Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        <---------ARR14(2)                                                                                      --------->ARR14(2)                                                                               --------->CCA1(2)                                 --------->HSFC1(2)                            <----------TaMYB80                       ------>NtERF2                                           <---------GLK1(1)                     ----------------->AGL1                                   --------->ARR14(2)                    ------>NtERF2<---------HSFC1(2)                           <---------ARR14(2)                    <---------ATERF1(1)                                     <---------MYB46(3)                   --------->RAP2.6(2)                                  <---------AtMYB61                  <---------RAP2.6(2)                      <---------YAB1  <---------ANAC46         <        <---------YAB1--------->RAP2.6(2)              <---------WOX13(1)<---------MYB46(3)  <------- --------->DOF2  --------->At4g35610            <---------ANAC58        <---------DEAR3(1)  <-------- ----->GT1       <---------At4g35610            <---------ANAC46        --------->ALFIN1 <---------ALFIN1 --->YAB1       --------->MYB52(2)              <---------ANAC58    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   taaaaagactattgttgttagcggccaccatgggaaacttcacatcgatggcttgagattgatcatcgatgaaggtggtggatataccgatacacctttg  3063400                                        <---------MYB52(1)                                    ------>NtERF2                                   <---------ALFIN1                                 <---------ATERF1(1)                                 ----------->RAV1(1)                                 <-----------HVH21                                 ------>NtERF2                                ----------->HVH21                                --------->ANAC46        <---------ANAC55(2)                               --------->LBD16          <---------TOE2(3)                              --------->ANAC46        --------->AHL20(2)                   --------->HSFB2a(2)                             <---------LBD16         <---------ATHB12                      <---------HSFB2a(2)                            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)              <---------YAB1 ------NtERF2              --------->ARR14(2)    ----------------->AG        --------->AHL20(2) ---DOF2                   <---------ARR14(2)  <-----------GT1               <---------AHL20(2) -DAG2                  <---------GLK1(2)    <---------ICU4  --------->ARR11(3)           <xxxxxxxxxx   gctgcaattgttcttccttctaagaagattatccgcgacaccgataatttttccaattaagtatatcatgtcttcatattaaaattgaaacttctagtag  3063500                                                 <---------MYB52(1)                                                 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                <---------At4g35610                                                --------->LBD16                                               --------->ANAC46                                          <----------DOF2                                          xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                                  ----------------------->TaNAC69(2)                                 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                         --------->AHL20(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                 <---------------AGL15                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                  ----------------->AGL2                     <---------DAG2    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)----------------->AGL3                     <----------DOF2xxxxxxxxxxxxxxxx>smallRNA(i)            <-----------------AGL2                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)    <-----------GT1  <-----------------AGL3               <---------MYB46(3)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)       ----------------->AG              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <---------ANAC46        ----------------->AGL1             <-------GAMYB   xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)        <---------AHL20(2)            <-----------RAV1(1) <---------ZAT6<---------LBD16         --------->AHL20(2)      <---------WOX13(1) <---------AHL20(2)xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)--------------->AGL15   <---------YAB1 <-----------GT1<xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  <---------AHL20(2)        <---- xxxxxxxxxxxxsmallRNA(fl3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)     <---------AHL20(1)   ----------   tttttgtgattgttctgttgttactttttaattagtgtttcggtcttttccgctacttgtataacttgataatttttttccaaaattagaaaatggtata  3063600                                                                         ------>MYB46(1)                                                                       <---------MYB111(2)                                                                       --------->MYB46(3)                                                                       --------->AtMYB61                                                                       <---------MYB111(1)                                                           <---------ANAC58                     <---------AHL20(2)                    <---------ANAC58                     --------->AHL20(2)         <---------ANAC58       <---------ALFIN1              ----------->GT1                   <---------ANAC58   --------->MYB46(3)              <---------YAB1                    <---------AtLEC2  ------->TEIL    ----------->GT1 -------GT1<---------MYB52(1)     ----------->GT1      <---------MYB52(1)------>MYB83  --------->CCA1(2) ->GT1--------->ZAT6--------->AHL20(2)     <----------DOF2<---------At4g35610  ---------->DOF2   actacttaacactgttatgaaaaaaaattttgaaacttgtaaattcttttgcatgttgttagcttatgaaccaccaacttagaaaggagataagaagaag  3063700                                                                                                -----                                                        ---------->DOF2                         -----                                               ----------->TBP                           <---------ICU4                               <---------YAB1  --------->AHL20(2)              *TSS     <---------YAB1                               --------->ICU4 <---------AHL20(1)               <-------TEIL     -----                          ----------->GT1     --------->AHL20(1)       --------->ZAT18--------->YAB1                --------->AtMYB61          --------->AHL20(2)     ---------->DOF2    <---------YAB1   