Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    --------->YAB1                                                                             ------>ZmHOX2a(2)                                                                            <------ZmHOX2a(2)                                                                            --------->CCA1(2)                   ----------->GT1                                         >>>>>>>>>GATA-3                  --------->DAG2                                           <---------ARR11(3)                ---------->DOF2                                            --------->AGP1     <---------AHL20(1)                                                    >>>>>>>>>GATA-2     --------->AHL20(2)                                                    --------->ARR11(3)     <---------AHL20(2)                  --------->ANAC58                  >>>>>>>>>GATA-4     --------->AHL20(1)    --------->CCA1(2)                               >>>>>>>>>GATA-1 >At5g28300  --------->ANAC58            --------->ANAC58                 --------->GLK1(1)       --- ->GT1       --------->ANAC58          ---------->DOF2               ---------->DOF2     ---------->DOF2   actatattttattgaacggaaaggttaatatatgcaaaatccaaagccaaacttatatagataacataacataaagagatctaatgaaaactaaagaata  3060200                                                               --------->GLK1(1)                                                               <---------GLK1(1)                                                       <--------P                                                      <---------MYB52(1)                                                     --------->LBD16            <---------CCA1(2)                                 <----------DOF2   <---------LBD16    <---------MYB52(1)          ---                              <---------ARR11(3) --------->ARR14(2)  --------->LBD16            -----                              --------->ARR11(3) <---------ARR14(2) --------->LBD16            <-----                      --------->AHL20(1)        <---------GLK1(1)  <---------LBD16        <---------- -------->GT1      --------->AHL20(2)  ----------->HVH21   <---------WOX13(1)   <---------At4g35610   tagtagaaatcaaattactaaaaatatactaaaatctttttgtgacatatatatccggtagattgatatcccggtttttgtcatctcttccaatgttgta  3060300                                                          <---------YAB1                                                       <---------ATHB51                                                 XXXXXXXXXXXXXXXXXXXX>MIR774B ------>ZAT6<---------MYB52(1)                  <XXXXXXXXXXXXXXXXXXXXMIR774B*    --------->ALFIN1 -->TEIL   <-------GAMYB                        --------->At4g35610          ---------->DOF2 ----CCA1(2)<<<<<<<<<MYB98                    <------ZmHOX2a(1)  <---------bZIP60(2) -RAV1(1) --------->ANAC46          <---------ARR11(3) --------->ICU4------>NtERF2          ---------   tctctacaatctccgttactcttaagaaatataaacaagataaatgaaggagatgaaattatgggtgatgaggccatataaaagtgtcgattgcaaaagc  3060400                                                        --------->GLK1(1)                                                    --------->ANAC58                                         --------->ARR14(2)                                         <---------ARR14(2)                                      --------->ANAC55(2)<---------ARR14(2)                ------>ZmHOX2a(1)                           --------->ANAC58         --------->ANAC58         XXXXXXXXXXXXXXXXXXXXX>MIR831                           --------->ANAC58   --------->LBD16      <---------ALFIN1--------->YAB1   < ->DOF2            <---------YAB1     <---------ANAC55(2)--------->ARR14(2)  <---------CCA1(2)<------   tcgcttctcatggagagtattgtcatggaaggcaagaagtccgtattccgagagaagcaaatccaatctccactcttccatctcttcataatcctccttt  3060500                                                 --------->ANAC46                 <---------ANAC58                                                 --------->ANAC58              <----------DOF2                                                 --------->ANAC55(2)      <---------ALFIN1                                             <----------DOF2         --------->GLK1(2)                                    <---------ANAC58                <---------ARR11(3)                  ------->GAMYB ------>MYB83<----------DOF2         <---------GLK1(2) --------->ARR11(3)             ------>MYB46(1)  --------->ANAC58 ----------->ARR10 <---------ARR14(2)            <---------ALFIN1 --------->RAP2.6(3) --------->ARR14(2) --------->ARR14(2)   --------->At4g35610 ------>NtERF2  <---------MYB52(1) <---------ALFIN1  <------ ------->TEIL    --------->ANAC58   ----------------------->TaNAC69(2) <-----------GT1        <------ ---------CCA1(2)--------->ANAC58   <---------ANAC58  <------NtERF2 <---------ARR14(2)        <------ ----DOF2      --------->MYB52(1)   <---------ANAC46 ------>NtERF2--------->ICU4  <---------ANAC58   gtgtatcttgggtaatgcaacggcatcttaaacccactgcttggggcctttacggcaccgtttttgtcaagattctccacactttcttgatttttggcat  3060600                                                                                <---------ZAT18                    <---------MYB55(2)                                         <---------ANAC46                    <---------ALFIN1                                           <---------ANAC58                    --------->MYB46(3)                                         <---------ANAC58                   -------->P                                              <---------ANAC58      ----------->GT1------->GAMYB                                         <---------ANAC46    ---------->DOF2------>MYB46(1)                                    <-----------RAV1(1)          <- ---ANAC58         ------>MYB83       *TSS                        <------------CBF     <-----------TBP ---AtLEC2    --------->ANAC58   <---------CCA1(2)              ------>ZmHOX2a(2)    <-----------TBP ---ANAC58    --------->ANAC58 <---------ALFIN1             <---------YAB1 <---------ANAC58       ---   ggttcagaaagttaagaagccaaccccccttccccatctctctctctcgttttttttggtttatgatcgattgtgttgcttgtgtgcttatatatagaga  3060700                     --------->ANAC58                                             --------->AHL20(2)                     --------->ANAC58                                             <---------AHL20(2)                   --------->MYB52(1)                     --------->AHL20(2)  =======================           --------->ANAC55(2)                            <---------AHL20(2)  --------------->AGL15           <---------ANAC55(2)                      <-------TEIL           <-----------GT1   --------           <---------ANAC58                      ----------->GT1     <---------AHL20(2)     ------>NtERF2           <---------ANAC58                     --------------->AtSPL8   <---------ICU4    <---------ALFIN1           <---------ANAC46----------->HVH21    <---------------AtSPL8--------->YAB1    --------->ANAC58           <---------ANAC55(1)               ---------->DOF2         --------->AHL20(2) --------->ANAC58 --------At5g28300--------->ARR14(2)        <---------AHL20(2)     --------->TOE2(3)    --------->ANAC46 ------>MYB52(1)  <---------ARR14(2) <---------ANAC55(2) --------->YAB1  --------->YAB1XXXXXXXXXXXXXX   ttacggtgagattacgtgaagaaacggaaatgacacattacatgaattaaagggtacaattttaatccacattaattataccatttatataagccacctc  3060800                                                                                              <------                                                     <---------RVE1(1)                     --------->ARR11(3)                                                     <---------CCA1(1)        <---------------AGL15                                                    <---------ARR14(2)        --------------->AGL15                                                    <---------ARR11(3)       <----------ID1<---------ARR11(3)                                                    --------->ARR11(3)       <-----------------AG              --------->ANAC58              -------->ATHB1                   ----------------->AGL2              --------->ANAC58              --------->ATHB12                 <-----------------AGL2          <---------TOE2(3)                 --------->YAB1                   <-----------------AGL1         ---------->DOF2                    <---------ICU4                   ----------------->AGL1        --------->AHL20(2)                 --------->ICU4        --------->ICU4  ---------->DOF2 =============================================================================================MADS_MADS ->bZIP60(2)  --------->ANAC46             <---------YAB1   ----------->GT1  ----------------->AG   - XXXXXX>MIR844*  ----------->RAV1(1)       <---------ATHB12 --------->YAB1   ========================   atgagttcgattaaagaagcaacaaggggaatgaattgggttttaatcattgaagatatttatcgtaattaagaacaataccacaaaggggaagagcttt  3060900                                                        <---------ZAT18                                                        --------->ZAT18              <---------ANAC58                                                <---------ANAC46                     <---------ANAC55(1)                                                <------MYB46(1)                      <---------ANAC58                                                <------MYB83                         <---------ANAC46                                               <---------AtMYB61                     <---------ANAC55(2)                                               <---------MYB46(3)                    --------->ANAC55(2)       ---------->DOF2   <---------AHL20(2)    --------->MYB55(2)         --------->ATHB12  ---------->DOF2<---------ANAC46              --------->MYB46(2)        <---------YAB1 ----DOF2--------->ICU4 --------->AHL20(2)    <---------MYB55(1)       --------------->AGL15 -------- -------->YAB1 <---------ANAC46 <--------P   <---------MYB52(1) <---------YAB1   <---------GLK1(1) ======================================================================================MADS_MADS<----   tatcaaaagaaaagatgatgtgtgtataaaattggtaagttagtaacgtttggtgaagagcacattattttagccatgaatggaattgcgtgagtaagtt  3061000                       <---------YAB1                     <---------ICU4                     --------->YAB1                     -------->HAHB4                    --------->ICU4                                                --------->DEAR3(1)                    <---------ATHB51                                          ----------->HVH21               --------->ANAC55(2)                                            --------->TGA2(2)               <---------ANAC55(2)                                           <-----------TGA1               --------->ANAC46                                              <-----------HVH21               --------->ANAC58                                             --------->ANAC55(1)               --------->ANAC55(1)                                          <---------ANAC55(2)               --------->ANAC58                                             --------->ANAC58              ------->TEIL           <---------YAB1                         --------->ANAC55(2)           <---------REM1(1)   <---------YAB1             --------->ZAT14   --------->ANAC46          --------------->AtSPL3   --------->YAB1         <---------ZAT18   --------->ANAC58          --------------->AtSPL8   <-----------GT1        <---------ZAT14  <-------TEIL          <---------------AtSPL8--------->YAB1        <-----------GT1      <-----------STF1       <------ZmHOX2a(1)     --------->YAB1          <---------YAB1       <-----------GT1        <--- --->GT1  <---------------AtSPL3<---------ICU4    <---------AHL20(2)     --------->ARR14(2)    ------ -----AHL20(2)<-------TEIL------->TEIL            <---------YAB1         <---------ARR14(2)   <------   aattaagaaggagatgtacgtaattatgaatttataatcacgattcacgaatattattactgcagtctggctgtatatacgtcaccgtctcattcaatta  3061100  Previous    Next  AGI:  At3g09950.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G55620.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G55570.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39940.1) Range:  from: 3060095    to: 3060638    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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