonine dehydratase/deaminase mutant [synthetic construct] (GB:AAT74610.1); similar to threonine dehydratase/deaminase mutant [synthetic construct] (GB:AAT74611.1); similar to threonine dehydratase/deaminase mutant [synthetic construct] (GB:AAT74612.1); contains InterPro domain Serine/threonine dehydratase, pyridoxal-phosphate Range:  from: 3098730    to: 3101766    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g10060.1    Description:  immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putative. similar to immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein [Arabidopsis thaliana] (TAIR:AT1G20810.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62955.1); contains InterPro domain Peptidyl-prolyl cis-trans isomerase, FKBP-type; (InterPro:IPR001179) Range:  from: 3102162    to: 3104019    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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