Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  --------->ANAC58                                --------->ANAC58                                --------->ANAC46 ----------RAV1(1)         <---------ZAT18                                                 --------->MYB52(1) ->NtERF2                  --------->ZAT18                                            <---------YAB1 ----RAP2.6(2)            <---------ANAC58           <--------P                ------>ZmHOX2a(1) ----ANAC46               <---------ANAC46       <-----------RAV1(2)        ------>ZmHOX2a(1) >ALFIN1                  <---------ANAC58 --------->ZAT14                 <---------ALFIN1--------->YAB1 -RAV1(1)               <---------ANAC46<---------ANAC46                 <---------ATERF1(1)   actgtggcattggccagagccaagagttgtgtacaagacatgttgtatagtccaggtaagttttcaagactaagcctcctcctgtatgatcaataacagt  3087800                        ----------->GT1                     ----------->GT1                   ---------->DOF2               ------>ZmHOX2a(1)              --------------->AGL15    --------->ANAC46         --------->ANAC46              <---------------AGL15    --------->ANAC58      <------ZmHOX2a(2)             ----------------->AGL3    <---------ANAC55(2)  --------->ARR11(3)                   <---       <---------ARR11(3)              --------->ANAC58 ---------->DOF2                        <-----       --------->ARR11(3)              --------->ANAC55(2)  <---------ARR11(3)          <---------AHL20(2) <---------At4g35610--------->DAG2     --------->ANAC55(1) --------->YAB1               --------->AHL20(2)   ttcagttaacatctctccttataaagtagaaaataactaaaacgtaattgcatagacacaaagatcacacagccaaaaccagttcatcaaaaaattgctg  3087900        <---------ARR11(3)        <-----------ARR10                                              <----------DOF2        --------->ARR11(3)                                      <-----------GT1       <---------CCA1(2)                                    <---------AHL20(2)                <------     --------->ANAC55(2)                                   <---------AHL20(2)            --------->MYB52(1) ------ANAC46                               ----------->GT1--------->AHL20(2)       <-----------GT1 ----ANAC46                               ----------->GT1 <---------WOX13(1)      --------->AHL20(2)   tgtgtttacatatctcagtttttgcatttactcatgttttgaagaagtgaaaaatgtttgatttattttcttccttttgcagaatttaacaaaacagaat  3088000                    --------->LBD16                   --------->LBD16                  <---------ANAC58                  --------->HSFB2a(2)                  <---------HSFB2a(2)                                                 <---------AtLEC2                  <---------ANAC46                                                    <---------ANAC46                  <---------ANAC58                                               <-----------RAV1(1)                  <---------LBD16                                            <-------GAMYB                 <---------LBD16                                            <---------MYB46(3) <-----               <---------ARR14(2)                                          <---------YAB1     <------               --------->GLK1(2)           <---------MYB52(1)              <---------AtMYB61  -------          ----------->GT1                 <-------GAMYB            ==========================RAV      <---------ARR14(2)                --------->MYB59            <-----------RAV1(2)<---------ANAC58 ---GLK1(2)  <---------GLK1(1)  ----------->GT1                  <-----------HVH21    <---------ANAC58   caccagaaaatatggaaattccgggagaagaacagagtaaattcggttgagtcacaaaacctgtctgagtcaggctgatggttgtgttgcatgttattaa  3088100                                                                                        <---------ALFIN1                                                                                      ------>MYB83                                                                   <----------DOF2    ------>MYB46(1)                                                               <---------GLK1(2) <-----------GT1                                                          --------->TOE1(3)   --------->TGA1a           <-----------RAV1(1)                           --------->ZAT6       =======================  <-----------GT1                          <--------P  <-----------GT1        --------->ANAC46 ----AHL20(2)               --------->ARR11(3)      <----------DOF2=====================bZIP_DOF ---AHL20(2)                <---------ARR11(3)      ====================================bZIP_DOF -->AHL20(2)            --------->REM1(2)  =============================================MYC_MYB     <   atattgactgttcttgtggcagaccatgtagaacttctgtctctggttgtctccctttaaccctagcttctttctctctcacttcaccttccacttccat  3088200                                                   ----------->RAV1(2)                                             <---------AHL20(2)                                             --------->AHL20(2)          <---------ANAC58                                            <---------AHL20(1)           <------------CBF                       ------>ZmHOX2a(1)    --------->AHL20(2)           <---------ANAC58                --------->ANAC55(2)     <---------YAB1                  --------->ATHB12             =================HOX2a_HOX2a   <---------AHL20(2)       <------------CBF             <------ZmHOX2a(2)         ------------>CBF        <-------TEIL  <---------YAB1            --------->ARR11(3)        --------->YAB1          --------->CCA1(2)            <---------ARR11(3)   ------------>CBF<-----------GT1    --------->DAG2           -------- ==========bZIP_DOF ---------->ID1   <---------ATHB12        <---------ARR14(2)          --------->At4g35610 ----------DOF2 <---------ANAC55(2)--------->WOX13(1)        --------->ARR14(2) <---------YAB1     --   ttcttttgaaccaagatcacttgtcctcttctctgttcaatcacaattaatttacctgtggaagatacaaaaattgattgtgattcttggccactgaaag  3088300                                   <------MYB83                                   <------MYB46(1)                                   ----------->GT1                                   --------->At4g35610                                  --------->MYB46(2)                                  --------->MYB111(2)                                  <---------MYB46(3)                                  --------->MYB111(1)          --------->AHL20(2)                                  --------->MYB55(2)           <---------AHL20(2)                                 <--------P         --------->ARR11(3)                                 <---------MYB55(1) <-----------ARR10             ---------->DOF2                              <---------AtMYB61     <---------ARR11(3)        <------------CBF -->DOF2    ---------->DOF2 <---------MYB46(3)      --------->GLK1(2)      ------------>CBF ---------->CBF           <-------GAMYB        ------>ZmHOX2a(1)     ------------>CBF            ----   aaacaatatttggagaaagaagtgattcggttgtggtaggtgaaacctcctcaaaatcttttcattttaatgtcaatttcaattgaaagggatagagaac  3088400                         <---------GLK1(2)                         --------->ARR14(2)           <---------ANAC46           <---------ANAC58                                                                        --           <---------ANAC58           <---------AHL20(2)                                           --     --------->ARR11(3)  <---------ARR14(2)       ---------->DOF2  <------ZmHOX2a(1)       <---------REM1(1) -------->CBF       --------->MYB52(1)--------->AHL20(2)        <-----------RAV1(2)   ---------->DOF2   tcaattagttcttgagtgaaaataacagatttgattacatttatttgaaaatgaaagcttgaagttgcaggagagattaccagagagaaaaagatgaagc  3088500   --------->ANAC58                                                                              <---   --------->ANAC58                                                                  <-------TEIL<--- ------->ANAC58                                                           <------ZmHOX2a(1)   <------ ------->ANAC58                                 <---------TOE2(3)       <---------TOE2(3)  ----------   caagtaagccagagtcaagtcttgtgagtttcagagtccagacaaaatttgagataatagtttatagagactataaggaagacaatatacatgaagttac  3088600                                                           <---------DAG2                                                           <----------DOF2                                                        <-----------GT1    --------->AHL20(2)                                                      <-----------GT1      <---------AHL20(2) ---------->ID1                                <----------DOF2            --------->AHL20(1) ------DAG2           ------>ZmHOX2a(1)        ------>ZmHOX2a(1)          --------->AHL20(2) -------DOF2         --------->TOE2(3)        --------->TOE2(3)           <---------AHL20(1)   <----- -----GT1    <---------ARR14(2)            --------->ARR14(2)             <---------AHL20(2)<-------- ->GT1       --------->ARR14(2)            <---------ARR14(2)    <----------DOF2      <----------DOF2   tttttcgtttttgcaaatccagtccttaattttctccaaaatacaaatcctttgtttttcactttttctttgcaaatttaattcccttctttatattatg  3088700  Previous    Next  AGI:  At3g10010.1    Description:  DML2 (DEMETER-LIKE 2); 4 iron, 4 sulfur cluster binding / catalytic/ endonuclease. Identical to DEMETER-like protein 2 (DML2) [Arabidopsis Thaliana] (GB:Q9SR66); similar to DML1/ROS1 (REPRESSOR OF SILENCING1), DNA N-glycosylase/ DNA-(apurinic or apyrimidinic site) lyase/ protein binding [Arabidopsis thaliana] (TAIR:AT2G36490.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15969.1); contains InterPro domain DNA glycosylase; (InterPro:IPR011257); contains InterPro domain HhH-GPD; (InterPro:IPR003265); contains InterPro domain Iron-sulphur cluster loop; (InterPro:IPR003651) Range:  from: 3081819    to: 3088200    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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