ctaagaaaaactagacgaccaaaaaaacatgttattatttcgaaataatatatatagccaaaggcccatgaagcccacaagtacattatcatcatttcaa  3063800                                            <-----------HVH21                                        ------>ZmHOX2a(2)                                       <---------At4g35610                                       --------->At4g35610                                      <---------ARR11(3)                                      --------->ARR11(3)                                      <---------ARR14(2)                             <---------MYB52(2) <------NtERF2                             --------->ANAC58 <---------ANAC46                             --------->ANAC58 <---------DEAR3(1)<---------ANAC55(2)                 - ---->ANAC46        <------NtERF2     --------->ARR14(2)        --------->ANAC55(2)                 < ---->ANAC58      <---------ANAC46 --------->At5g28300         <-------TEIL              <---------ANAC58 ---->ANAC58 --------->MYB52(1)--------->MYB52(1)      <-------TEIL   ---------->DOF2    <---------ANAC58   gaaacagagagagactaatggcgcaaaaaccacgaacggtgatctgcgtcggagacatccatggatacatatcaaagctcaataacctctggcttaatct  3063900                                     <-----------TGA1                               --------->ZAT2                          --------->ZAT2                          --------->At4g35610                          <---------At4g35610                             --------->ARR14(2)                          <---------ZAT2                                --------->LBD16             --------->MYB46(3)<---------ZAT2 <---------ANAC58        <---------LBD16         --------->DEAR3(1)    <---------At4g35610                 --------->WRKY38(1)         --------->MYB46(3)    --------->At4g35610                 --------->WRKY12             ----- -------->ARR14(2)   --------->GLK1(1)        <---------ANAC58  ------>ZmHOX2a(2)  --------->DAG2 ---------ARR14(2)   <---------GLK1(1)   <----------TaMYB80    <------ZmHOX2a(2)  ---------->DOF2   ccaatctgccatcgacccatcagatttcagctcagctctcgtcatattccttggcgattactgcgatcgtggaccggagactcgaaaagtcatcgatttc  3064000                                                 <------NtERF2                               --------                 --------->HSFC1(2)             --------->HSFB2a(2)                   <-------GAMYB <            <------NtERF2                       ------>NtERF2                        ================           --------->LBD16                      --------->LBD16                      --------->MYB52(2)          <---------ANAC46                     --------->LBD16                       <---------MYB46(3)         <---------LBD16                       <---------LBD16                  <---------TOE1(2) <--        ------>NtERF2  --------->LBD16 <----------DOF2                          <---------TOE2(3) ---       <-----------RAV1(1)<------ZmHOX2a(2)   <---------LBD16         <---------LBD16<-----------RAV1(1) ---->TOE2(3)    <---------HSFC1(2)<---------CCA1(2)        <----------DOF2     <---------TOE2(2) ===   ttaatctctctgccggagaaacatcccgatcaaactcatgtctttctcgccgggaaccatgactttgccttctctgggttcttaggtttgttgcctcgtc  3064100                        <---------ANAC58                        <---------ANAC58                        <---------ANAC55(2)                        <---------ANAC55(1)         ------>ZmHOX2a(2)         ==============================HOX2a_HOX2a         ==================HOX2a_HOX2a        <---------At4g35610       <---------AGP1   <---------O2                                                    --------->CCA1(2)       ------->TEIL     <---------ANAC46                                               <---------ARR11(3)       --------->ARR14(2)                                                              --------->ARR14(2)       <---------ARR14(2)       <------ZmHOX2a(1)                        ----------->HVH21  --------->At4g35610  <-------TEIL                                      --------->ALFIN1  <---------At4g35610 --------->CCA1(2)                                --------->At4g35610          < ->bZIP60(2)         <---------ARR14(2)                                <---------At4g35610   ------->TEIL -----------RAV1(2)  --------->ARR14(2)                        ----------->GT1         <---------ARR14(2) ===========RAV     <------ZmHOX2a(1)             <------ZmHOX2a(1)  <-----------RAV1(2)--------->GLK1(1) ---------HVH21   <---------TOE2(3)        --------->DAG2      <------MYB46(1)         --------->ARR11(1) --->ZmHOX2a(1)   <---------TOE1(3)       ---------->DOF2      <------MYB83            --------->ARR11(3) ===============HOX2a_HOX2a     <---------------AtSPL8      <------ZmHOX2a(1)        ----------->ARR10   cttcagatggatctgatttgaaggatacgtggaaggagtactcaaaaagtgaggagacagaaggatggtatacaggtgaagggttcgaagatatgcatct  3064200                                                                    ------>ZmHOX2a(2)                                                                 <------ZmHOX2a(1)              -----                          <---------TOE2(3)             <---------ANAC58              ------>ZmHOX2a(2)                <------MYB46(1)                         <---------ANAC46  <---------TOE2(3)    <-----                ----------->GT1               ---------->DOF2    ============================HOX2a_HOX2a                <------MYB83              <---------ANAC46     <---------TOE2(3)    <---------ARR14(2)               <---------MYB46(3)  <-------TEIL         <---------ANAC58 <-----------GT1  <----------DOF2 ---------TOE2(3)         <---------TOE1(3) ----------->HVH21---------->DOF2        --------->ARR14(2)   tcaaggtagaagatgggctggtaaaattaaggctacgttcaattctgtgaaagggatggcttataaaggatcgatttacgatgctggatcgacttttgaa  3064300  Previous    Next  AGI:  At3g09960.1    Description:  calcineurin-like phosphoesterase family protein. similar to calcineurin-like phosphoesterase family protein [Arabidopsis thaliana] (TAIR:AT3G09970.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15950.1); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843); contains InterPro domain Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase; (InterPro:IPR006186) Range:  from: 3061957    to: 3063599    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g09970.1    Description:  calcineurin-like phosphoesterase family protein. similar to calcineurin-like phosphoesterase family protein [Arabidopsis thaliana] (TAIR:AT3G09960.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15950.1); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843); contains InterPro domain Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase; (InterPro:IPR006186) Range:  from: 3063779    to: 3065580    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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