Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   --------->LBD16                                                --------->ANAC46                                                --------->ANAC58        <---------ALFIN1                                             <---------ARR14(2)      --------->ANAC58                                           ----------->HVH21         --------->ANAC58                                       <---------ARR14(2)            --------->ANAC46                                     --------->LBD16                 ------->GAMYB                                    --------->HSFB2a(2)              --------->DEAR3(1)                                    <---------HSFB2a(2)              --------->DREB2C(2)                                    <---------ANAC55(2)              --------->RAP2.6(2)                                    --------->ANAC46                --------->DEAR3(2)                                    --------->ANAC55(2)             <------------AtMYB77                                   <---------LBD16                  <---------MYB55(2)                                   ------>ZmHOX2a(2)                --------->MYB46(3)                                   ============================HOX2a_HOX2a<------NtERF2        --------->LBD16           =============================HOX2a_HOX2a--------->MYB46(3)       --------->LBD16            <------ZmHOX2a(2)           <XXXXXXXXXXXXXXXXXXXXXXXMIR404      <---------LBD16            <---------ARR14(2)     ------>ZmHOX2a(1)------>NtERF2  --------->At4g35610            --------->ARR14(2)  <------ZmHOX2a(2)  --------->AtMYB61  <---------At4g35610          --------->LBD16  --------->ANAC58   <---------ATERF1(1) <---------DEAR3(2)           ------->GAMYB--------->ANAC46 <---------DEAR3(1)       ----------->HVH21 --------->MYB52(2)          ----------------->AGL1 --------->ARR14(2)  --------->DEAR3(1) --------MYB52(1)            <-----------------AGL1 <---------ARR14(2)<-----------HVH21 ---------TGA1               <---------LBD16 --------->ARR14(2)--------->ANAC46    ----------->GT1 ---------HVH21             --------->MYB52(1) <---------LBD16<------NtERF2        <---------ANAC58 ----->ANAC46               -------->P --------->ARR14(2) <-----------HVH21        <---------ANAC58   cgtcagttcccgcgctgtcttcagggttgcaaccggatccggaacccgacccgcgatcctcgtcgtcgcaaccgccaccgctaatgggtgacatttgttt  3097700                                               <------MYB83                                              <---------AtMYB61                                           --------->MYB52(2)                                           --------->MYB111(2)                                           <---------MYB46(3)                                   --------->At4g35610                                   <---------ZAT2                                   --------->ATERF1(1)                                   <-------GAMYB                                   <---------At4g35610     <---------AtMYB61                                   --------->ZAT2          --------->ALFIN1                                   <------NtERF2  --------->ETT(2)                                  <---------DEAR3(2)    <---------DEAR3(1)                                  <---------ATERF1(1)   --------->ALFIN1                                  <---------RAP2.3(1)   <---------AtMYB61                                  ------>NtERF2<------MYB46(1)<---------ANAC46                                  <---------MYB46(3)   <------NtERF2                                  <---------ERF1<-----------HVH21                                 <---------RAP2.3(2)  --------->LBD16                                 <---------RAP2.3(3) --------->DEAR3(1)                                 <---------RAP2.6(2)--------->ATERF1(1)                      <------ZmHOX2a(1)    <-----------RAV1(1)<---------ZAT6                    <---------TOE2(3)      --------->MYB55(2) <---------REM1(1)             ----------->GT1     --------->ATERF1(2)<------NtERF2          <---------ARR14(2)          --------->ALFIN1       <---------ATERF1(2)<---------LBD16--------->ICU4         <---------SPL7          <---------DEAR3(1)<---------ATERF1(1)    <------ZmHOX2a(1)        <---------ANAC58        <---------LBD16<---------MYB46(3) <---------TOE2(3)        <---------ANAC58       <---------RAP2.3(1)<---------DEAR3(1)<------ZmHOX2a(1)        <---------ANAC46  <---------AHL20(2)<-------GAMYB<---------ZAT2 <---------TOE2(3)         <--   gggttttgaggcgtatgggtataaggattttatcggcggctgagtttgttggtcgccggaggtggtgtaaggatgaggatgctggaactgaattgaattt  3097800                   <------NtERF2                 <---------RAP2.6(2)           <---------ARR14(2)           --------->ARR14(2)      <---------ANAC46      <------MYB46(1)                                                                            ----      <------MYB83--------->LBD16                                                        --------->TOE2(3)     --------->MYB111(1)                                                                 <-----------     <---------AtMYB61       --------->At4g35610                                         --------->TOE1(3)  --------->ARR14(2)         <---------At4g35610                                       ------->TEIL  <---------ARR14(2)   <-----------ARR10                                             --------->ZAT14 -------LBD16   <---------LBD16                      --------->LBD16               --------->ANAC46   tggggatttggtggattttgcggcatttctaagctcaacattcttggactaaacccagagaacatcacattcgattccatcaaacactgaaccctaaatt  3097900                                                    --------->AtMYB61                                                   <---------MYB52(2)                                                   --------->MYB46(3)                                             --------->GLK1(1)                                            <---------GLK1(2)                                         --------->ANAC46                                         <---------ANAC55(2)                                         --------->ANAC58           --------->GLK1(1)                                         --------->ANAC55(2)        <---------GLK1(1)    <---------AHL20(2)                   --------->ANAC58    --------->GLK1(1)                   <---    --------->AHL20(2)                   --------->ANAC55(1)--------->ARR14(2)             <---------ETT(1) ------->GT1               <--------P <---------REM1(2)     <---------GLK1(2)          <---------GLK1(1) ------AGL3        <<<<<<<<<<<<<<<<<LFY <---------LBD16     <---------ARR14(2)         --------->GLK1(1)   ggataaaaaattgaaacttggaaacaatggtagataaatcaacacggaatcccacaaacccagatttcgaatttccgacgaagtaagagaattccgacag  3098000              --------->ARR14(2)              --------->ARR11(3)              <-----------ARR10              <---------ARR14(2)             <---------ARR14(1)                                                      <------------CBF         --------->ZAT14                                                    *TSS <---------LBD16         <---------ZAT14                                                 <---------ANAC46     -------         --------->ZAT18                                                 <---------bZIP60(2) <-------         <-------TEIL  <---------ARR11(3)                              <---------ZAT14       <-------     <---------------AtSPL8   <----------DOF2              --------->ARR11(3)    <---------ANAC46 ---ZmHOX2a(1)<---------ARR11(3)   <---------TOE2(3)       <---------ARR11(3) <---------ARR14(2)   gaatttgtaagtacagtatcttcgagttcttacttttaagttttgtttagtttgtgttgaagatgttttttggtgaagtggtttcgggattggagtcaaa  3098100                                                                  --------->At4g35610                                                                 --------->ARR11(3)                                                               ----------->ARR10                                                       <---------WRKY12                                                      <------NtERF2------>ZmHOX2a(2)                                                     <-----------HVH21                                                     <---------RAP2.6(3)                                                    --------->RAP2.3(3)                                                    --------->RAP2.3(2)                                                    --------->DEAR3(1)                                                    >>>>>>>>>AtERF-4                                                    >>>>>>>>>AtERF-3                                                    --------->RAP2.6(2)                                                   <------NtERF2 <---------ARR11(3)                                                   --------->RAP2.3(1)                                        <---------MYB46(3)   >>>>>>>>>NAM                         <--                                       <---------AtMYB61---------->DOF2                           <--    ---------->DOF2                --------->ZAT14 --------->ATERF1(1)                           ---- --->DOF2                          <---------ZAT14<---------At4g35610                    ---------->ID1 --WRKY12 ----------->GT1          --------->ZAT18<---------ATERF1(1)                    <---------TOE2(3) --WRKY38(1)                   <------ZmHOX2a(1)  --------->At4g35610                  <---------ANAC46   ggaagagaaagagagtaatatacagagaagagaggagagcagtggttttgggagccgtcaaagggatgatctgaaaactgcccatggttttgtggttttt  3098200           <---------DAG2           <----------DOF2                                                 <----------DOF2          --------------->AGL15                                           <-----------------AGL1          <---------------AGL15                                           <-----------------AGL3         <-----------------AGL2                                           <---------DAG2         ===================================================================================MADS_MADS         <-----------------AGL1                                         ------>NtERF2         ----------------->AG                                         --------->ATERF1(1)         ----------------->AGL1                                      <---------At4g35610        <-----------------AGL1                                       <---------ZAT2       <-----------GT1                  --------->MYB52(1)           --------->At4g35610          <-- -------TOE2(3)               --------->ANAC58  <------MYB46(1)  <---------ATHB12                <--- -------TOE1(3)               --------->ANAC58  <------MYB83   --------->MYB52(1)             <------ ------>DOF2               <---------ATHB12   <-----------------AGL1 --------->ZAT2>>>>>>>>>>>>>>>>>LFY   aaagttttgtttcctttttgggattacaaatcaagcctaaaccaaggggctggttttggcaaaaccaatggagctgcctttttttggccactgtttttac  3098300                            <---------DAG2                       <---------MYB46(2)                       <---------MYB59 <---------RVE1(1)                     ------>MYB46(1)   <---------CCA1(1)                       <-----------ARR10                     ------>MYB83     <---------GLK1(2)                        <---------ARR11(3)            --------->AHL20(2)        <---------ARR11(3)                       --------->ARR14(2)        <---------ATHB51 ------>MYB46(1)                                       <---------ARR14(2)        <---------ATHB12 ------>MYB83 --------->ARR11(3)         <---------AHL20(2) --------DOF2        -------->P --------->YAB1                  --------->AHL20(2)   <----------DOF2 ------DAG2 --------->YAB1  <----------DOF2      <---------AHL20(2)            --------->GLK1(2)<---- -----GT1--------->YAB1<---------MYB111(1)    --------->TOE2(3) <---------AHL20(2)   <---------DAG2   ctttctgccaataataaaaatccaacctaacttttcataagatttttttcttaaattttttcacaaataaatgaaaaacagtatctgcttttttgatttc  3098400                                                                          --------->MYB52(1)                                                                  --------->ATHB12                                                                  <---------ICU4                                                                 <---------YAB1                                                                 --------->ICU4                                                               <--------HAHB4                       --------->ARR14(2)  <---------AHL20(2)  --------->YAB1                       -           --------->AHL20(2)              <---------AHL20(1)  -------->ATHB1                       <       <---------AHL20(2)     --------->ARR14(2)               <---------ICU4                       -      <---------AHL20(2)     --------->GLK1(1)              --------->WOX13(1)                     --  <----------DOF2      <---------ARR14(2)  --------->AHL20(2) <---------ATHB12                     --  <---------DAG2       --------->GLK1(2)   --------->AHL20(1) --------->ICU4 ----------->GT1     ---- -------GT1<---------AHL20(2)<---------GLK1(1)  --------->AHL20(2)--------->ATHB51           --------   acaacttttttatttatatcatacaaatctgaaatctgcatacaataaaataaaacaaatatcaatcattattgaaaaacggtttaaaacatcgattaaa  3098500                              --------->ATHB12     --------->YAB1           -------->HAHB4   ------>MYB46(1)            <--------ATHB1   ------>MYB83               --------->YAB1 ------->GAMYB                <---------ICU4 --------------->AGL15       <---------YAB1 <---------------AGL15       <---------ATHB12 ---------------->AGL2       --------->ICU4                               --------->TOE2(3) -----------------AGL3  --------->ANAC46           --------->TOE2(3)      --------->TOE1(3)         - ---------------->AGL3 --------->LBD16             --------->TOE1(3)      --------->YAB1      ------- ------->ANAC58       ------->GAMYB             ------>NtERF2            <---------ATHB12 ------->GAMYB ------->ANAC58     <---------At5g28300<---------DAG2                   ------>MYB83     --------->MYB46(3) ----->MYB46(3)    <-----------GT1     <----------DOF2                  ------>MYB46(1) --------->ANAC58 ->AHL20(2)<-----------GT1------------>ATHB5<-----------GT1    <-----------HVH21        --------->ANAC58   caaccaaatatagtaactgtttaaccgcgtaatgattgtgacttttttgccagccttaaactgagagtcagaccaatcttaaactgagacaaccaaaaat  3098600  Previous    Next  AGI:  At3g10040.1    Description:  transcription factor. similar to transcription factor [Arabidopsis thaliana] (TAIR:AT1G21200.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16002.1) Range:  from: 3096420    to: 3098076    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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